KEGG   Phaseolus vulgaris (common bean): PHAVU_001G008600g
Entry
PHAVU_001G008600g CDS       T03093                                 
Name
(RefSeq) hypothetical protein
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PHAVU_001G008600g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvu03041]
    PHAVU_001G008600g
Enzymes [BR:pvu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     PHAVU_001G008600g
Spliceosome [BR:pvu03041]
 Complex C
  Other components
   Step II factors
    PHAVU_001G008600g
SSDB
Motif
Pfam: OB_NTP_bind HA2_C S1 HA2_N Helicase_C DEAD AAA_22 AAA_19 nSTAND3 AAA_30 AAA_16 Sigma54_activ_2 ABC_tran T2SSE TsaE Flavi_DEAD PhoH
Other DBs
NCBI-GeneID: 18639996
NCBI-ProteinID: XP_007160687
UniProt: V7CUW8
Position
1:complement(737636..742343)
AA seq 1201 aa
MAVDNPEDGLKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGRSSENVEDFDAKLKE
NGAEMPDYFVRTLLTIIHAILPPKPKDLKKEKESSNGKTKFKALAIADDRDRAKELRKEM
ESEAKEKLSEQIEEDDGYRDRDRRDRRRDRYEEDDRRDHRRRGRDRDDEDDRRDYSRRGR
DRDDEDDRRDYSRRGRDKYDKDRDRDKDGDKYERRRRDDYEENGRGRENGDREGNRKGTR
QVSGEPELYAVYKGRVSRVMETGCFVQLEDIRGKEGLVHVSQMATRRITNAKDVIKRDQE
VYVKVISVSGQKLSLSMRDVDQHTGKDLLPLKKSSEDDTLRMNPQGLRDGPVSRTGLSGI
RIVEEDDVGSSRRPLKRMSSPEKWEAKQLIASGVMGVSEYPTYDEEGDGLLYQEEGAEEE
LEIELNEDEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKERREVREQQQRT
MLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLS
IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQ
PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDENLS
QYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFFNCNIFTI
PGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERM
KGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDP
GFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTI
PEIQRINLGMTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLG
RKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQ
PEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAG
KNFTKVRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMT
TKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRR
A
NT seq 3606 nt   +upstreamnt  +downstreamnt
atggcggtagataatcctgaggatggattgaagaagctggaatacttgtcgcttgtgtcg
aaggtgtgcaccgagttggagtcccacaccggcaccggcgacaaagttctagcggagttc
atcactgagttgggtcgatcgtcggagaatgttgaggattttgacgcgaagttgaaggag
aatggtgcggagatgccggattactttgtccgaacgctcctcactattattcacgcgatt
ctccctccgaagccgaaggatttgaagaaggagaaagagagtagcaacggcaagaccaag
ttcaaggctctggccatcgcagacgatagggaccgggccaaggagcttcggaaggagatg
gaatctgaggccaaggagaagctgagtgagcaaattgaggaagatgatgggtacagagac
agagatcgaagagataggcgcagagataggtatgaggaagatgatagaagggatcaccgc
agaagaggaagagacagagatgatgaagatgatagaagggattacagcagaagaggtaga
gatagagacgatgaagatgataggagggattacagcagaagaggaagagataagtatgat
aaagatagagatagagataaagatggtgataagtatgagaggcgcaggagagatgattat
gaagagaatgggcgcggaagggagaatggggatagagaggggaacagaaagggtacacgg
caagtttctggtgaacctgaattatatgccgtttacaaagggagggtgtccagggtaatg
gagactggatgctttgtccagttagaagacataagagggaaggaggggttggtccatgtg
