KEGG   Phaseolus vulgaris (common bean): PHAVU_006G168300g
Entry
PHAVU_006G168300g CDS       T03093                                 
Name
(RefSeq) hypothetical protein
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu00260  Glycine, serine and threonine metabolism
pvu00460  Cyanoamino acid metabolism
pvu00630  Glyoxylate and dicarboxylate metabolism
pvu00670  One carbon pool by folate
pvu01100  Metabolic pathways
pvu01110  Biosynthesis of secondary metabolites
pvu01200  Carbon metabolism
pvu01230  Biosynthesis of amino acids
pvu01240  Biosynthesis of cofactors
Module
pvu_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    PHAVU_006G168300g
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PHAVU_006G168300g
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    PHAVU_006G168300g
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    PHAVU_006G168300g
Enzymes [BR:pvu01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     PHAVU_006G168300g
SSDB
Motif
Pfam: SHMT Beta_elim_lyase
Other DBs
NCBI-GeneID: 18629047
NCBI-ProteinID: XP_007147954
UniProt: V7BSE7
Position
6:27963133..27967565
AA seq 526 aa
MQACAMMGSLQQSVWTKGMNFPAKGYGSNNGFVPEVKFCNMKPCKASPVEGSLVTGKPSS
LSFSVPEIGGDGSSFLDYGLTEADPEVRVIIDKEKDRQFKSLELIASENFTSRAVMEAVG
SCLTNKYSEGLPGKRYYGGNEYIDELETLCQQRALAAFHVDGNKWGVNVQPLSGSPANFA
VYTAVLKPHDRIMGLDLPHGGHLSHGFMTPKKRVSATSIYFESMPYRLDESTGLIDYDML
EKTAKLFRPKLIIAGASAYPRDIDYPRMRKIADEVGAFLMMDMAHISGLVAASVLANPFD
YCDIVTTTTHKSLRGPRGGMIFFKKDPVHGVDLEPAINNSVFPGLQGGPHNHTIGGLAVC
LKYAQTPEFKNYQNQVVANCRALAQRLNEHGYKLVSGGSDNHLVLVDLRPSGLDGARVEK
ILDMASITLNKNSVPGDKSALVPGGIRIGAPAMTTRGLSEKEFALIADLIHEGVQISHEA
KSLVSGTKLQDFLKFVSSSEFPLGEKVSELRRKVEALTTQYPIPGV
NT seq 1581 nt   +upstreamnt  +downstreamnt
atgcaagcgtgtgcaatgatgggttctctgcaacaatccgtttggactaaggggatgaat
ttccctgctaaggggtatggcagtaacaacgggtttgtacctgaagtgaagttctgcaac
atgaagccgtgcaaagcctctcctgtcgaaggaagtttagtcactggaaagccgtcatct
ctgtctttctctgttcctgaaattggaggtgatggaagtagcttcctggactatggtttg
actgaagccgatcctgaggttcgtgtaattattgacaaggagaaggaccgacaatttaaa
agtcttgagcttattgcttctgagaattttacatctagagctgtgatggaagcagttggt
tcatgcctcacaaacaagtattcagaaggattgccgggtaaaaggtactatggtgggaat
gagtacattgatgagcttgaaaccctatgccaacaaagggcactggctgcatttcatgtg
gatggaaataaatggggtgtcaatgttcaaccattatctggttccccagctaattttgca
gtatacactgcagttcttaaaccacacgatcggattatgggtttggacttgcctcatggt
ggacatttgtctcatggattcatgacgcctaaaaaacgtgtatctgctacatcaatttat
tttgaatctatgccttatcgacttgatgaatcaacaggtcttattgattatgatatgctg
gagaaaactgctaaactcttccggccaaaactcattattgctggggctagtgcttatcct
cgggacattgactaccctcgcatgagaaaaattgcagatgaagtaggtgcttttcttatg
atggatatggctcatataagtgggcttgttgctgcatctgtacttgctaatccctttgac
tattgtgatattgtgaccaccacaacccacaagtctttaagaggtccaagaggtggtatg
atattcttcaagaaagatcctgtgcatggggttgatctggagcccgccatcaacaattct
gtttttcctggtctacaggggggtcctcataaccacacaattggaggactagcagtttgc
ttgaagtatgcccagactccagagtttaaaaattaccagaatcaggtggttgccaactgt
agggctcttgctcagcggttaaatgagcacggatataaattggtttctggtggtagtgac
aatcacttggttcttgttgatctaaggccttctggtcttgatggtgctcgggtggagaaa
attcttgacatggcttccataaccctcaacaaaaattcagtgcctggtgataagagtgcc
cttgttccgggaggcattcgcattggggcacctgcaatgacaacaaggggacttagtgag
aaagaattcgcactaattgcagacttaattcatgagggtgtgcaaataagtcatgaagcc
aaaagtttggtctcaggaacgaagctccaggattttttgaagtttgtatcatcttcagaa
tttcctttgggagagaaggtttcagaattgcgcaggaaagttgaagctcttactactcag
tatccaataccgggagtctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (14)   
   KEGG PATHWAY (9)   
   KEGG MODULE (5)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (38)   

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