KEGG   Pan troglodytes (chimpanzee): 464230
Entry
464230            CDS       T01005                                 
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
  KO
K04984  transient receptor potential cation channel subfamily A member 1
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr04750  Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09150 Organismal Systems
  09157 Sensory system
   04750 Inflammatory mediator regulation of TRP channels
    464230 (TRPA1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ptr04040]
    464230 (TRPA1)
Ion channels [BR:ptr04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   464230 (TRPA1)
SSDB
Motif
Pfam: Ank_2 Ank Ank_4 Ank_3 Ank_5 Ion_trans PKD_channel
Other DBs
NCBI-GeneID: 464230
NCBI-ProteinID: XP_519806
Ensembl: ENSPTRG00000020340
VGNC: 7602
UniProt: A0A6D2WBD8 H2R465
Position
8:complement(70130638..70184834)
AA seq 1119 aa
MKCSLRKMWRPGEKKEPQGVVYEDVPDDTEDFKESLKVVFEGSAYGLQNFNKQKKLKRCD
DMDTFFLHYAAAEGQIELMEKITRDSSLEVLHEMDDYGNTPLHCAVEKNQIESVKFLLSR
GANPNLRNFNMMAPLHIAVQGMNNEVMKVLLEHRTIDVNLEGENGNTAVIIACTTNNSEA
LQILLNKGAKPCKSNKWGCFPIHQAAFSGSKECMEIILRFGEEHGYSRQLHINFMNNGKA
TPLHLAVQNGDLEMIKMCLDNGAQIDPVEKGRCTAIHFAATQGATEIVKLMISSYSGSVD
IVNTTDGCHETMLHRASLFDHHELADYLISVGADINKIDSEGRSPLILATASASWNIVNL
LLSKGAQVDIKDNFGRNFLHLTVQQPYGLKNLRPEFMQMQQIKELVMDEDNDGCTPLHYA
CRQGGPGSVNNLLGFNVSIHSKSKDKKSPLHFAASYGRINTCQRLLQDISDTRLLNEGDL
HGMTPLHLAAKNGYDKVVQLLLKKGALFLSDHNGWTALHHASMGGYTQTMKVILDTNLKC
TDRLDEDGNTALHFAAREGHAKAVALLLSHNADIVLNKQQASFLHLALHNKRKEVVLTII
RSKRWDECLKIFSHNSPGNKCPITEMIEYLPECMKVLLDFCMLHSTEDKSCRDYYIEYNF
KYLQCPLEFTKKTPTQDVIYEPLTALNAMVQNNRIELLNHPVCKEYLLMKWLAYGFRAHM
MNLGSYCLGLIPMTILVVNIKPGMAFNSTGIINETSDHSEILDTTNSYLIKTCMILVFLS
SIFGYCKEAGQIFQQKRNYFMDMSNVLEWIIYTTGIIFVLPLFVEIPAHLQWQCGAIAVY
FYWMNFLLYLQRFENCGIFIVMLEVILKTLLRSTVVFIFLLLAFGLSFYILLNLQDPFSS
PLLSIIQTFSMMLGDINYRESFLEPYLRNELAHPVLSFAQLVSFTIFVPIVLMNLLIGLA
VGDIAEVQKHASLKRIAMQVELHTSLEKKLPLWFLRKVDQKSTIVYPNKPRSGGMLFHIF
CFLFCTGEIRQEIPNADKSLEMEILKQKYRLKDLTFLLEKQHELIKLIIQKMEIISETED
DDSHCSFQDRFKKEQMEQRNSRWNTVLRAVKAKTHHLEP
NT seq 3360 nt   +upstreamnt  +downstreamnt
atgaagtgcagcctgaggaagatgtggcgccctggagaaaagaaggagccccagggcgtt
gtctatgaggatgtgccggacgacacggaggatttcaaggaatcgcttaaggtggttttt
gaaggaagtgcatatggattacaaaactttaataagcaaaagaaattaaaaagatgtgat
gatatggacaccttcttcttgcattatgctgcagcagaaggccaaattgagctaatggag
aagatcaccagagattcctctttggaagtgctgcatgaaatggatgattatggaaatacc
cctctgcattgtgctgtagaaaaaaaccaaattgaaagcgttaagtttcttctcagcaga
ggagcaaacccaaacctccgaaacttcaacatgatggcgcctctccacatagctgtgcag
ggcatgaataatgaggtgatgaaggtcttgcttgagcatagaactattgatgttaatttg
gaaggagaaaatggaaacacagctgtgatcattgcgtgcaccacaaataatagcgaagca
ttgcagattttgcttaacaaaggagctaagccatgtaaatcaaataaatggggatgtttc
cctattcaccaagctgcattttcaggttccaaagaatgcatggaaataatactaaggttt
ggtgaagagcatgggtacagtagacagttgcacattaactttatgaataatgggaaagcc
