KEGG   Pyrus x bretschneideri (Chinese white pear): 103950542
Entry
103950542         CDS       T03446                                 
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
pxb  Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pxb00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    103950542
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pxb03021]
    103950542
   03019 Messenger RNA biogenesis [BR:pxb03019]
    103950542
Enzymes [BR:pxb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     103950542
Transcription machinery [BR:pxb03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     103950542
Messenger RNA biogenesis [BR:pxb03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     103950542
SSDB
Motif
Pfam: Ssu72 Mitofissin
Other DBs
NCBI-GeneID: 103950542
NCBI-ProteinID: XP_009360042
Position
Unknown
AA seq 193 aa
MKFRYAMVCSSNQNRSMEAHSLLKRQGFDVASYGTGAHVKLPGPSLREPNVYDFGTPYKQ
MFDDLRRKDPELYKRNGILPMLKRNLGVKLAPQRWQDNAADGSFDVVLTFEEKVFDMVIE
DLNNRDHALRKCVLIINLEVKDNHEEAAVGARLALDLCQEIEAADSWEESIDDIVSGFEK
QQRRKLMYSISFY
NT seq 582 nt   +upstreamnt  +downstreamnt
atgaagttccggtacgccatggtgtgttcgtcgaaccagaaccggagcatggaggctcac
tcgctcctcaagcggcagggcttcgacgtcgcgtcgtacggcaccggagcccacgtcaag
ctccctggtccctccctcagagaacccaatgtttacgactttggcacgccttacaagcag
atgttcgacgatctccggcgaaaagaccccgaactgtacaagcgtaatggcatcttgcct
atgcttaaaagaaacttgggagtcaaactggcacctcagcgatggcaggacaatgctgcc
gacggttcctttgatgtggtgttaacattcgaagaaaaggtttttgacatggttattgaa
gatctcaacaaccgggaccatgctcttaggaaatgtgtgctgataatcaacttggaggtg
aaagataaccacgaggaggcggctgtaggagctcgtcttgctttagatctttgccaagag
attgaagcagccgattcgtgggaggaatcaattgatgatattgtatctggttttgagaaa
cagcagcgacggaagttaatgtatagcatctcattttattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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