KEGG   Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_1414
Entry
Rahaq2_1414       CDS       T01770                                 
Name
(GenBank) apurinic endonuclease APN1
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
raq  Rahnella aquatilis CIP 78.65 = ATCC 33071
Pathway
raq03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:raq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Rahaq2_1414
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:raq03400]
    Rahaq2_1414
Enzymes [BR:raq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     Rahaq2_1414
DNA repair and recombination proteins [BR:raq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     Rahaq2_1414
SSDB
Motif
Pfam: AP_endonuc_2 DUF6871
Other DBs
NCBI-ProteinID: AEX51293
UniProt: H2IPX6
Position
complement(1489883..1490749)
AA seq 288 aa
MKFVGAHVSAAGGVDQAVLRAHELEATAFALFTKNQRQWKAAPLPEDVIEKFKVACEKYG
YQSHQILPHDSYLINLGHPVTEALEKSREAFLDELQRCEQLGLSLLNFHPGSHLMQIEED
KCLALISESLNIALDKTKGVTAVIENTAGQGSNLGFRFEHLAKIIEGVEDKSRVGVCIDT
CHAFAAGYDLRTVEECEKTFKHFDEVVGFKYLRGMHLNDAKSAFNSRVDRHHSLGEGNIG
NTVFSWIMKDARFDGIPMILETVNPDIWIDEIAWLKAQQKSENDEAAA
NT seq 867 nt   +upstreamnt  +downstreamnt
atgaagtttgtgggagcacacgtgagtgcggccgggggtgtcgatcaggcggttctgagg
gcacacgagctggaagccacggcttttgcgcttttcaccaagaatcagcgccagtggaaa
gccgcaccgttgccggaagacgtcatcgaaaaattcaaagtggcttgtgaaaaatacggc
taccaaagtcatcagattttgccgcacgacagctacctgattaacctcggtcatccggtc
accgaagcgctggagaaatcccgcgaggcgttccttgatgagttgcagcgttgcgaacaa
ctgggcctgtcgctgctgaatttccatccaggcagccacctgatgcaaatcgaagaagat
aaatgtctggcgctgatttctgaatctctgaacattgcgctggataaaaccaaaggcgtg
acggcagttatcgaaaacaccgccggtcagggcagtaatctcggcttccgcttcgagcac
ctggccaaaattattgaaggcgtggaagacaaaagccgcgtcggcgtctgcattgatacc
tgccatgccttcgctgcgggttacgacctgcgcacagtggaagaatgcgagaaaaccttt
aagcactttgacgaggtggtcggttttaaatacctgcgcggtatgcacctcaacgatgcg
aaaagcgcgttcaacagccgggtagaccgccaccacagcctcggtgaaggcaatatcggc
aataccgtatttagctggatcatgaaagatgcgcgtttcgacggcatcccgatgatcctc
gaaaccgtcaatccggatatctggatagatgaaatcgcctggctgaaagcgcagcagaag
tcggagaatgacgaagccgcagcttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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