KEGG   Ricinus communis (castor bean): 8268347
Entry
8268347           CDS       T01087                                 
Name
(RefSeq) proteinaceous RNase P 1, chloroplastic/mitochondrial isoform X1
  KO
K18213  proteinaceous RNase P [EC:3.1.26.5]
Organism
rcu  Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rcu03016]
    8268347
Enzymes [BR:rcu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     8268347
Transfer RNA biogenesis [BR:rcu03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    8268347
SSDB
Motif
Pfam: PRORP PPR_long PPR_2 PPR_3 RNase_Zc3h12a
Other DBs
NCBI-GeneID: 8268347
NCBI-ProteinID: XP_002514281
Position
3:complement(27223048..27228133)
AA seq 888 aa
MASFTFDTLQQKHCSSIILCKYPSSLSPSSSSLNTLSFLCLSHFLTFSPPKHTPFCVLKA
HVSNIRTKISIQNDQSPIKTITLGVRKENGPGFSSLRTGGERVERQLLNNIVGSVLDEKI
DTKDKNTRKRLGYKKWRDFGSGNMSTRYKGATKERKYMDNQLISGRMEKKPRKGSDNKVK
EEKSGKWSKRNKGDPQEVKFRLELDKCCKRGDVMAAIQLYDLAQREGIKMGQYHYTVLLY
LCSSAAAGVVQPGKSGRGGRASNSLAVSDEVSSASVVEFRELRDKNDVDATESDTKILNN
VNKVIDSGRNPGSKDKMELKSSNRFNDSDSTSNERKNLSQIPIVVSDSNYQQLECLSFPA
KNNDGKYHDGNGILVSEDIKKYALERGFEIYEKMCMDKIPMNEATLTAVARIAMSMGNGD
MAFDMVKQMKLLGLNPRLRSYGPALAAFCSSGDADKAFTVEKHMLDHGVHPEEPELEALL
RVSVEAGKGDKVYYLLHKLRTSVRKVSPSTANIIIEWFKSKAASRVGKTKWDKRVVKEAI
ANGGGGWHGQGWLGKGKWTVSCSSVGVDAFCKSCGKKLATIDLDPTETESFAESVASIAI
KREKDSSFQKFQKWLDYYGPFEAVVDGANVGLLGQKRFIPSKINAIANGIRQKLPSKKWP
LIVLHNRRVTGHKMDEPVNKSLVEKWKHADALYATPTGSNDDWYWLYAAIKFKCLIVTND
EMRDHTFQLLGNDFFPKWKERHQVHFGFSDAGPVFHMPPSFSVVIQESENGHWHIPIASD
TDYEPERAWLCITRAKLPLPRKDSITIKPEESQFVKRSSGQAKLPTKTRVKAKQGTLNHG
SDEDNSPEQVYKNLRNILSASGFTDHRTVLSEIEAAEKLGDSVIDFQI
NT seq 2667 nt   +upstreamnt  +downstreamnt
atggcctccttcaccttcgacactctgcagcaaaaacattgctcttctatcattctctgt
aagtacccatcctctttatccccatcatcctcatctcttaataccctcagtttcctttgt
ttgtctcattttcttaccttctctcctccgaagcacacacctttttgtgtacttaaagca
catgttagcaacattcgaacaaagatatccattcaaaatgatcaaagtcccataaagact
ataactttgggagttagaaaagaaaatggtcctggattttcttctttaaggactggaggt
gaaagggtagagagacaattgttaaataatattgttggttcagtactggatgaaaagatt
gacacgaaggataaaaatacaagaaagcgtttgggttataaaaaatggagggactttggc
tctggaaatatgtctactaggtataaaggtgcaactaaagagaggaaatatatggataat
caactaattagtggtagaatggagaaaaaaccaagaaaaggtagtgataataaggtgaaa
gaagagaaaagtggaaaatggtccaaaagaaataaaggtgatcctcaagaagtgaaattt
agactggagttagacaaatgttgtaagaggggggatgtaatggccgcaattcaactatat
gatttagctcaaagagaaggaatcaagatggggcagtaccattatactgtacttttgtat
ctttgttcctctgctgctgcaggtgttgttcaaccaggaaaaagtggtcgtggtggtcga
gcctcaaattccttagcggtctctgatgaagtttctagtgcaagtgtggtggagttcaga
gaattaagagataaaaatgatgtcgatgctactgaatcagacactaagattttgaataac
gtgaataaagtaattgacagtggtagaaatcctggaagtaaagataaaatggagctaaaa
tctagtaatagatttaatgattcagatagcacttcgaatgaacggaagaatttatcccag
attccaattgttgttagtgattcgaactatcaacaattggaatgtctaagtttccctgca
aagaataatgatggcaaatatcatgatggtaatggaattctggtaagtgaagatatcaaa
aagtatgctcttgagagaggatttgagatctatgagaagatgtgtatggataagatccca
atgaatgaagcaaccttgactgctgtggctaggatagcaatgtcaatgggtaatggtgat
atggcctttgatatggtgaagcaaatgaagctgttgggactaaatcctagattgcggtcc
tatggtccagctctcgctgccttttgcagtagtggagatgctgataaagcatttactgta
gaaaaacacatgttggatcatggtgtgcatccagaagaacctgagttagaggcactgtta
agagtaagtgtcgaagctggtaaaggtgacaaagtttattatttgttgcataagttgaga
actagtgtgagaaaggtctcaccctcaactgcaaatataattattgaatggtttaaaagc
aaggcagcttcaagagtggggaaaacaaaatgggataagagggttgttaaagaggcaatt
gcaaatgggggtggaggatggcatgggcagggctggctgggtaagggaaagtggacggtt
tcttgttcatctgttggagttgatgcattttgtaaatcttgtgggaagaagttggctacc
attgaccttgatcctacagagacagagagttttgctgaatcagttgcttctattgccata
aagagagaaaaggattcaagctttcaaaagtttcaaaaatggcttgactattatggaccc
ttcgaagctgttgtagatggagctaatgtaggtcttcttggccaaaagagattcattcca
tccaagatcaatgccattgctaacggaattcgccagaagcttccttcaaaaaagtggcca
cttatcgttctgcacaacaggcgagtcactggacacaagatggatgaaccagtaaataag
tcattggttgagaagtggaaacatgccgatgcactttatgcaactcctactggatcaaat
gatgattggtactggttgtatgcagctataaagttcaagtgcttaatcgtgaccaatgat
gagatgagagaccatacatttcaacttctaggaaatgacttcttccctaaatggaaagaa
aggcatcaagtacatttcggtttttctgatgctggcccagtttttcacatgcctcctagt
ttttctgttgtaattcaggaatcagagaatggccactggcatattccgattgcatcagac
actgattatgaaccagaaagagcatggttatgcatcacacgtgctaagttacctctgcca
cggaaagattctatcactatcaagcctgaagagtcccaatttgttaaacgaagcagtggg
caagctaagttgcctacaaaaactagagttaaagcaaagcaaggcacattgaatcatgga
agtgatgaagataactcccctgaacaagtctacaagaatctaagaaatattctgtcggca
tctggattcacagatcatcgaacagtcttatcagaaattgaggcagcagagaagcttggt
gactctgtgattgactttcagatctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (45)   

Download RDF
DBGET integrated database retrieval system