KEGG   Ruminococcaceae bacterium CPB6: B6259_10010
Entry
B6259_10010       CDS       T04880                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
rbp  Ruminococcaceae bacterium CPB6
Pathway
rbp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rbp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B6259_10010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rbp03019]
    B6259_10010
   03016 Transfer RNA biogenesis [BR:rbp03016]
    B6259_10010
Enzymes [BR:rbp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     B6259_10010
Messenger RNA biogenesis [BR:rbp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     B6259_10010
Transfer RNA biogenesis [BR:rbp03016]
 Prokaryotic type
  tRNA degradation factors
   B6259_10010
SSDB
Motif
Pfam: RNase_PH S1 RNase_PH_C PNPase KH_1 SPATA25 KH_2 S1_2 FadA
Other DBs
NCBI-ProteinID: ARP51181
UniProt: A0A1W6WFX1
Position
complement(2029412..2031583)
AA seq 723 aa
MFENSRTYRTSLAGRELQIETGKLAQLANGACMVRYGETAVLCTATASSQPREGVDFFPL
SVDYEEKMYAVGRIPGSFLRREGKPPEEAVLAGRLIDRSIRPLFPKDMRNDVTVSCIVMS
LDPDCSPVIAALLGASAALSISDIPWGGPVAAVCVGLAPDGTFLINPTEEQRKDSRMAVT
VASAGERMVMIEAGAKIVADEEMYQGILTGHRANMELLPLFRTMREEIGKEKFTYTAEHA
SDEMQDDVAVYALDAVRAAMDTSDKMVRDTRLQKVYADVFAHFAEQYPDSEKQLDESLYK
LQKYVVRRWLLDEKKRVDGRGMDEIRPLAAEVDLLPRVHGSGLFTRGQTQVLTTVTLGQV
SDAQTLDDLGETKEKRYMHQYNFPSYSVGETKPGRGPNRREIGHGALAERALLPVIPSVD
EFPYAMRVVSEVLSSNGSTSQASICGSTLALMAAGVPIQAPVAGISCGLVTEGEHWMTMV
DIQGIEDFFGDMDFKVAGTKEGITAIQMDLKIQGLTPAMVREALLKTHKARNEIIDGVLL
KAIPAPRGKLSKWAPKMETVQIPVDKIREVIGTGGKVIRQICSECNVQMDVKEDGHVYVS
GQEEAGTQRALDIIHTIVEGPKPGRIYCGKVTRLIDFGAFVEIAPGKEGLVHISQLDIKP
VNKVTDVVKVGDSVMVKVVEIDSRGRLNLSCREARIELEGLNPADLPAPQPRENAHRRPT
KPR
NT seq 2172 nt   +upstreamnt  +downstreamnt
atgtttgagaacagcaggacctaccgaacttcacttgcaggtcgtgaactgcagatagaa
acaggaaagcttgcgcagctggcaaacggcgcctgtatggtgcgctacggtgaaacggcg
gtgctgtgcactgccacagccagcagccagccgcgggaaggtgtggattttttcccgctg
tcggtagattatgaggaaaaaatgtacgcggtcggccgcattcccggttcctttcttcga
cgggagggaaagccgccggaagaagccgttttggcgggccgcttaattgaccggtccatt
cgtccgctgttcccaaaggatatgcgcaacgatgtgaccgtgtcctgtatagttatgagc
ttggacccggattgttcgccggtcattgcggcactcctcggcgcaagcgcggcactgtcc
atttcggatattccgtggggaggaccagtcgctgccgtatgtgtgggccttgcaccggat
ggaacttttctcatcaatccaacggaagaacaaagaaaagacagccgtatggctgtaacg
gtcgcttccgcaggggaacgcatggtgatgatagaggcaggtgccaaaattgttgcggat
gaggaaatgtatcagggcattttgacggggcaccgtgccaacatggagctgttgccgctt
tttcggactatgcgggaagaaatcgggaaagaaaaatttacatatacagcagaacacgcc
agcgatgagatgcaggacgacgtggcagtgtacgcattggacgctgtgcgcgcggcgatg
gataccagcgacaaaatggtgcgggacacacgtctgcaaaaagtgtatgcggatgttttt
gcgcattttgcggaacaatatccagacagtgaaaaacagctggacgagagcctgtacaaa
ctgcaaaaatatgttgtgcgccgctggctgctggacgagaaaaaacgggtagacggccgc
ggaatggacgagattcgcccgctggcggcggaagtagacctattgccgcgcgtccatggt
tccggcctgtttacccgcggccagacacaggtccttacaaccgtgacgctcgggcaggtg
agtgatgcgcagacactggacgacttgggtgagaccaaagaaaagcgctatatgcatcag
tataatttcccgagttacagcgttggcgaaacaaaacccggccgcgggccaaaccgccgt
gaaatcggacacggcgcgctggcggagcgggcacttctgccggtcattcccagcgtggat
gaattcccgtatgccatgcgggttgtcagtgaggtgctttcctccaatggttccacgtca
caggcaagcatctgtggcagcacactggcactgatggcagccggcgtgcccattcaagcg
ccggtggcgggcatttcctgcgggctggtcacggagggcgagcactggatgaccatggtg
gacatacagggcattgaggatttcttcggagatatggattttaaggtggctggtaccaaa
gaaggcattacggctatacagatggacctgaaaatacaggggctgacaccggcaatggtg
cgggaagccctgctgaaaacgcacaaggcacgtaacgaaatcattgatggggttctttta
aaggcgattcccgcgccgcgcggaaagctttccaaatgggcaccgaagatggagacggtg
cagattccagtcgacaagattcgagaagttattggcacgggcggaaaggtcattcggcag
atatgcagtgagtgcaatgtacagatggacgtcaaagaggacggccacgtttatgtttcc
ggccaggaggaagcgggcacacagcgcgcgttggacattattcacaccattgtggaaggg
ccaaaacccggcagaatatactgcggcaaggttacccggctgatagacttcggcgcattt
gtggaaattgcccccggaaaagagggattggtacacatttcacagctggatatcaaacct
gtgaacaaggtgacagatgttgttaaagtaggtgattctgtcatggttaaggttgtggaa
atagacagccgcggcaggctaaacctttcctgtcgggaagcgcgcattgagctggaaggg
ctaaatccagcggatctgccggcaccacagccgagggaaaatgcccaccgcaggccgaca
aaaccccgttag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (51)   

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