KEGG   Phaseolus vulgaris (common bean): PHAVU_008G2657000
Entry
PHAVU_008G2657000 CDS       T03093                                 
Name
(RefSeq) hypothetical protein
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03030  DNA replication
pvu03410  Base excision repair
pvu03420  Nucleotide excision repair
pvu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PHAVU_008G2657000
   03410 Base excision repair
    PHAVU_008G2657000
   03420 Nucleotide excision repair
    PHAVU_008G2657000
   03440 Homologous recombination
    PHAVU_008G2657000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvu03032]
    PHAVU_008G2657000
   03400 DNA repair and recombination proteins [BR:pvu03400]
    PHAVU_008G2657000
Enzymes [BR:pvu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PHAVU_008G2657000
DNA replication proteins [BR:pvu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     PHAVU_008G2657000
DNA repair and recombination proteins [BR:pvu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     PHAVU_008G2657000
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PHAVU_008G2657000
SSDB
Motif
Pfam: DNA_pol_A DNA_pol_A_exo1
Other DBs
NCBI-GeneID: 18624128
NCBI-ProteinID: XP_007142260
UniProt: V7B8X0
Position
8:complement(57696621..57703582)
AA seq 1013 aa
MIRNLFERGGSIRREVTAASMEVSALRPHCPLCRRCFSRPFSLSSLLPSLSLQRRKIQSF
QISYNGLRNSSVLGNSVQSRTDFSCCPKGTSVGLNKCNGVRYERDFPCKSPVCISSVKIA
TASTGTLEEVTKEEEVDSLRSCETPVRMMDVASCNNGFSATTAGRHLSGGDCRGWTIAKD
KLTENKKEMNGSNKFDKENGSCNASYGVASFGENRAVFKNGNKNIILQDHREHVSSSVKC
SVLNNSKVFVESERVVRQCNESPLGTGKEKITVVNGDHGLDRTVKDSINVTVAKKTVGTD
KTKLLNRLCSIYEDILVVDNVPLAEEVSKMLTTKYRHLIYACDTEVAKIDVKQETPVDHG
EIICFSIYCGPEADFGAGKSCIWVDVLDGGGKEILEKFAEFFSDSSIRKVWHNYSFDCHV
IENYGFKVSGFHADTMHMARLWDSSRLLGGGYSLEGLTGDRRVMSRTQLDHQKDLIGKVS
MKTIFSKKKLKKDGSEGKTSVIAPVEELQRDERIPWICYSALDASSTLKLYESLKGHLSG
MPWKFDGVPVYGKTMYDFYNEYWRPFGELLVMMESEGMLVDRAYLESIEKVAKVEEEVAT
NRFRKWASRYCPDAQYMNVGSDSQLRQLLFGGTLNRKDSSLALPTERLFKIPNVDNVVEE
GKKAPKKFRDIKVTSLGYDLKTEMYTATGWPSVSGDALKAMAGKISADYDFFYEDCNLDH
GDEDGIPSQSQVVPLKIDSSAYGTACAAFPTEEEGREACHAIAALCQVCSINSLISNFIL
PLQGQNISGKDLRVHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIASPGNSLI
VADYGQLELRILAHLADCKSMLEAFKAGGDFHSRTAMNMYPYIREAVEKKEVILEWHPKP
GEDKPPVPLLKDAFASERRKAKMLNFSIAYGKTPVGLSKDWKVSVKDAKKTVDLWYNDRK
EVLQWQEERKKEAHEFHCVHTLLGRARRFPLMAQANKYQKGHIERAAINTPVQ
NT seq 3039 nt   +upstreamnt  +downstreamnt
atgattcgtaatctgtttgagcgtggagggagcattcgtagagaggtgactgctgcctca
atggaggtgtctgctttgaggccacactgtcccttatgccgccgctgcttctcacgccct
ttctctctctcttccctcttaccttctctgtcactccaacgaagaaaaattcagtcattc
caaatttcatacaatggcctccgaaatagctctgtgcttggaaattctgtacaatctaga
acagatttctcttgctgtccaaaagggacatctgtgggattaaataaatgcaatggcgtg
aggtatgagcgtgattttccgtgcaaaagtccagtttgcatttcatctgtgaaaattgca
actgcatcaactggcacactggaggaggtgacaaaggaagaagaggtggattcgttgcgt
