KEGG   Paenibacillus vortex: PVOR_26523
Entry
PVOR_26523        CDS       T05385                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
pvo  Paenibacillus vortex
Pathway
pvo03030  DNA replication
pvo03430  Mismatch repair
pvo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pvo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PVOR_26523
   03430 Mismatch repair
    PVOR_26523
   03440 Homologous recombination
    PVOR_26523
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvo03032]
    PVOR_26523
   03400 DNA repair and recombination proteins [BR:pvo03400]
    PVOR_26523
Enzymes [BR:pvo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PVOR_26523
DNA replication proteins [BR:pvo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PVOR_26523
DNA repair and recombination proteins [BR:pvo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PVOR_26523
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DUF655 DUF6282 VPS13_mid_rpt
Other DBs
NCBI-ProteinID: EFU39157
UniProt: A0A2R9SP46
Position
complement(84023..87454)
AA seq 1143 aa
MSSFVHLHVHSEYSLLDGAARIGDLVREAAALGMKSLALTDHGVMYGAIPFYKACLAQGI
KPIIGCEAYITAGSRKERGSRKDQPIYHLILLAKNEVGYRNLMKLSSIGHLEGYHYRPRI
DMEALAAHHEGIICLSACLGGEVPQHLLHGREAEAKAAALRYQAIFGDDYYLELQDHGIP
EQKRVNPQLIALSRETGIPLVATNDVHYLTEEDAEVQDVLICIGTGKTVEDEDRLQIQTN
QLYLKSGSEMERLYPHVPEAIQNTAKIADQCNLELEFGKSILPEYSSLPEGKNAAEYLRE
LCLNGLQERYGITERWQDEALRSELEQRLNYELGVIENMGFSDYFLIVWDFIAYAHRQGI
AVGPGRGSSAGSLVAYTLQITNVDPMKYKLLFERFLNPERITMPDIDIDFSDERRDEVID
YVVDKYGKEHVAQIITFGTMAARAAVRDVGRALNVPFGDVDKAAKLIPNHLGISIAKAME
QSPQLKEQYETRPKVRELIDMAMKVEGMPRHASTHAAGIVISRDPLTDAVPLQEGSEKTA
LTQYSMENLESVGLLKMDFLGLRTLSIIERTLKWIQELTGGALDFEQIPDNDGNTYEMLG
RGETTGVFQLESAGVRRVLKDLKPSAFEDIVSVVALYRPGPMEFIPRFIQVKHGQIDPEY
PHEDLIPILGDTYGIIVYQEQIMQIASTMAGFSLGEADLLRRAVSKKKREVLDRERSHFV
SGSLKLGYSEDEANRVYDMIVRFANYGFPRAHAAAYGVLAFQTAYLKAHYPVPFMASMLT
AVMGSHRKVAEYVLEARRIDIEVMPPDVNESGTYFTPVVSQSESGSLDEGSHHFTEGGIR
FGLAAIKNVGTQAVENIVEIRREKPFESLLDFCRRVDLRVCNKRVIESLIQAGAFDSLPG
HRSQLVAMLDETVEAAVKWRKERDDLQIQLFDFVEATNWDIEYPDIPPYTAGQQLEFERE
LLGMYLSGHPLDGYEDTLTESGADRLMDLHEAADESMAAVAGMVVTLKTITTKQGKAMAF
MECEDQIERCEVVLFPEVWKRSAHLIEKGALLAIRAKVQLQDEGFKLLAEEVAPLEAQTL
RQLVQRSKVRGAAGGGEGQSRGTRIRQRRGWKIGSGSVRSTAGFHRSAIGRAGRDPGEHH
EWR
NT seq 3432 nt   +upstreamnt  +downstreamnt
atgagctctttcgtgcatttgcacgtgcatagcgaatacagtttgctcgatggagcggca
cgtatcggtgacctggtgcgggaagcggcagcgcttggaatgaaatcgctggcgctgacg
gatcatggcgtgatgtatggggccattccattctataaagcctgcctggcgcagggcatt
aaaccgattattggctgcgaagcctatattacggcgggttcccgcaaggaacggggcagc
cggaaggatcagccgatctatcacttgattctgctcgccaagaatgaggttggctatcgc
aatttaatgaagctcagttcgatcgggcatctggagggttaccattacagaccccgaatc
gacatggaggcgctggctgcccatcatgaaggcatcatatgcctcagtgcttgcctggga
ggcgaggtcccgcagcatctgcttcatggacgtgaagcggaagccaaggcagcagcgctt
cgttaccaggcgatattcggagatgactattacctggagctgcaggatcacgggattccg
gagcagaagcgcgtcaatccgcagctgatcgcgctcagccgtgagacgggtattccactc
gtagctaccaatgatgtgcattacctcacggaggaagatgccgaggttcaagatgttctg