acccctctccacctggctgtgcaaaatggtgacttggaaatgatcaaaatgtgcctggac
aatggtgcacaaatagacccagtggagaagggaaggtgcacagccattcattttgctgcc
acccagggagccactgagattgttaaattgatgatatcgtcctattctggtagcgtggat
attgttaacacaaccgatggatgtcatgagaccatgcttcacagagcttcattgtttgat
caccatgagctagcagactatttaatttcagtgggagcagatattaataagatcgattct
gaaggacgctctccacttatattagcaactgcttctgcatcttggaatattgtaaatttg
ctactctctaaaggtgcccaagtagacataaaagataattttggacgtaattttctgcat
ttaactgtacagcaaccttatggattaaaaaatctgcgacctgaatttatgcagatgcaa
cagatcaaagagctggtaatggatgaagacaacgatgggtgtactcctctacattatgca
tgtagacaggggggccctggttctgtaaataacctacttggctttaatgtgtccattcat
tccaaaagcaaagataagaaatcacctctgcattttgcagccagttatgggcgtatcaat
acctgtcagaggctcctacaagacataagtgatacgaggcttctgaatgaaggtgacctt
catggaatgactcctctccatctggcagcaaagaatggatatgataaagtagttcagctt
cttctgaaaaaaggtgcattgtttctcagtgaccacaatggctggacagctttgcatcat
gcgtccatgggcgggtacactcagaccatgaaggtcattcttgatactaatttgaagtgc
acagatcgcctggatgaagacgggaacactgcacttcactttgctgcaagggaaggccac
gccaaggccgttgcgcttcttctgagccacaacgctgacatagtcctgaacaagcagcag
gcctcctttttgcaccttgcacttcacaataagaggaaggaggttgttcttacgatcatc
aggagcaaaagatgggatgaatgtcttaagattttcagtcataattctccaggcaataaa
tgtccaattacagaaatgatagaatacctccctgaatgcatgaaggtacttttagatttc
tgcatgttgcattccacagaagacaagtcctgccgagactactatattgagtataatttc
aaatatcttcaatgtccattagaattcaccaaaaaaacacctacacaggatgttatatat
gaacctcttacagccctcaatgcaatggtacaaaataaccgcatagagcttctcaatcat
cctgtgtgtaaagaatatttactcatgaaatggttggcttatggatttagagctcatatg
atgaatttaggatcttactgtcttggtctcatacctatgaccattctcgttgtcaatata
aaaccaggaatggctttcaactcaactggcatcatcaatgaaactagtgatcattcagaa
atactagataccacgaattcatatctaataaaaacttgtatgattttagtgtttttatca
agtatatttgggtattgcaaagaagcggggcaaattttccaacagaaaaggaattatttt
atggatatgagcaatgttcttgaatggattatctacacgacgggcatcatttttgtgctg
cccttgtttgttgaaataccagctcatctgcagtggcaatgtggagcaattgctgtttac
ttctattggatgaatttcttattgtatcttcaaagatttgaaaattgtggaatttttatt
gttatgttggaggtaattttgaaaactttgttgaggtctacagttgtatttatcttcctt
cttctggcttttggactcagcttttacatcctcctgaatttacaggatcccttcagctct
ccattgctttctataatccagaccttcagcatgatgctaggagatatcaattatcgagag
tccttcctagaaccatatctgagaaatgaattggcacatccagttctgtcctttgcacaa
cttgtttccttcacaatatttgtcccaattgtcctcatgaatttacttattggcttggca
gttggtgacattgctgaggtccagaaacatgcatcattgaagaggatagctatgcaggtg
gaacttcataccagcttagagaagaagctgccactttggtttctacgcaaagtggatcag
aaatccaccatcgtgtatcccaacaaacccagatctggtgggatgttattccatatattc
tgttttttattttgcactggggaaataagacaagagataccaaatgctgataaatcttta
gaaatggaaatattaaagcagaaataccggctgaaggatcttacttttctcctggaaaaa
cagcatgagctcattaaactgatcattcagaagatggagatcatctctgagacagaggat
gatgatagccattgttcttttcaagacaggtttaagaaagagcagatggaacaaaggaat
agcagatggaatactgtgttgagagcagtcaaggcaaaaacacaccatcttgagccttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (7)   
   Pfam (7)   
All databases (27)   

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