KEGG   Rhodothermaceae bacterium RA: AWN76_009660
Entry
AWN76_009660      CDS       T04780                                 
Name
(GenBank) hypothetical protein
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
rbar  Rhodothermaceae bacterium RA
Pathway
rbar03030  DNA replication
rbar03430  Mismatch repair
rbar03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rbar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AWN76_009660
   03430 Mismatch repair
    AWN76_009660
   03440 Homologous recombination
    AWN76_009660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rbar03032]
    AWN76_009660
   03400 DNA repair and recombination proteins [BR:rbar03400]
    AWN76_009660
Enzymes [BR:rbar01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AWN76_009660
DNA replication proteins [BR:rbar03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AWN76_009660
DNA repair and recombination proteins [BR:rbar03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AWN76_009660
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA AAA_22 RuvB_N AAA_5 AAA_30 AAA_14 Rad17 Cornifin DNA_pol3_delta_C AAA_16 AAA_19 AAA_18 AAA_2 nSTAND3 T2SSE AAA_28 RNA_helicase DnaX_C
Other DBs
NCBI-ProteinID: ARA93394
UniProt: A0A1V0DED9
Position
complement(2368317..2370536)
AA seq 739 aa
MSETRYLVAARKYRPRLFHELVAQEHVTETLKNAIRLDRLAHAYLFSGPRGVGKTTAARI
LAKAINCTTPPEERADAAEPCRACDSCRSFEEGRSLNIIEIDAASNNKVEDIRDLRETVR
VPPQGSRKKVYIVDEVHMLSNAAFNALLKTLEEPPPYVLFIFATTEPNKVLPTILSRCQR
FDFRRIPVPDIVARLQAICATEGITADEASLLLIARKGDGALRDALSAFDQAVSLCGTHL
RYDELAQALGVVGTDLFFEVTDHVAARSSAGMLALVQRIVTAGYDLQEFLAGLAEHLRNL
IVARTMPDPSLIEAAEATRQRYVRVSQDFPEPDLLRLLMIVAEAEEALKSSTQPRLRLEM
ALLKMAALAHTADLRRALAQIDRLEQLVRDGKGAALAAPGTPSVASSPSKREAGPPAAPE
RSAPSTSAPSSPSNRAATPSPAPAPKAAPEPEAAASPEPEASASPEPEAAASPEPEAAAS
PEPEAAASPEPEASASPEPEASASPEPEASASPEPEASASPEPEASASPEPPPSGRGAPP
APASRPAGPSGPSEQPPGYLGLFGAPALRKKSGADSAGDGGAPQDRLPGAPAASADVAVA
VAETGAGASPGLSPLLRFWPSYVRRVRAARIHVGALLDATRPCDLQDGTLRIAVPDVFHQ
RMLDNQHDYLLEHLNEMAPAALRGQSVDRLSFEVQAMATPEAGAETDEATDPSEVLRTLR
EEDPVVRALFEQFGGEIAW
NT seq 2220 nt   +upstreamnt  +downstreamnt
atgtccgaaacccgctacctcgtcgccgcccgaaaataccgcccccggctgttccacgag
ctggtcgcccaggagcacgtcaccgagacgctcaaaaacgccatccggctggaccggctg
gcgcacgcgtatctgttcagcggcccgcggggcgtcggcaagacgacggcggcgcgcatc
ctggccaaggccatcaactgcaccaccccgccggaggagcgcgccgacgccgccgagccc
tgccgggcgtgcgactcctgccgctccttcgaggaaggccgcagcctcaacatcatcgag
atcgatgcggcgtcgaacaacaaggtcgaagacatccgcgacctgcgcgagaccgtgcgc
gtcccgccgcagggcagccgcaagaaggtctacatcgtggacgaggtccacatgctctcc
aacgcggccttcaatgcgctgctgaagacactggaggagcccccgccctacgtcctgttc
atcttcgccacgaccgagcccaacaaggtgctgccgacgattctgtcgcggtgccagcgg
ttcgacttccggcgcattcccgtgccggacattgtggcgcggctgcaggcgatctgtgcc
accgagggcatcacggccgatgaggcctcgctcctgctcatcgcccggaagggcgacggc
gccctgcgcgatgcgctctcggccttcgaccaggccgtctcgctctgcggcacgcacctg
cgctacgacgagctggcgcaggccctcggggtggtcggcacggatctgttcttcgaggtg
accgatcacgtggctgcgcgcagcagcgccggcatgctggcgctggtccagcgcatcgtg
acggcgggatacgacctgcaggagttcctggccgggctggccgagcacctgcgcaacctg
atcgtcgcccggaccatgccggacccgtcgctgatcgaggcggcggaggcgacgcggcag
cgctacgtccgggtgagccaggacttccccgagcccgatctgctgcggctgttgatgatc
gtggccgaggccgaggaggcgctcaagagcagcacccagccccggttgcgtctggagatg
gcgctgttgaagatggccgccctcgcccacaccgccgatctgcgccgggcgctggcgcag
atcgaccggctggagcagctcgtccgcgacggcaagggggcggcccttgcggctccgggc
acgccgtctgtggcatcttccccatcgaagcgcgaggccggcccgcccgccgcgcccgag
cgttctgccccttcgacatcagcgccgtcctccccgtcgaaccgcgcggccacgccgtcg
ccggcccccgcgccgaaggcggcgccggagcccgaggctgccgcatcgccggagcccgag
gcttccgcatcgccggagcccgaggctgccgcatcgccggagcccgaggctgccgcatcg
ccggagcccgaggctgccgcatcgccggagcccgaggcttccgcatcgccggagcccgag
gcttccgcatcgccggagcccgaggcttccgcatcgccggagcccgaggcttccgcatcg
ccggagcccgaggcttccgcatcgccggagccgccgccgtcggggcggggtgctccgccc
gcccctgcctcccgtcccgccggaccgtccggcccttcggagcagccgccggggtatctg
gggctgtttggcgcgcccgcgctgcgcaagaagagcggtgcggattcggccggggatggc
ggggcgccgcaggaccgcctgcccggtgcccctgcggcctcggccgacgtggccgtcgcc
gtcgccgagacgggtgccggggcgagccccgggctgagcccgcttctgcgcttctggccg
tcgtacgtgcgccgtgtgcgcgcggcccgcatccacgtgggggcgttgctcgatgcgacc
cggccgtgtgacctccaggacggcaccctgcgcatcgccgtgcccgatgtctttcaccag
cgtatgctcgacaaccagcatgattatctgctggagcacctgaacgagatggccccggcg
gccctccgggggcaatccgtcgaccggctgtcgttcgaggtgcaggcgatggctacgccg
gaagccggcgcggagacggacgaggccacggacccgtccgaggttctccgtacgctgcgc
gaggaggatcccgtcgtgcgcgccctcttcgagcagttcggcggagagattgcctggtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (114)   
   KEGG ORTHOLOGY (1)   
   RefGene (111)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (144)   

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