KEGG   Robiginitalea biformata: RB2501_09280
Entry
RB2501_09280      CDS       T00992                                 
Name
(GenBank) lysyl-tRNA synthetase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
rbi  Robiginitalea biformata
Pathway
rbi00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:rbi00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    RB2501_09280
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rbi01007]
    RB2501_09280
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rbi03016]
    RB2501_09280
Enzymes [BR:rbi01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     RB2501_09280
Amino acid related enzymes [BR:rbi01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   RB2501_09280
Transfer RNA biogenesis [BR:rbi03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    RB2501_09280
 Prokaryotic type
   Other AARSs
    RB2501_09280
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d NDUFB10
Other DBs
NCBI-ProteinID: EAR17084
UniProt: A4CJH6
Position
complement(1319413..1321104)
AA seq 563 aa
MQLSEQEIIRREKLRQLRELGIDPYPAEKYPVDTLSSSVRENYEEGKHVVMAGRLMSRRI
QGKASFAELQDSAGRIQLYFNRDEICEGEDKSAYNDIYKKLLDIGDIIGIEGELFKTQVG
EKTVRVKRFTLLSKALRPLPLPKKDAEGKVFDEFNDPEQRYRMRYVDLVVNPNVRETFVK
RTKITNSIRRFFNEKGYLEVETPILQPIPGGAAARPFQTHHNALGIPLYLRIANELYLKR
LIVGGFDGVYEFAKDFRNEGMDRTHNPEFTVMELYVAYKDYNWMMETTEQLLERVAREAN
GSTRVSAGGETIDFKAPYPRVPILDAIREHTGIDVDGMDEAALRDAAAGLGIEVDESMGV
GKLIDEIFGECCEHHYVQPTFIIDYPKEMSPLTKAHRSKPGLTERFELLVNGKEIANAYS
ELNDPIDQRERFEEQLKLSEKGDDEAMFIDRDFLRALEFGMPPTSGIGIGIDRLVMLLTD
NSSIQEVLFFPQMKPEKKPLELNDEEKAIVNILRPAAEMDLGILKEKAGLSNKKWDKATK
SLAKKGLFEVSKTEDGLLARFKA
NT seq 1692 nt   +upstreamnt  +downstreamnt
atgcagctttcggaacaagaaatcatccgccgggaaaaactccggcaacttcgcgaactc
ggaatcgacccttacccggccgaaaaataccctgtggacaccctctcctcctccgtacgg
gagaactacgaggaagggaaacacgtggtcatggccggccggctgatgtcccgccgcatc
cagggaaaggcctcttttgcagaattgcaggacagcgccggacggatccagttgtacttc
aaccgggacgaaatctgtgaaggggaggataagtcggcctataacgacatctataaaaaa
ctgctcgacatcggcgatatcatcgggatcgagggggagctctttaagacccaggtaggg
gagaaaacggtccgggtaaagcggtttacgctcctgagcaaggccctgcgccccctgccc
ctgcccaaaaaggatgcggaggggaaggttttcgacgagttcaacgacccggaacagcgt
taccgcatgcggtacgtggacctggtggtaaacccgaacgtccgggagacctttgtcaag
cgaaccaaaatcaccaacagcatccgccgcttctttaacgagaagggctacctggaggtg
gaaacgcccatcctgcaacccatcccggggggtgcggcggcaaggcccttccagacccac
cacaatgcgctgggcattccgctctacctgcgtatcgccaatgaactctatctgaaaagg
ctcattgtcggggggtttgacggggtatacgaatttgccaaggacttccggaacgaaggg
atggaccggacccacaacccggaatttaccgtcatggaactctacgtggcctacaaggat
tacaactggatgatggagaccaccgagcaactcctggaacgggtagcccgggaagccaat
ggcagcacccgggtcagcgccgggggggaaaccatcgacttcaaggcgccctacccaagg
gtcccaatcctggatgccatcagggagcacacggggatcgacgtggacggcatggacgaa
gccgccctgcgggacgcggcggccggcctggggattgaggtagacgagagcatgggcgtg
ggcaagctgatcgacgagatcttcggcgaatgctgcgaacaccactatgttcaacccact
tttatcatcgactaccccaaagagatgagcccgcttaccaaggcccaccggtccaaaccc
gggcttaccgagcggttcgaactcctggtcaacgggaaggagatcgcgaacgcctactcc
gagctgaacgacccgatcgaccaaagggagcggtttgaggagcaattaaagctctccgag
aaaggcgacgacgaagcgatgttcatcgaccgggatttcctgcgggccctcgagttcggg
atgcccccgacttccgggatcgggatcgggatcgaccgcctggtgatgctgctcacggac
aactcctccatacaggaagtattgttcttcccccagatgaaaccggaaaagaagccgctg
gagctcaacgacgaggaaaaagccattgtgaatatcctccggcctgccgccgaaatggat
ctcggcatcctgaaggaaaaggccggcctgagcaacaaaaaatgggataaggctaccaag
tccctggctaaaaaggggttgtttgaggtgtccaaaacggaagacggcctcctggcccgg
tttaaagcttga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (47)   

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