KEGG   Pyrus x bretschneideri (Chinese white pear): 103940953
Entry
103940953         CDS       T03446                                 
Name
(RefSeq) RNA polymerase II transcription factor B subunit 5
  KO
K10845  TFIIH basal transcription factor complex TTD-A subunit
Organism
pxb  Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03022  Basal transcription factors
pxb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pxb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103940953
  09124 Replication and repair
   03420 Nucleotide excision repair
    103940953
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pxb03021]
    103940953
   03400 DNA repair and recombination proteins [BR:pxb03400]
    103940953
Transcription machinery [BR:pxb03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     103940953
DNA repair and recombination proteins [BR:pxb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     103940953
SSDB
Motif
Pfam: Tfb5
Other DBs
NCBI-GeneID: 103940953
NCBI-ProteinID: XP_009349405
Position
Unknown
AA seq 70 aa
MVNAVKGLFISCDIPMAQFIINYDNSLPASQRFIIHVLDSTHLFVQPHAAEMIRSAIAEF
RDQNSYEKPT
NT seq 213 nt   +upstreamnt  +downstreamnt
atggtgaacgctgttaaaggactgttcatctcttgtgacataccgatggcccaattcatc
atcaattacgacaattcactgcctgcttcacagagattcataatacacgtcttggatagc
actcacctttttgtgcagccccatgctgccgagatgataagaagcgccattgcagaattc
agggatcagaattcatatgagaagcctacttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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