KEGG   Ricinus communis (castor bean): 8272499
Entry
8272499           CDS       T01087                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X1
  KO
K01309  ubiquitin carboxyl-terminal hydrolase MINDY-1/2 [EC:3.4.19.12]
Organism
rcu  Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rcu04121]
    8272499
Enzymes [BR:rcu01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     8272499
Ubiquitin system [BR:rcu04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   MINDY
    8272499
SSDB
Motif
Pfam: MINDY_DUB
Other DBs
NCBI-GeneID: 8272499
NCBI-ProteinID: XP_002509683
UniProt: B9RBZ9
Position
5:24584444..24592700
AA seq 730 aa
MEMASASSSSPTTTEEQNQQQQQLQQAAAVKEKEKEKEKECVHKTKTIQFLGRTAPIVLQ
NDNGPCPLLAICNILLLRNNLNLSPDIAEVSQEKLLSLVAEHLIDSNSNVNNKDAGYVEN
QQQNIADAIDLLPRLATGIDVNIKFRRIDDFEFTPECAIFDLLDIPLYHGWIVDPQDYDT
AIAIGSKSYNAIMGELVALETQVMEGESKNNAEEDSVDFVAATTATLGVPSPCLSKTRSF
DDSPHSVSDNQSLRKGDLEEEAELLMALKLSEAELPTSTGNMLVADVSEGVLSAASDKHT
SSKESVPVSSVDMLKGHVGTAHGDTALSNDHNNLKSVETLLGDMTCSPSMTDLSKPMETL
PGEITGSPSKTTDQSNLPDLSTYKESREHNASTDIAKNCNIKMSVQIEDTLTQSENFVLA
NEDGIVFSRGGEMVKSPLESIANVHEAADISSGRDPAEASGLSMPNPDSDSSSGRLQNVD
VTETFTSSVDGSEPIYEGEECILDSGTATFEDREPMYEGEVILAEQADKSVRLKDEITPQ
QGELIKNFLKNNASQLTFYGLFCLQDGLKERELCVFFRNNHFSTMFKYDGELYLLATDQG
YLNQPDLVWEKLNEVNGDTLFMTGNFKEFKVENQGNDTWNEHNAMASTADYIASFDNAAQ
AGLDINSDLQLAIALQQQEFEQQQPQRSNVQQPVSGNSRLVTGPQVQRSSGKYSSSSRPE
AKSKDKCIVM
NT seq 2193 nt   +upstreamnt  +downstreamnt
atggaaatggcttcagcttcttcatcgtcgccgacgaccaccgaagaacagaatcaacaa
caacaacaactacaacaagcggcggcagttaaagagaaagagaaagagaaagagaaagag
tgcgttcataaaacgaaaacgatacagtttttaggccgcactgctcctatcgttttgcag
aacgacaatggaccttgtcctctcctcgctatttgtaatattcttctgctgaggaacaat
ttaaatttgagcccagatattgctgaagtttcacaggagaaactgttatcactggttgca
gaacatttgattgattccaacagtaatgtaaataataaagatgcaggctatgttgaaaat
caacagcagaatattgcagatgccattgatttgcttccgcgtcttgcaactggaattgat
gtaaatataaagtttaggaggatagatgatttcgagtttaccccggaatgtgccatattt
gatcttcttgacattcctttatatcatggttggatagttgatccacaagattatgatact
gctattgctattgggtcaaagtcctataatgctattatgggagagcttgttgcccttgaa
acacaagtcatggagggtgaaagtaaaaataacgctgaggaagattctgttgattttgtt
gctgctactactgcaactttgggtgttccttctccctgtctttccaaaaccagatctttt
gatgattctccacattcagtctctgataaccaaagtttaaggaaaggggacctagaagaa
gaagcagagctgttgatggccttaaaattatcagaggctgaattacccacttctacgggt
aatatgctagtagctgatgttagcgaaggagttctatctgctgcttcagataaacataca
agttcaaaggagtcggtgcctgtaagttctgtagatatgttgaaggggcatgtaggtact
gctcatggtgatactgctttgagcaatgatcataataatctcaaatctgtggaaactctt
ctcggggatatgacatgttctccctcaatgactgatctgagcaagcctatggaaactctt
ccaggggaaataacaggttctccctcaaagacgactgatcagagtaacctccctgatctg
tcaacttataaggaatccagagaacataatgcttctactgacattgctaagaattgtaat
attaagatgtcagtgcagattgaagatacattgactcaatcagaaaattttgtattggca
aatgaagatggtattgttttttctcgaggaggtgaaatggttaagagtccattagagtcc
atagctaatgttcatgaagcagcagatatttcaagtgggcgtgatccagcagaagcatca
gggttatctatgccaaacccagattcagactcgtctagtggcagactgcagaatgtggat
gtaactgaaacgttcacttctagtgttgatggcagcgagcccatttatgaaggagaagaa
tgcatcttagattcaggaactgcaacttttgaagatcgagagcctatgtacgaaggtgag
gtcattcttgcagaacaagctgataaaagtgtgaggttgaaggatgaaatcactccacaa
caaggagagctgataaagaactttttgaagaacaatgctagtcagttgacattttatggt
ctattttgcttacaagatgggctcaaagaacgcgagctttgcgtttttttccgcaacaat
cacttcagcacaatgtttaagtatgatggtgagctttatcttttagctacagaccaaggt
tatttgaatcagcctgatttggtgtgggagaaactaaatgaggtcaatggcgatacattg
ttcatgacaggcaacttcaaagaatttaaggtggaaaatcaagggaatgatacatggaat
gagcataatgctatggccagtactgctgactatattgccagctttgataatgcagcacaa
gcgggtttggatataaactctgatctgcagctagcaatagctctacaacaacaggagttc
gagcagcagcagccacaacgctctaatgtacagcaacctgttagtggcaattcaagactg
gtcacaggtccccaggtgcaaagaagcagtgggaaatattcatcatcttccaggcctgaa
gcaaaatcaaaggataagtgtattgtgatgtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (28)   

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