KEGG   Pan troglodytes (chimpanzee): 465289
Entry
465289            CDS       T01005                                 
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3
  KO
K06099  cold shock domain protein A
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr04530  Tight junction
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    465289 (YBX3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ptr03000]
    465289 (YBX3)
   03041 Spliceosome [BR:ptr03041]
    465289 (YBX3)
Transcription factors [BR:ptr03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   Cold-shock domain factors, DbpA-like
    465289 (YBX3)
Spliceosome [BR:ptr03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    465289 (YBX3)
SSDB
Motif
Pfam: CSD Herpes_LMP1 OB_RNB
Other DBs
NCBI-GeneID: 465289
NCBI-ProteinID: NP_001267203
Ensembl: ENSPTRG00000004681
VGNC: 5653
UniProt: G2HEQ6
Position
12:complement(10908544..10932912)
AA seq 374 aa
MSEAGEATTTTTTTTTLPQAPTEAAAAAPQDPAPKSPVGSGAPQAAAPAPAAHVAGNPGG
DAAPAATGTAAAASLATAAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFV
HQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYR
RGYYGRRRGPPRNYAGEEEEEGSGSSEGFDPPAIDRQFSGARNQLRRPQYRPQYRQRRFP
PYHVGQTFDRRSRVLPHPNRIQAGEIGEMKDGVPEGAQLQGPVHRNPTYRPRYRSRGPPR
PRPAPAVGEAEDKENQQATSGPNQPSVRRGYRRPYNYRRRPRPPNAPSQDGKEAKAGEAP
TENPAPPTQQSSAE
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgagtgaggcgggcgaggccaccaccaccaccaccaccaccaccaccctcccgcaggct
ccgacggaggcggccgccgcggctccccaggaccccgcgcccaagagcccggtgggcagc
ggtgcgccccaggccgcggccccggcgcccgccgcccacgtcgcaggaaaccccggtggg
gacgcggcccccgcagccacgggcaccgcggccgccgcctctttagccaccgccgccggc
agcgaagacgcggagaaaaaagttctcgccaccaaagtccttggcactgtcaaatggttc
aacgtcagaaatggatatggatttataaatcgaaatgacaccaaagaagatgtatttgta
catcagactgccatcaagaagaataacccacggaaatatctgcgcagtgtaggagatgga
gaaactgtagagtttgatgtggttgaaggagagaagggtgcagaagctgccaatgtgact
ggcccggatggagttcctgtggaagggagtcgttacgctgcagatcggcgccgttacaga
cgtggctactatggaaggcgccgtggccctccccggaattacgctggggaggaggaggag
gaagggagcggcagcagtgaaggatttgacccccctgccattgataggcagttctctggg
gcccggaatcagctgcgccgcccccagtatcgccctcagtaccggcagcggcggttcccg
ccttaccacgtgggacagacctttgaccgtcgctcacgggtcttaccccatcccaacaga
atacaggctggtgagattggagagatgaaggatggagtcccagagggagcacaacttcag
ggaccggttcatcgaaatccaacttaccgcccaaggtaccgtagcaggggacctcctcgc
ccacgacctgccccagcagttggagaggctgaagataaagaaaatcagcaagccaccagt
ggtccaaaccagccgtctgttcgccgtggataccggcgtccctacaattaccggcgtcgc
ccgcgtcctcctaacgctccttcacaagatggcaaagaggccaaggcaggtgaagcacca
actgagaaccctgctccacccacccagcagagcagtgctgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (20)   
   RefSeq(nuc) (2)   
   GenBank (9)   
   EMBL (9)   
Protein domain (3)   
   Pfam (3)   
All databases (37)   

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