KEGG   Rhodoferax antarcticus: RA876_05985
Entry
RA876_05985       CDS       T04655                                 
Name
(GenBank) geranylgeranyl pyrophosphate synthase
  KO
K13789  geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
rac  Rhodoferax antarcticus
Pathway
rac00900  Terpenoid backbone biosynthesis
rac01100  Metabolic pathways
rac01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:rac00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    RA876_05985
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:rac01006]
    RA876_05985
Enzymes [BR:rac01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     RA876_05985
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     RA876_05985
    2.5.1.29  geranylgeranyl diphosphate synthase
     RA876_05985
Prenyltransferases [BR:rac01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   RA876_05985
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-ProteinID: APW45997
Position
1229157..1230062
AA seq 301 aa
MDLLKRAEKALEFHFERAAGLGAPPRLVEAMRHAVFSGGARVRPQLVLSVAMACGEDAPE
LTDAAACAVELMHCASLVHDDMPAFDNADIRRGRPSVHKAFGEPLALLAGDALIVMAYQV
LLNAGKSDPERLVALMHALSAGVGLPSGIVAGQAWECEVKADLGQYQRAKTGALFVAATC
SGALCCASDAGPWATLGASLGEAYQVADDIRDVMGQAILLGKPSGQDVLHARPSAASELG
LDGAMAHFQSLIELAIASIPECSYRELLQQLVRREAERLVPSAAFAEFKRQSMLAPQSMS
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atggatttgttaaagcgcgcagaaaaagcccttgagttccattttgaaagagctgctgga
ttgggcgcaccgccaagactggttgaggctatgcggcacgcagtgttttctggtggcgcc
agagttcgtccgcaactggttttgtcggtggccatggcctgtggtgaggatgctcccgaa
ttgaccgacgctgcggcctgcgctgtggagttgatgcattgtgcatccttggttcatgat
gacatgcccgcttttgacaatgcggatatccgtcgtgggcggccttcggtgcacaaagcg
tttggagaacctctggctttgttggccggtgatgcgttgattgtgatggcttaccaagtg
ttgttgaacgcgggcaagtctgatcctgagcgcttggtggccttgatgcacgccttgagc
gctggtgtgggattgccatctggtatcgtggcgggacaagcttgggaatgtgaagtaaag
gccgaccttggccagtatcagcgcgccaaaacaggtgcactttttgttgctgctacctgt
tctggcgcattgtgttgcgccagcgacgctggtccttgggcaacgctgggtgcgagcctc
ggtgaggcctatcaggtggcagacgatattcgcgatgtcatgggacaagccattctgctg
ggcaagccctctggtcaagatgtcttgcatgcgcgcccgagtgccgctagtgaactgggt
ctggatggtgctatggcgcactttcagtccctgattgagctggcaattgctagcatcccg
gaatgttcgtatcgggagttgttgcagcagttggttcgccgtgaagccgagcggctggtt
cccagcgctgccttcgctgagttcaagcgccagagtatgcttgcaccccaaagcatgtct
gcttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

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