KEGG   Phaseolus vulgaris (common bean): PHAVU_011G070100g
Entry
PHAVU_011G070100g CDS       T03093                                 
Name
(RefSeq) hypothetical protein
  KO
K03018  DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PHAVU_011G070100g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvu03021]
    PHAVU_011G070100g
Enzymes [BR:pvu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PHAVU_011G070100g
Transcription machinery [BR:pvu03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     PHAVU_011G070100g
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_1 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 18615409
NCBI-ProteinID: XP_007132141
UniProt: V7AFW1
Position
11:6125823..6147990
AA seq 1392 aa
MNRGRTEGITFTKEPFMEDAGPRKIKNMKFSMLSDSEISKLGEVQVWKGSYYDSFKKPIH
GGLLDPRMGPANKSLGCATCHGNFHDCPGHYGYLNLALPVFNVGYLGSIVEILKCICKGC
ARILLDEDTRKKHLKKMRSSKKSELDKMDFVKVRIIKDCSKVVNCPRCGYINGSVKKLPA
SLIIMHDCSKCKNNIVEELESTLSRIKDSKATANVSNRILNPFQVLSLFRKMLDEDCELL
YVAERPEKLIITNIVVPPIAIRPSVVMDESLSNENDITERLKNIIQANAVLRQELQESSV
SSKFLDGWEILQNEVAQFINSEVRGIPFYMQSTKQLAGFVQRLKGKHGRFRGNLSGKRVE
YTGRTVISPDPNLKISEVAIPILMASILTYPERVTHHNIEKLRQCVRNGPDKYPGARMLR
RDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPW
RTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQ
DFLTSSFLVTRKDTFYDRSAFTNICTFIGDGLDLIDLPTPAIVKPVELWSGKQLFSLLLR
PHANFKVYVNLTVKEKTYTKLDDKKRELKTLCPNDGFVYFRNTELISGQIGKVTLGNGNK
DGLFSVLLRDYKAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPKEILIKKKDETLSEG
YKKCDNHIQAFNKGKLELLAGCDAPQTLETQITGVLNGLRDMAGKVCMQTLHWRNSPLIM
SQCGSKGSPINISQMVACVGQQSVGGRRAPNGFLDRSLPHFPLNAKTPAAKGFVANSFYS
GLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSMEDLFLHYDYTVRNAGGSIVQF
CYGDDGMDPGGMEGKNGKPLNFERLFLKSKAICPNKDDDEVLSSSDVCKVVQEKLSEFGV
SREVEKGVLEVGFSADFVQSLQSFIKDNTKLTEETFTDDNSQILKKFGERISGITRAQLE
VFLNICLSRYHSKKIEAGAPVGATGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRVKE
IMNGNKKISTPIITAILERTDCANTARIVKGRIEKTNLGQVAKSIKVVVTSRLASVVITL
DMERIQDAHLNIDANIVKESILQTKKAKLKPEHIKILDVKKLRVVPQDGDRSKLHFQLNY
LKNLLPSVVVKGIKTADRVVISKEEDKITKAEKFKLLVEGTGFREVMGVEGVDGCKTVSN
HIHEVRDTLGIEAARECIVKEIKYVMVDTHGMNIDTRHMMLLADVMTATGHILGINRFGI
SKMGKSVLMLASFERTADILFQASVRGRDDSIGGVSESIIMGIPITIGTGMIKVKQRLEL
PDLPHGASPILS
NT seq 4179 nt   +upstreamnt  +downstreamnt
atgaatagggggagaacggaaggcataacctttacgaaggaacctttcatggaggatgca
gggcctcgtaagataaagaacatgaagttctccatgttatcagattcggaaataagcaaa
cttggtgaagttcaagtgtggaaaggttcctactatgattcttttaagaaacctatccat
ggtggcttgttggatcctcgcatgggtcctgctaacaagagtcttggctgtgctacatgc
catgggaattttcatgactgtccagggcactatggatacttaaaccttgcccttcctgta
ttcaatgttggatatttaggtagcattgtggaaatactgaagtgcatttgtaagggctgt
gctcgaattctccttgatgaagatacccgtaaaaaacatttgaagaaaatgagaagttcc
aaaaagagtgagctggataagatggattttgtgaaagttcgtataattaaagattgtagc
aaagttgtgaattgccctagatgcggatatatcaacggttcagtaaagaagcttccggct
tcactgattatcatgcatgattgttcaaaatgtaaaaataatattgttgaagagcttgaa
tccacactttctcgtataaaagactctaaggcgactgccaatgtgtctaatcgaattctt
aatcctttccaagttctttcgttgtttagaaagatgcttgacgaggactgtgaattactc
tatgtagctgaaagaccagagaaactcataataacaaacattgttgtgccacctatagct
attcgaccttcagttgtaatggatgaatcactgagcaatgaaaatgacataactgagagg
ctaaagaacataatccaagcaaatgctgttctgcgccaggaattacaagaatcaagtgtt
tcatccaaatttctggatggttgggaaattcttcaaaatgaagttgctcaattcataaat
agtgaggttcgtggtataccattctatatgcaatcgaccaagcaattggctggttttgtt
