KEGG   Pelosinus sp. UFO1: UFO1_2618
Entry
UFO1_2618         CDS       T03211                                 
Name
(GenBank) DNA polymerase LigD, ligase domain protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
puf  Pelosinus sp. UFO1
Pathway
puf03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:puf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    UFO1_2618
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:puf03400]
    UFO1_2618
Enzymes [BR:puf01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     UFO1_2618
DNA repair and recombination proteins [BR:puf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     UFO1_2618
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme RNA_ligase GAAD DNA_ligase_OB_2
Other DBs
NCBI-ProteinID: AIF52161
UniProt: A0A075KDC1
Position
2749862..2750842
AA seq 326 aa
MQFIKPMLAKQGKLPTDDNQYGFEIKWDGMRCILYHINNEIVLRSRNQKDITSQYPELQE
LGTILNGQQVILDGEIIVLDTNGRPSFSLLQHRMGLSSPIVIAKKRQEIPVTYISFDILY
LNNKYLMDLPYTERRHILDKLELSSTNLQVPAYQLGNGKEIQKAVSDLGLEGIIAKRLIS
HYLPGKRSDDWLKIKNNHRQEFVIGGWLPGKGQRSEGIGSLVLGYYDMTPKQAEVENKEP
QFLYAGKVGTGFTKDLLQKLLAMLTPLKRDSSPFSTDIPPKDTVFVEPQIIGEFEFTEWT
PNNTLRHPSFKGLRYDKAASFVIKES
NT seq 981 nt   +upstreamnt  +downstreamnt
atgcagtttataaaacccatgttagcaaaacaaggtaaactacccacggatgacaatcaa
tatggtttcgaaattaaatgggatggcatgcgctgcattctctaccatataaataacgaa
attgtattaagaagccgcaatcaaaaagatattacatctcaatatccggaactccaagaa
ttaggaacaatactgaacggacagcaagtgatactcgatggggagattattgtcttagat
acaaatggacggccatccttttctttattacaacatcgaatgggccttagctcccctatt
gtcattgctaaaaaaaggcaggagatacctgtaacttatatttccttcgatatactttac
ctcaacaataaatatttaatggaccttccctatacagagcgacgccacatacttgataaa
ctagaactttctagtacaaatttgcaggttccagcttatcaattaggaaatggcaaagaa
atacaaaaggccgtttctgatctaggtttggaaggaattatagccaaacggcttattagt
cattatttacctggcaaacgaagtgacgattggttaaagataaaaaataaccatcgtcaa
gaattcgtaattggtggttggttaccaggcaaaggtcaacgctctgaaggtatcggttca
ttagtattaggctattacgatatgacacctaagcaagcagaagttgaaaataaagagcca
caatttctctatgctggtaaggtaggtaccggtttcactaaagatctactccaaaagttg
ttagctatgttaactcctcttaagcgagatagtagtcccttttccactgatatcccccca
aaagacacagtctttgttgagccccaaataatcggtgagtttgaatttaccgagtggacg
ccaaataacactctccggcacccttcttttaaaggcctgcgttacgataaagcggcatcc
tttgtaataaaagaaagttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system