KEGG   Ruminococcus champanellensis: RUM_13370
Entry
RUM_13370         CDS       T02600                                 
Name
(GenBank) pseudouridylate synthase I
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
rch  Ruminococcus champanellensis
Brite
KEGG Orthology (KO) [BR:rch00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rch03016]
    RUM_13370
Enzymes [BR:rch01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     RUM_13370
Transfer RNA biogenesis [BR:rch03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    RUM_13370
 Prokaryotic type
    RUM_13370
SSDB
Motif
Pfam: PseudoU_synth_1 Hira
Other DBs
NCBI-ProteinID: CBL17459
UniProt: D4LCW4
Position
1470052..1470873
AA seq 273 aa
MRTLKCMMAYRGTKYHGFQRQDNAHTVQEAVEQALGSVLNHPATIYGCSRTDTGVHARQY
CFSFQTERPIQPLNLVRGVNGRLPDDISLLSAEDAALSFHARYACRGKEYLYLIHNSESP
NPFLRDLACHHRRPIDPALLQACADRFIGTHDFKSFCSAQAQRTSTVRTIYDFSVEMSGD
SIILLVKGDGFLYNMIRILVGTMLQVNDGKLKLSDLDGILAARDRRCAGKTAMACGLYLN
RVFYDDAYQTEPKKGLRIVKKEMEPVPVPGWIR
NT seq 822 nt   +upstreamnt  +downstreamnt
atgcgaaccctcaaatgcatgatggcataccggggcacaaagtatcacggctttcagcga
caggataatgcccacaccgtccaggaggcggtggagcaggcgctgggcagtgtgctgaac
catccggcgaccatttacggctgttcccggacggatacgggggtgcatgcccggcagtat
tgcttttcctttcagacggagcgtccgatccagccgctgaatctggtgcggggggtcaac
ggcaggttgccggatgatatttccctgctcagtgcggaggatgcggcactgtcgtttcac
gcccggtatgcctgccgggggaaagaatacctgtatctgatccacaacagtgaatccccc
aacccgtttctgcgggatcttgcctgtcaccaccgacgccccattgatccggcattgcta
caagcctgtgcggatcgctttatcggcacccatgacttcaaaagcttttgcagcgcccag
gcacagcgtaccagtactgtccgcaccatctatgatttttctgtagaaatgagcggagat
tctataatactacttgtcaaaggcgatggttttctgtataatatgattaggatccttgtg
ggcaccatgctgcaggtcaatgacggcaagctgaagctttcggatctggacggaatcctg
gcagcccgggatcggcgatgcgccggaaaaaccgcaatggcatgcggtttgtatctgaac
cgggtgttctatgacgatgcatatcagacagagccgaaaaaaggactccggattgtaaaa
aaggagatggagccggtacccgttccgggatggatccggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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