KEGG   Pan troglodytes (chimpanzee): 463308
Entry
463308            CDS       T01005                                 
Symbol
HOXA1
Name
(RefSeq) homeobox protein Hox-A1 isoform X1
  KO
K09301  homeobox protein HoxA/B/D1
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    463308 (HOXA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ptr03000]
    463308 (HOXA1)
Transcription factors [BR:ptr03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain ANTP: HOXL
    463308 (HOXA1)
SSDB
Motif
Pfam: Homeodomain Homeobox_KN
Other DBs
NCBI-GeneID: 463308
NCBI-ProteinID: XP_016801050
Ensembl: ENSPTRG00000019010 ENSPTRG00000048196
VGNC: 4389
UniProt: H2QUB3 A0A6D2XYY7
Position
7:complement(27209585..27212980)
AA seq 335 aa
MDNARMNSFLEYPILSSGDSGTCPARAYPSDHGITTFQSCAVSANSCGGDDRFLMGRGVQ
IGSPHHHHHHHHHHPQPATYQTSGNLGVSYSHSSCGPSYGSQNFSAPYSPYALNQEADVS
GGYPQCAPAVYSGNLSSSMVQHHHHHQGYAGGAVGSPQYIHHSYGQEHQSLALATYNNSL
SPLHASHQEACRSPASETSSPAQTFDWMKVKRNPPKTGKVGEYGYLGQPNAVRTNFTTKQ
LTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREKEGLLPISPATP
PGNDEKAEESSEKSSSSPCVPSPGSSTSDTLTTSH
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggacaatgcaagaatgaactccttcctggaataccccatacttagcagtggcgactcg
gggacctgcccagcccgagcctacccctcggaccatgggattacaactttccagtcgtgc
gcggtcagtgccaacagttgcggcggcgacgaccgcttcctaatgggcaggggggtgcag
atcggttcgccccaccaccaccaccaccaccaccatcaccacccccagccggctacctac
cagacttccgggaacctgggggtgtcctactcccactcgagttgtggtccaagctatggc
tcacagaacttcagtgcgccttacagcccctacgcgttaaatcaggaagcagacgtaagt
ggtgggtacccccagtgcgctcccgctgtttactctggaaatctctcatcttccatggtc
cagcatcaccaccaccaccagggttatgctgggggcgcggtgggctcgcctcaatacatt
caccactcatatggacaggagcaccagagcctggccctggctacgtataataactccttg
tcccctctccacgccagccaccaagaagcctgtcgctcccctgcatcggagacatcttct
ccagcgcagacttttgactggatgaaagtcaaaagaaaccctcccaaaacagggaaagtt
ggagagtacggctacctgggtcaacccaacgcggtgcgcaccaacttcactaccaagcag
ctcacggaactggagaaggagttccacttcaacaagtacctgacgcgcgcccgcagggtg
gagatcgctgcatccctgcagctcaacgagacccaagtgaagatctggttccagaaccgc
cgaatgaagcaaaagaaacgtgagaaggagggtctcttgcccatctctccggccaccccg
ccaggaaacgacgagaaggccgaggaatcctcagagaagtccagctcttcgccctgcgtt
ccttccccggggtcttctacctcagacactctgactacctcccactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (2)   
   OC (1)   
   VGNC (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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