KEGG   Ricinus communis (castor bean): 8274320
Entry
8274320           CDS       T01087                                 
Name
(RefSeq) transcription initiation factor IIB isoform X2
  KO
K03124  transcription initiation factor TFIIB
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    8274320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rcu03021]
    8274320
Transcription machinery [BR:rcu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     8274320
 Prokaryotic type
  Archaeal type
    TFB
     8274320
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Cyclin_N Ribosomal_S27e RB_B Zn-ribbon_8
Other DBs
NCBI-GeneID: 8274320
NCBI-ProteinID: XP_002513521
UniProt: B9RIF2
Position
4:complement(31193451..31195877)
AA seq 312 aa
MADTYCPDCKRPTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESADNDPVRVG
GPSNPLLADGGLSTVISKPTGASGDFLTSSLGRWQNRGSNPDRSLIQAFKTIATMSDRLG
LVATIKDRANEIYKKVEDQKPLRGRNQDAVLAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLEVELGQSMEMGTIHAGDFLRRFCSHLGMNNQAVKAAQEAVKKSEEL
DIRRSPISIAAAIIYMITQLSEEKKLLKDISTSTGVAEGTIRNSYKDLYPYASRIVPSWY
AKEEDLINLCSP
NT seq 939 nt   +upstreamnt  +downstreamnt
atggctgacacgtattgccctgattgtaaacgtccaacggaggtcgtttttgaccactcc
gccggcgacaccgtttgttcagagtgcggtcttgttctcgaatctcattccatcgatgaa
acctctgaatggagaacttttgctaacgaatcagctgataatgaccctgttcgtgttggt
ggtccttctaatcctcttcttgctgacggtggtctctccaccgtcatttctaagcctact
ggtgcttctggtgatttcttgacctcttctttgggtcgctggcagaaccgtggctccaat
cctgatcgttctcttatccaagctttcaaaactattgctaccatgtctgataggttgggc
cttgttgcgaccattaaggatcgagctaatgaaatttacaaaaaagtagaagatcaaaag
cctctcagaggtcggaatcaggatgcagttttagccgcttgcctttacattgcttgtcga
caagaagacaaaccccgcacagtgaaagaaatatgttcagttgctaatggagccacaaag
aaggagattggccgtgcaaaggagtatattgttaagcagctggaggtggagcttggccaa
tctatggaaatgggaacaatacatgctggggactttctgagacgtttttgctctcacctt
gggatgaacaatcaagcagttaaagcagctcaagaagctgtgaagaaatctgaagagctt
gatataaggcgaagcccaatatcaatagcagcagcaatcatttacatgataactcagctt
tcagaggaaaagaaacttctgaaagatatatcaacttcgacgggagtggctgaagggacc
atcagaaattcctacaaggacctctatccgtatgcttccaggattgtaccaagctggtat
gccaaggaggaagacctcatcaacctctgtagtccttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (24)   

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