KEGG   Riemerella anatipestifer CH3: M949_0735
Entry
M949_0735         CDS       T03250                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
rat  Riemerella anatipestifer CH3
Pathway
rat00470  D-Amino acid metabolism
rat00550  Peptidoglycan biosynthesis
rat01100  Metabolic pathways
rat01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:rat00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    M949_0735
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    M949_0735
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    M949_0735
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rat01011]
    M949_0735
Enzymes [BR:rat01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     M949_0735
Peptidoglycan biosynthesis and degradation proteins [BR:rat01011]
 Precursor biosynthesis
  Amino acid ligase
   M949_0735
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3 ATP-grasp_4 CPSase_L_D2 ATP-grasp GARS_A RimK
Other DBs
NCBI-ProteinID: AIH01906
Position
complement(738087..739070)
AA seq 327 aa
MSKKNIAVVMGGYSDEYKVSLKSGQLIYDSLDRDLYNVYKVVVLKEGWFYLDENEAKLPI
QKGDFSVNLPSGEVLRFDVCFNTIHGTPGENGVLQAYWDAIGQKYTGCDFYQSALTFNKK
DTLAVLAKYGIPSAKSFYIKKGEAYDKDEIINELKLPLFVKPNQSGSSLGISKVKEASEF
EAALEKAFLEDDEVLVESFLDGMEVSVGVLDYKGETIVLGITEIIPETEFFDYEAKYQGA
SQEITPARLDEATKLRVEEVAKRAYNSLGMKGFSRSEYIIMGGVPYMLEMNTNPGFSPAS
ILPQQARIYGISIKDLCGNEVEKALAK
NT seq 984 nt   +upstreamnt  +downstreamnt
atgagcaaaaaaaatatagccgtagttatgggcggatactccgatgagtacaaagtttcc
ctaaaaagtggacaactaatttacgactctttagaccgtgatttatataatgtctataaa
gtggtagttcttaaggaaggttggttttatttagatgaaaatgaggctaaactaccaata
caaaagggagatttttctgtaaacttacctagcggggaagtgttacgctttgatgtttgt
tttaataccattcacgggacaccaggtgaaaatggtgtgttacaggcgtattgggacgct
attggtcaaaaatatacagggtgcgatttttaccaaagtgcacttacctttaataaaaaa
gatactttggctgtattagcaaagtatggtattccgtccgctaaaagtttctacataaaa
aaaggagaggcttatgataaagatgaaattatcaacgagttaaaactgcctctatttgta
aagcccaaccaaagtggttcttctttaggaatttctaaggtaaaagaggcttcggagttt
gaagctgctttagaaaaagcatttttggaagatgatgaggttttagtagaaagtttctta
gacggtatggaggtatctgtgggcgtgctagattacaaaggggagactattgttttaggc
attacagagattatcccagagacagaattttttgattacgaagcgaagtatcaaggagcg
tctcaagagattacccctgcaagactagatgaggctactaaactaagagtagaggaggtt
gcaaaaagagcttataactctttaggaatgaaaggattttctagaagtgaatatattatt
atgggcggtgtgccttatatgctagaaatgaataccaatccagggttttcacctgcgagt
atccttcctcaacaagcgagaatttacggtatctccattaaagatttgtgtggaaacgag
gtagaaaaagctctagcaaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (26)   

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