tcacagatggccactcggaggatcacaaatgccaaagacgtcattaagcgcgaccaggag
gtttatgtaaaggtgatctcagtttcgggacagaagttgtctctttccatgagggacgtt
gatcagcacacaggtaaggatctccttccgttgaagaagagctccgaggatgataccttg
aggatgaatccgcagggtttaagggatgggccggtttccaggacagggctttcaggtatc
aggattgtagaagaagatgatgttggttcttcgcggagacctctgaagagaatgagctca
ccggagaaatgggaagcaaaacagttgattgcgtcaggtgtgatgggtgtttcagagtac
ccaacttatgatgaagagggagatggattgctgtaccaagaggaaggtgctgaggaggag
cttgagattgagttgaatgaggatgaacccgcattcttgcaagggcagagcagatactca
atggatatgtctcctgttaagatttttaagaatcctgaaggttctctgggtcgagctgct
gcactccagtctgcacttataaaggagcggagggaagtgcgagaacaacaacaacggaca
atgcttgattcaattccgaaggatctcaatcggccttgggaagaccctatgccagagtca
ggtgaaaggcatcttgcccaggagcttagaggtgttggcttatcagcctatgatatgcca
gaatggaagaaggatgcatatgggaaaacaattacctttgggcaaaggtcaaagctttct
attcaggagcagaggcagagtttgccaatttacaagttaaaaaaagaattgattcaggct
gtgcatgataatcaggtgttggtagttattggagaaactggttcaggtaagactactcag
gttacacagtatcttgccgaagctggttataccactagaggaaaaattggatgtactcaa
cctcgtagggtggctgcaatgtcagttgcgaagagggtagccgaagagtttggttgtaga
ttgggagaagaagtaggttatgccattcggtttgaggattgcactggaccagatactgtt
atcaagtacatgacagatggtatgcttcttagggagatattggtcgatgagaatctgtca
cagtattctgttataatgcttgacgaagcccatgaaagaactattcatactgatgttctt
tttggactgctcaagcagctagtgaagcgaagacctgaattgcgattgattgtcacctct
gctacactggacgctgagaaattttcaggatatttctttaactgtaacatctttacaatt
cccggtagaacttttcctgtagagatactttatactaaacagcccgaaagtgattattta
gatgcatctttaataactgtccttcagatccacttgacggagcccgagggagacgttctt
ctctttttgactgggcaagaggagattgattttgcttgccaatctctatatgagagaatg
aaaggattaggtaagaatgttccagagctgatcattttaccggtttatagtgcccttcct
agtgaaatgcagtctaggatatttgaccctgcccctcccgggaaaaggaaagtggttgtg
gctactaacattgctgaggcttctttgactattgatgggatattttatgttattgatcct
ggatttgctaagcaaaatgtttataacccaaagcaaggtcttgattctttggtgataact
ccaatttcacaagcatcagccaaacaaagagctggacgggcagggcgtactggacctggg
aagtgttatcgcctttataccgagagtgcatataggaatgagatgtctccaactacaatt
cctgagattcaaaggataaatctggggatgactacacttaatatgaaagctatggggata
aatgatctactgtcctttgattttatggatccaccatcacctcaagcactgatttctgcc
atggagcagctttatagtcttggagcattggatgaagagggccttttgaccaaattgggg
aggaaaatggcagaatttcctttggatccacctttgtccaagatgttgcttgccagtgtg
gaccttggatgcagtgatgaaattttgaccataattgccatgatccagaccggtaatata
ttttacaggccaagggaaaagcaagctcaagcagatcagaagagggcaaagtttttccag
ccagagggtgatcatcttacactacttgctgtttatgaggcttggaaagccaagaatttt
tctgggccttggtgttttgagaatttcgtgcaatccagatcattgagaagagcacaggat
gtcaggaaacaacttctcaccattatggataagtacaaattggatgttgtaagtgctgga
aaaaacttcaccaaagtaaggaaggctatcactgctggattcttttttcatgctgccaga
aaggatccccaagaagggtacagaaccctagttgagaaccaacctgtgtatatccatcca
agttctgctttgttccagaggcagccagactgggtcatataccatgagcttgtgatgaca
actaaggagtatatgcgtgaggtcactgtcatagaccccaaatggcttgttgaattggct
ccaagatttttcaaagtggcagatcctacaaagatgagcaagcggaagcgtcaagagcga
attgaaccactctatgatagataccacgagccaaattcatggcgtttgagtaagcgccgt
gcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (17)   
   Pfam (17)   
All databases (30)   

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