KEGG   Ricinus communis (castor bean): 8263730
Entry
8263730           CDS       T01087                                 
Name
(RefSeq) WD repeat-containing protein RUP2
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu04120  Ubiquitin mediated proteolysis
rcu04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    8263730
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    8263730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rcu04121]
    8263730
Enzymes [BR:rcu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     8263730
Ubiquitin system [BR:rcu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    8263730
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     8263730
SSDB
Motif
Pfam: WD40 YNR034W-A-like WD40_like Ribosomal_60s
Other DBs
NCBI-GeneID: 8263730
NCBI-ProteinID: XP_002528808
Position
8:22366426..22368013
AA seq 426 aa
MGTFRWFKRRKPCKIHAYARYPGWAMKNFSDDQIHHPANRIEAPEAAKQLQESQARQEKQ
PEEEEEEERARCEWGFSLKTVVSSSSSSTSGGGAVSPDALGVIEFDQSENIVATGGIARK
IRIYSIKSLLPQEQQHENGNDIALMDHVNACEFFICTPAKLSSLRWKPCSGGRVIGSGDY
DGVVMEYDVETRIPIFERDEHGGRRIWSVDYSHWSPVVGASGSDDGTMQMWDPRHEGGGC
VATVKPSVTSSCRAVCSVEFNPFGGSIIAVGCADRRVYGYDVRMITNPVFVLDGHKKTVT
YVRFMDNGTLASAGIDGCLKLWNLQDSQLLRTYKGHLNSRNFVGLSVWRNGGLLGCGSEN
NQVFVYDKRWSEPIWAYGSGPAADHGFVNSVCWSQVGEDRCTLVTGGSNGVLQVFEGKRK
PCIITS
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgggaacctttcgttggttcaaacgcagaaaaccctgcaaaattcatgcttacgcaaga
taccctggatgggcaatgaaaaacttctccgatgatcaaattcatcaccctgcaaataga
attgaagctccagaagcagcaaaacaacttcaagaaagccaggcccgacaagaaaaacag
ccagaagaagaagaagaagaagaaagagcaagatgtgaatggggtttcagtcttaagact
gtggtttcctcaagtagttctagcactagtggaggaggagctgtatcaccagatgccctt
ggcgtaattgaatttgaccaatctgaaaacatagttgctacaggtggaatagctcgaaag
ataagaatttatagcatcaaatctttgttaccacaagaacaacaacacgaaaatggaaat
gacatagctttaatggaccatgttaatgcatgtgaatttttcatatgtaccccagctaag
ctcagcagtctccgatggaaaccctgctcaggtggccgggttataggttcaggagattat
gatggagttgttatggagtatgatgttgaaacaaggataccaatttttgaacgtgacgag
cacggtggccgccggatatggagcgtggattactctcactggagtcctgttgtaggcgca
tccggatctgatgatgggaccatgcaaatgtgggacccacgacacgagggtggtggatgt
gtggctacagttaaacctagcgtgacaagcagctgcagggccgtgtgttctgtggagttt
aatccatttggtggatcaattatagccgttggatgtgctgacaggagggtatatgggtat
gacgttaggatgattaccaatcccgtattcgtcctagatgggcataaaaagaccgttaca
tatgttagatttatggataatggtacattggcttctgcgggcattgatggctgcttaaag
ctatggaatttacaggattcgcaattgcttcgcacgtacaaagggcacctcaatagccga
aacttcgttgggttatcagtgtggaggaacgggggtttgctgggatgcgggtctgagaac
aatcaagtgtttgtgtacgacaagaggtggtcggaacccatttgggcgtatgggtccggg
ccagcggctgaccatgggtttgtaaacagtgtttgctggagccaagttggtgaggacaga
tgcacactagtgacaggaggatcaaatggggtattacaagtttttgaaggcaaaaggaag
ccatgtattattaccagttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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