KEGG   Photorhabdus thracensis: VY86_02695
Entry
VY86_02695        CDS       T03944                                 
Name
(GenBank) tRNA s(4)U8 sulfurtransferase
  KO
K03151  tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
Organism
ptt  Photorhabdus thracensis
Pathway
ptt00730  Thiamine metabolism
ptt01100  Metabolic pathways
ptt01240  Biosynthesis of cofactors
ptt04122  Sulfur relay system
Module
ptt_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:ptt00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    VY86_02695
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    VY86_02695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ptt03016]
    VY86_02695
Enzymes [BR:ptt01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.4  tRNA uracil 4-sulfurtransferase
     VY86_02695
Transfer RNA biogenesis [BR:ptt03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    VY86_02695
SSDB
Motif
Pfam: ThiI THUMP Rhodanese QueC Diphthami_syn_2 tRNA_Me_trans Asn_synthase
Other DBs
NCBI-ProteinID: AKH62407
UniProt: A0A0F7LKN9
Position
670539..671987
AA seq 482 aa
MKFIIKLFPEITIKSQTVRLRFIKILASNIRNVLKALGDNIAVVRHWDNIEVRTKDENLG
AQICDALTRIPGIHHILQVEEREFRDMHHIFEQAYEAYGESLHNKTFCVRVKRRGKHAFT
SNEVERYVGGGLNQHIESAKVKLTHPDVTVNLEIDQDMLILVKARYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGSAHEIGVKQVAHYLWNRFGSSHKVRFV
AVDFEPVVAEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQAIVTGEALGQVSSQTLTN
LRLIDNASDTLILRPLISHDKEHIIKLAREIGTEDFARTMPEFCGVISKSPTVKAVKAKI
EAEEVNFDFDILEKVISEAQNIDIRQIAEQSSERVVEVETVTEFASTDVLLDIRSPDEQD
DRPLQMNGVEIKSLPFYKLSSQFGDLPKEKTYLLYCERGVMSRLQALYLCEQGFDNVKVY
RP
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgaagtttattattaaattattcccagaaatcacgattaagagccagactgtccgtttg
cgctttattaaaattctcgccagtaatattcgcaatgtgctcaaagcattgggagataat
attgcggtagttcgccattgggataatatcgaagttcgtactaaagatgaaaaccttggc
gctcaaatttgtgatgcgttgacacgtattcccggtattcaccatattctgcaagtagaa
gagcgtgaatttcgtgatatgcatcatatctttgaacaagcttatgaggcttatggtgaa
tcgctccataacaaaacattttgtgtacgggttaaacgtcgtggtaaacatgcgtttact
tctaatgaagtagaacgctatgtcggtggtggtttaaaccagcacattgaatctgcgaaa
gtaaaactgactcatcctgatgttaccgttaatctggaaattgatcaggatatgttgatt
ctggtgaaagcccgttatgaaggaattggcggttttcctatcggaacgcaggaagatgtg
ctgtctctgatttctggcggttttgattctggtgtttccagctatatgttgatgcgccgt
ggctgccgtgttcattattgtttctttaatcttggtggctctgctcatgaaattggtgtg
aagcaggtcgctcattatctttggaaccgctttggcagttcccataaagtccgtttcgtt
gctgtggattttgaacctgtagtcgctgaaattctggaaaaagttgatgacggccaaatg
ggtgtggtgcttaaacggatgatggtaagagcggcatctaaagttgcagaacgctatggc
gtgcaggccattgttaccggtgaggcgttgggacaggtttccagccagacgctgactaat
ctgcgtttgattgataatgcatcggatactttgattctacggccgctgatttctcatgat
aaagagcacattatcaaactggcacgtgaaattggcactgaggattttgcccgtacgatg
cctgagttttgtggggttatttctaaaagtccgactgtaaaagcggttaaagccaaaatt
gaagcagaagaggttaatttcgattttgatattctggaaaaggttatcagtgaagctcag
aatattgatatccgtcagatcgcagaacaaagcagtgagcgagtcgttgaagttgaaaca
gtcactgaatttgcttcaacagatgtattactggatattcgctcacctgatgaacaagat
gatcgcccattgcagatgaatggcgtagaaatcaaatcattgccgttctataaattaagc
agtcagtttggtgatttacctaaagagaaaacttatctgctctattgtgagcgcggagtg
atgagccgtttacaggcactttatctgtgtgaacagggatttgataatgtgaaagtttat
cggccttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (30)   

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