KEGG   Rhodococcus aetherivorans: AAT18_06080
Entry
AAT18_06080       CDS       T03876                                 
Name
(GenBank) helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
rav  Rhodococcus aetherivorans
Pathway
rav03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    AAT18_06080
  09124 Replication and repair
   03420 Nucleotide excision repair
    AAT18_06080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rav03021]
    AAT18_06080
   03400 DNA repair and recombination proteins [BR:rav03400]
    AAT18_06080
Enzymes [BR:rav01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AAT18_06080
Transcription machinery [BR:rav03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     AAT18_06080
DNA repair and recombination proteins [BR:rav03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     AAT18_06080
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom
Other DBs
NCBI-ProteinID: AKE88873
UniProt: A0A059MV36
Position
complement(1314701..1316359)
AA seq 552 aa
MADGPLIVQSDKTLLLEVDHALANEARQAIAPFAELERAPEHVHTYRVTPLALWNARAAG
HDAEQVVDALVTHSRFAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVM
RNKKIAPMLGARLDDDTVIVHPSERGRLKQMLLKVGWPAEDLAGYVDGEAHAINLDFETN
PWHLRDYQEMAADSFWAGGSGVVVLPCGAGKTMVGAAAMAKAGATTLILVTNTVAGRQWK
RELIARTSLTEDEIGEYSGEKKEIRPVTIATYQVITRKSKGEYRNLELFDSRDWGLMIYD
EVHLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWI
APAECVEVRVTLTDAERMTYAVAEPEERYKLCSTAHTKIAVVKSILDRHRDSPTLIIGAY
LDQLDELGEALDAPVIKGSTRNKEREELFDRFRAGELKVLVVSKVANFSIDLPEASVAVQ
VSGTFGSRQEEAQRLGRLLRPKHDGGQAHFYSVVARDTLDAEYAAHRQRFLAEQGYAYRI
TDADDLLGPTIG
NT seq 1659 nt   +upstreamnt  +downstreamnt
gtggccgacggaccgttgatcgtccagtccgacaagaccctgctcctcgaggtcgaccac
gccctcgcgaacgaggcccggcaggccatcgcgccgttcgccgagctcgaacgcgccccc
gagcacgtgcacacctaccgggtcaccccgctggcgttgtggaacgcccgcgccgcggga
cacgacgccgagcaggtcgtcgacgccctggtcacccactcccggttcgcggtcccgcag
ccgctgctcgtcgacatcgtcgacaccatggcccgctacggccggctgcagctggtgaag
aaccccgcacacggcctgaccctggtcagcctcgaccgggcggtgctcgaggaggtgatg
cgcaacaagaagatcgcgccgatgctcggcgcccggctcgacgacgacaccgtgatcgtg
catccgagcgagcgcggccggctcaagcagatgttgctcaaggtcggctggccggccgag
gacctcgccggctacgtcgacggtgaggcacacgcgatcaacctcgacttcgagaccaac
ccctggcacctgcgggactaccaggagatggccgcggactcgttctgggccggcggctcc
ggcgtggtggtgctgccgtgcggggcggggaagacgatggtgggtgcggccgcgatggcc
aaggcgggcgccaccaccctgatcctggtgaccaacaccgtcgcgggccggcagtggaag
cgcgagctgatcgcccgcacgtcgctcaccgaggacgagatcggcgagtactccggggag
aagaaggagatccgcccggtcaccatcgccacctaccaggtcatcacccgcaagtcgaag
ggcgagtaccgcaacctcgagctgttcgactcccgcgactgggggctgatgatctacgac
gaggtgcatctgctgcccgccccggtgttccggatgacggccgacctgcagtcccggcgc
cggctcggcctcaccgcgaccctcgtgcgcgaggacggccgcgagggcgacgtattctcg
ctcatcggccccaagcgctacgacgcaccgtggaaggacatcgaggcgcagggctggatc
gcgcccgcggagtgcgtcgaggtgcgggtgaccctgaccgacgcggaacggatgacgtac
gcggtggccgagcccgaggagcggtacaagctgtgctcgaccgcgcacacgaagatcgcg
gtggtgaagtcgatcctggaccggcaccgcgactcccccaccctgatcatcggggcgtac
ctcgatcagctcgacgagctcggcgaggcgctggacgccccggtgatcaagggctcgacc
cggaacaaggagcgcgaggagctgttcgaccgcttccgcgccggtgagctgaaggtgctc
gtcgtgtcgaaggtcgcgaacttctcgatcgacctgcccgaggcgtcggtggcggtgcag
gtgtcgggcacgttcggctcgcgccaggaggaggcgcagcgcctcggccggttgctgcgc
cccaagcacgacggcgggcaggcgcacttctactcggtcgtcgcgcgcgacaccctcgac
gccgagtacgccgcgcaccggcagcggttcctcgccgaacagggttacgcgtaccggatc
accgacgcggacgatctgctcggccccaccatcggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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