cagcgcttgaaaggtaagcatggacgtttccgtggcaacttatctggaaaacgtgttgaa
tatacaggaagaacagttatttctccggatcctaatctgaagatttctgaggttgcaata
cctatccttatggctagcatactgacttatcctgagcgtgttacgcatcacaacatagag
aagttgagacagtgtgtgagaaatggtcctgataagtatcctggggcgagaatgcttaga
cgtgatggaggccactcatggtccttaaaagttctttgtaggaaacgtgctgcagatgaa
ttgaggattggtgatattgttgatcgccatttagaagatggagacattgttcttttcaat
agacaaccaagcttacatcggatgtctataatgagccacagggcaaggattatgccttgg
agaactttaagattcaatgaatctgtatgtaacccatataatgctgactttgatggtgat
gagatgaacttacatgtcccacaaactgaggaggctcggacagaggctattttgttgatg
ggggtgcaaaacaatttatgcacaccaaaaaatggcgagattctggttgcttctacgcaa
gactttttaacctcttcttttctcgtaaccagaaaagatactttttatgaccggtctgct
tttacaaatatttgcactttcataggtgatggcttggatcttattgatttgccaactcct
gcaattgttaagcctgttgagctttggagtggtaagcagttatttagccttctactgcgc
ccacatgcaaattttaaagtctatgtgaatcttactgttaaggagaaaacatacacaaag
cttgatgacaagaaaagagaattgaaaacattgtgcccaaatgacgggtttgtttatttt
cgtaatactgagttgatctccggccaaattggaaaggttactttaggaaatggcaataag
gatggactgttctctgtgctactacgagactataaagcacatgcagctgcgtcttgcatg
aatcgtttagctaaattgagtgcgcggtggattggtaatcatgggttctccataggcatt
gatgatgtccaaccaaaagagatactgattaagaagaaagatgaaacactttcagaaggt
tataagaaatgtgataatcacatacaagctttcaataaaggaaaactagaactcttagct
ggttgtgatgctcctcaaacattagagactcagattactggggtattaaatggactccgt
gatatggcagggaaggtttgcatgcagaccctgcactggagaaatagtccattgatcatg
tcgcagtgtggatccaaaggatctcctattaatatcagtcaaatggttgcttgtgttggt
caacagtctgttggtggtcgtcgtgcacctaatgggttcctagatcggagccttcctcat
ttccctctaaatgcaaagacccctgctgctaaaggttttgttgctaattcattttacagt
ggattgtcagccactgagtttttcttccatacaatgggagggcgagaagggcttgttgat
acagcggttaaaactgcagacacaggatatatgtctcgtcaattaatgaaatccatggag
gatttgtttttacattatgattacactgtgagaaacgcagggggttctattgttcaattt
tgctatggagatgatggcatggatccaggaggcatggaaggaaaaaatggaaaaccatta
aattttgagcggttgtttcttaaaagcaaggccatatgtcccaataaggacgatgatgaa
gttttatcttcctcagatgtgtgcaaagtagttcaagagaagctgtcagaatttggtgtg
tctagggaagttgaaaaaggggttttagaggtgggattctctgcagattttgtacagtct
ctacagtcctttattaaagataatacaaaattaacagaagaaactttcactgatgacaat
tcccaaatcctgaaaaaatttggggagaggatatctgggatcactcgtgcacaactagag
gtttttttgaatatttgtctatctcgttatcattcaaaaaaaattgaggctggagctcct
gttggtgcaactggagctcatagtattggggagcctgggacccagatgactttgaaaact
ttccactttgctggagttgcaagcatgaacgtcactcttggagttccacgtgtcaaagaa
attatgaatggaaacaaaaagatcagtacaccaattatcactgcaatacttgagagaact
gactgtgcaaatactgcaagaatagttaaaggtcgaatagaaaaaacaaatttaggccag
gttgcaaagagtataaaagttgttgtgacttcaagattagcgtcagttgttatcaccctt
gacatggaaagaatccaggatgcacatctaaatatagatgctaatattgttaaagaatca
attttacaaactaaaaaggcgaaactgaagccagagcacatcaagattttagatgtgaaa
aagcttcgagttgttccccaagatggtgatagaagtaaattgcattttcaacttaattat
ctgaaaaatttgcttccgtcagttgtagtaaagggaattaaaactgctgatcgagttgtt
atcagtaaagaagaagataaaatcaccaaggctgaaaagttcaaattactggttgaaggc
acgggctttcgagaggttatgggagttgaaggggttgatggatgcaaaactgttagtaat
catattcatgaagttcgggacacgctgggaattgaagctgccagagagtgtatcgttaag
gagataaagtatgtaatggtggatacgcatgggatgaatatagacacgcgccatatgatg
cttctagcagatgtgatgactgccactggtcatatcctcggaataaatagatttggaatt
tcaaagatgggcaaaagtgtattaatgcttgcatcatttgagaggacggcagatattctt
ttccaggcatctgtacgtggaagggatgactcgattggtggagtaagtgaatccataatc
atgggtataccaattacaataggcactggaatgatcaaggtcaaacaaaggttggagctt
ccggatctgcctcatggagccagtcctattctgtcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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