KEGG T01106: Pecwa

Pectobacterium parmentieri WPP163: Pecwa_3375

Entry

Pecwa_3375        CDS       T01106

Name

(GenBank) putative RNA 2'-O-ribose methyltransferase

K06968

23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]

Organism

pwa Pectobacterium parmentieri WPP163

Brite

KEGG Orthology (KO) [BR:pwa00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pwa03009]
    Pecwa_3375
Enzymes [BR:pwa01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.186  23S rRNA (cytidine2498-2'-O)-methyltransferase
     Pecwa_3375
Ribosome biogenesis [BR:pwa03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Pecwa_3375

SSDB

Motif

Pfam:

RLMM_N RlmM_FDX FtsJ Spt5-NGN

Other DBs

NCBI-ProteinID:

ACX89113

Position

complement(3701565..3702665)

AA seq 366 aa
MNKVILYCRPGFEKECAAEITEKATQHNAFGFARVKENSGYVVFECYQHEDADRLVKTLP
FHELIFVRQMFVSGDLLRDLPPEDRITPIVGMLTGAIERAGELRVEVPDTNESKELMKFC
RKFTVPLRAALREHNILLGYEKADRPVLHVLFIAPGCCYVGYSYSNNHSPFYMGIPRLKF
PSDAPSRSTLKLEEAFHVFIPADEWDERLGSGMYAVDLGACPGGWTYQLVKRSMMVYAVD
NGPMAPSLMDTGQVMHHQADGFRFEPPRNNVYWLVCDMVEKPAKVTSLMSDWLIKGWCRE
AIFNLKLPMKKRYEEVSQNLALLRERLSENGIHAEVHAKHLYHDREEVTVHVRRFWSAVP
GRRDER

NT seq 1101 nt +upstreamnt +downstreamnt
atgaataaagtcattttgtattgccgtcctgggtttgagaaagagtgtgcggcagagatc
accgaaaaagccacgcagcacaatgcgttcggatttgcgcgggtaaaagaaaacagcggt
tacgtcgtatttgaatgctatcagcatgaagatgccgaccgtctggtgaaaacgctgccg
ttccatgagctgatttttgtccgtcagatgttcgtcagcggtgacttgctgcgagacctg
ccgccggaagaccgtattacgccgatcgtggggatgttgaccggtgcaattgaacgcgca
ggggagctgcgtgttgaagtccctgacaccaatgaaagcaaagagctgatgaagttctgc
cgcaaattcaccgtgccgttgcgtgccgcgttgcgcgaacacaacattttgctgggctat
gaaaaagcagatcgacccgtgctgcatgtgctgtttattgcaccaggctgctgttatgtc
ggttactcttatagcaacaaccattcaccgttttatatgggcattccacgtcttaagttc
ccttctgatgcaccaagccgttcgacgctgaagctggaagaagcttttcatgtctttatt
cctgcggatgagtgggatgagcgtctgggcagcggcatgtatgcggtggatttgggggcg
tgccccggcggttggacttatcagttggtcaaacgcagcatgatggtttatgcggtagac
aacggaccaatggcaccgagcctgatggataccgggcaggtgatgcaccatcaggcggat
gggttccgttttgaaccaccgcgcaataatgtgtattggctggtgtgcgacatggtggaa
aaacccgctaaagtcacgagcctgatgagtgattggttaattaaaggctggtgtcgtgaa
gcgatattcaacctgaaattgccaatgaagaagcgctatgaggaagtgtcgcagaatctg
gcgttgctgcgtgaacgcctcagtgaaaatggtattcatgccgaagtgcatgccaagcat
ttgtaccatgaccgtgaagaagtcacggtgcatgtacgtcgtttctggagcgcggtgccc
ggccgtcgcgacgagcgatag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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