tcatgtgaaacgccagttaggatgatggatgtggcttcttgcaataatggattttccgca
accactgcaggtagacatttgtctggtggtgattgtagaggctggactatagcaaaagat
aagttaacagaaaacaaaaaggaaatgaatggctcaaataaatttgacaaggaaaatggt
agttgtaatgcatcttatggagttgcttcctttggtgagaaccgggctgtttttaagaat
gggaacaagaatataatactgcaggatcatcgggagcatgtctcatcatctgttaagtgt
tctgtattaaacaattcgaaggtgtttgtagagtctgaaagggtggtccgccagtgtaac
gaatctcctctgggaactggtaaagagaaaatcactgtagtcaatggtgatcatggtttg
gatagaactgtaaaagattcaattaatgtaacagttgcaaaaaagacagttggtactgac
aaaacaaagcttctaaataggctttgtagtatctatgaagatattctggttgtggataat
gttcctctagcagaggaagtttccaagatgctcacaacaaagtataggcatctcatatat
gcatgtgataccgaggtggccaagatagatgtcaaacaagaaactcccgtagatcatggt
gagataatatgcttcagcatttattgtggtccagaagctgattttggagctggaaagtcc
tgtatctgggtagatgttcttgatggtggaggcaaagaaattttagaaaaatttgctgaa
ttttttagtgactcttctattaggaaggtctggcataattatagctttgactgtcatgtt
atagagaattatgggttcaaagtttctggatttcatgctgatacaatgcacatggcacga
ctatgggattcttcaagacttttgggtggaggttattctcttgaagggcttacaggtgac
agaagggttatgtctaggactcagctggaccatcaaaaggatttgattggtaaggtgtca
atgaaaactatatttagtaagaaaaaattgaagaaagatggatctgagggtaaaacaagt
gtcattgctcctgttgaagagctacagagagatgagcgtataccttggatatgctattct
gccttggatgctagcagcactttgaagctgtatgagagcctaaagggccatctttctggc
atgccctggaaatttgatggtgtgccagtgtatggcaaaaccatgtatgatttctacaat
gaatattggcggccatttggtgagcttctagtcatgatggaatctgagggaatgctagtt
gatcgggcttatcttgaaagcatagaaaaggtggccaaagtagaggaagaggtagctact
aatagattccggaaatgggcaagtagatattgtccggatgcccaatatatgaatgtggga
agtgattcacagttgcgccagctactttttggtggcactttgaacagaaaggactccagt
ttggcacttccaactgaacgattattcaaaattcccaatgttgataatgtggttgaagaa
ggcaagaaggctcccaaaaaatttcgtgatataaaggtgacaagcctaggctatgacttg
aagactgagatgtacacagcaactggttggccatcggttagtggtgatgcattaaaggcc
atggctggaaaaatttctgcagattatgactttttttatgaggattgtaacttggatcat
ggtgatgaagatggaattccttctcaaagtcaagttgtacccctaaaaattgattcatct
gcatatggaactgcctgtgctgcctttccaactgaggaagaagggagagaagcttgccat
gcaattgctgctttatgtcaagtttgttctatcaactctttgatttctaacttcatcctt
cccctgcagggacaaaatatatctggtaaagatcttcgtgttcactgctccttaaatatc
aacacggagacaggacgcttatcagcaagaaggccaaatctgcagaatcaacctgctctg
gaaaaagaccgatacaaaatccgtcaagcattcattgcttcacctgggaattcccttata
gttgctgattatgggcagctggaacttaggattctggcacatcttgcagactgtaagagc
atgttggaggcttttaaagctggtggagattttcattcaaggactgcaatgaatatgtac
ccatatattcgtgaagcagttgagaaaaaggaagtgattcttgagtggcatcctaagcct
ggtgaagataaacccccagttcctcttttgaaggatgcctttgcttctgaaagaagaaaa
gctaaaatgcttaacttctcaattgcatatggaaagacacctgttgggctttccaaggat
tggaaggtttctgtgaaagatgctaagaaaacagttgacctttggtacaatgatagaaaa
gaggttttacaatggcaagaggagcgtaaaaaggaagctcacgagtttcattgtgttcac
acattgctagggcgagcacggcggttccctttgatggcccaagctaacaaatatcagaag
ggtcacattgagcgagctgctattaatactcctgtccag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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