atctgtatcggtacgggcaaaacggtggaggacgaggaccggctgcaaatccagaccaac
cagctgtatctcaagagcggcagtgaaatggagcgtctgtacccccatgtgccggaagcg
atacagaatacagccaagattgcggaccaatgcaatctggagctcgaattcggcaaatcg
attttgccggagtacagctctctccccgagggaaagaatgctgcggaatatctgcgcgag
ctttgcctgaacggactgcaggaacgctacgggattacggaacggtggcaggatgaggca
cttcggagtgagctggagcagcgtctgaattatgagctcggcgtcatcgagaatatgggc
ttcagcgactattttctgatcgtatgggactttattgcttacgcccacagacagggcatc
gcagttgggcccggcaggggctcgtcggcgggaagcttggtcgcttacacccttcagatt
acaaatgttgatccgatgaaatataaattgttgtttgaacgcttcctgaacccggagcgg
attacgatgcccgatattgatatcgacttcagtgacgagcgccgggatgaggttatcgat
tatgtggtggataagtatgggaaggagcatgtcgcccagatcatcacgttcggtacgatg
gcggcaagggcggctgtacgcgatgtcggccgtgcgctgaatgtgccgttcggggatgtg
gacaaagcggccaagctgattcctaaccatcttggcatcagtattgccaaagcgatggag
caaagcccgcagctgaaggagcagtacgaaacaaggccgaaggtgcgcgagttgatcgac
atggcgatgaaagtggaaggtatgccgcgccatgcttcgacgcatgccgcgggtatcgtt
atttcacgcgatccgctgacggatgcggtgccgctgcaggaaggcagcgagaagacagcg
ctgacgcagtattccatggagaatttggagagcgtgggccttcttaagatggattttctg
ggtctgcggacgctgtccatcatcgagcggacgctgaaatggattcaagaattgaccggc
ggggcgcttgatttcgaacagataccggataacgatggcaacacgtacgaaatgctgggg
cgcggtgaaaccacgggcgtatttcagcttgagtccgcaggtgtaaggcgggtgctgaaa
gatctgaagccttcggcgtttgaggatatcgtatccgtggtcgccttgtatcgaccaggt
ccgatggaatttataccgaggtttatccaggttaagcacggccagatagatcctgagtac
cctcatgaggatctaattccaatacttggcgatacttatgggatcattgtctatcaagag
cagatcatgcagattgcctcgacgatggcgggcttctctctcggggaggcggatctgctt
cgccgagcggtatcgaagaaaaagcgcgaggtgctggaccgggagcgcagccacttcgtt
tcgggcagcctcaagcttggctatagcgaggatgaagctaaccgcgtgtacgatatgatt
gtgcggtttgcgaactatggatttccgcgtgcgcatgctgccgcctacggcgtgctcgct
ttccagacggcttatctgaaggcacattatccggttccattcatggcttccatgctgacc
gccgttatggggagtcaccggaaggttgcagaatacgtgctggaggctcgccgcatcgat
attgaagtgatgccgcccgatgtcaatgaaagcgggacatattttacgccggtcgtaagc
cagtctgaatccggcagcctggatgaagggagccatcatttcaccgaaggcggcattcgc
tttgggcttgcagccatcaagaacgtgggcacccaggcggttgagaatatcgtggagata
cgccgcgagaagccatttgaaagtctgctcgatttttgccgccgcgtagacctccgcgta
tgcaacaagcgcgtgatcgagtcactcatccaggccggggccttcgattccttgccgggt
caccgctcccaactggtggccatgctggatgagacggtggaggcagctgtgaagtggcgt
aaagagcgggacgacctgcaaattcagctgtttgactttgttgaagcaaccaattgggac
attgaatatcctgacatcccgccttatacggcaggtcagcagctcgaattcgagcgtgag
cttctgggtatgtatctgtccggccacccgctggatggatatgaagatacactgacggag
tcgggggccgaccggctaatggaccttcatgaagcggcagacgaatcgatggctgccgtg
gccggtatggtggttacgctgaagacgattacgaccaaacagggcaaagcgatggccttc
atggaatgcgaggaccaaatcgagcgctgcgaggttgtgctctttcctgaagtatggaaa
cgaagcgcgcatctgattgaaaaaggcgccctgctcgccatacgggccaaggtacagctg
caggatgaaggcttcaagctgctggccgaagaagtggcgccgcttgaagcgcagacgctg
cgtcaactggtccagcggagcaaggtccgtggagcagcaggcggcggcgaggggcaaagc
cgggggaccaggatcaggcagcggcggggctggaagatcgggtccgggtccgtcaggagc
acagccggtttccaccgcagtgccatcggcagagccggccgcgaccccggtgaacaccat
gaatggcggtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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