KEGG   Ricinus communis (castor bean): 8275948
Entry
8275948           CDS       T01087                                 
Name
(RefSeq) threonine--tRNA ligase, chloroplastic/mitochondrial 2
  KO
K01868  threonyl-tRNA synthetase [EC:6.1.1.3]
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    8275948
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rcu01007]
    8275948
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rcu03016]
    8275948
Enzymes [BR:rcu01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.3  threonine---tRNA ligase
     8275948
Amino acid related enzymes [BR:rcu01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   8275948
Transfer RNA biogenesis [BR:rcu03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    8275948
 Prokaryotic type
    8275948
SSDB
Motif
Pfam: tRNA-synt_2b HGTP_anticodon tRNA_SAD RPA_interact_M
Other DBs
NCBI-GeneID: 8275948
NCBI-ProteinID: XP_048233274
Position
7:22578411..22582638
AA seq 680 aa
MFMLHKMATSPSLSSFSLFLSKPKSLTVLKPSLLLHSPLKRFVSLSKLQPQSQAGNLEAV
YRKRNGLSISTAVATTESAPVAQNDIAEDTQKEETEKIVLPTNESSEKLLRIRHTCAHVM
AMAVQKVYPEAKVTIGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIIGQNLPLVREEVS
REEAQKRIMAVNEPYKMEILDSIKEDPITIYHIGDEWWDLCAGPHVESTGNINRKAVELE
SVAGAYWRGDEKRPMLQRIYGTAWENENQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQDE
AGGGLVFWHPKGAIVRHIIEDSWKKIHIEHDYDLLYTPHVAKADLWKISGHLDFYRENMY
DQMKIEDENYQLRPMNCPYHILVYKRKLNSYRDFPIRVAELGTVYRYELSGSLHGLFRVR
GFTQDDAHIFCLEDQIKDEIRGVLDLTEEILLQFGFRKYEVNLSTRPDKSVGDDDIWEKA
TTALRDALDDKGWTYQIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDITY
VDSNSEKKRPIMIHRAVLGSMERFFGVLIEHYAGDFPLWLSPIQVRVLPVTDTQLEYCRE
VTSKLKENGIRTELFHGERLPKLIRNAEKQKIPLMAVVGPKEVETQSVTIRSRFSGELGT
MTIDDFISRIKSAIEKRTSL
NT seq 2043 nt   +upstreamnt  +downstreamnt
atgtttatgttacacaaaatggccacatctccttctctttcctcattctctctcttcctc
tctaaacccaaatcacttacagtcttaaagccctcactcctccttcactctcctcttaaa
cgttttgtttcgctatctaaactgcaaccccaatcccaagcgggaaacttggaagccgtt
tataggaaaagaaatggcctttctatatccactgctgttgctactactgagtcagctcct
gttgcccaaaatgacattgctgaggatacccagaaagaggaaactgagaaaattgtgctt
cccactaatgaatcatctgagaagctgctgagaatccgccacacgtgtgcacatgtcatg
gctatggctgttcaaaaggtctatccagaagcaaaagtgacgattggaccgtggatagaa
aatgggttttattacgattttgatatggagcctctgactgataaagatctcaagaggatt
aagaaggagatggatcgcatcattggtcaaaatttaccacttgtgagagaagaagtttct
agagaggaagctcagaagagaataatggctgttaatgaaccttacaagatggagattttg
gatagcattaaagaagatcccattactatttaccatattggtgatgaatggtgggatctt
tgtgctgggcctcatgtcgaaagtaccggcaatatcaataggaaagctgttgaacttgaa
tctgttgcgggtgcttattggagaggggatgaaaaaagaccaatgctgcagcggatctat
ggaacagcttgggagaatgaaaatcaattgaaggcctatcttcacttcaaagaagaagcc
aaacgacgagatcataggcgtcttgggcaagatctagatctcttttctatacaggatgaa
gctggtggaggtctagtcttctggcatccaaagggtgccatagttaggcacattattgaa
gactcatggaagaaaatacatatagaacatgattatgatttgttatatacaccccatgtg
gcaaaggctgatctctggaagatcagtggtcatctggacttctacagagagaacatgtat
gatcagatgaagatcgaggatgaaaattatcaacttcgacctatgaattgcccttaccac
attttggtgtacaaaagaaagcttaattcctaccgtgattttccaatcagggttgcagag
cttggaacggtatacagatatgagttgtctggaagcttacacggccttttccgtgtaaga
ggttttacccaggatgatgcacacatattttgtttggaggatcaaattaaagatgaaatt
aggggggtcctagatcttacggaagagatactattgcaatttggtttcaggaaatatgaa
gtgaatctctcaactagaccggataaatctgtgggagacgatgatatatgggagaaagca
acaactgccttgagagatgctttggatgataaggggtggacctatcaaattgatgaaggt
ggtggtgcgttttatggtccgaagattgatcttaagattgaggatgctcttggaaggaag
tggcagtgttcaactatccaggttgattttaatttacctcagcggttcgacattacttat
gttgattcgaactcagagaagaagcggcctataatgatacatagagcagtgctcggatcc
atggaaaggttctttggggtcttgatagagcattatgctggggattttcctttgtggctc
tctcctatccaagttcgagttttaccggttactgacacacagcttgaatactgcagagaa
gtgaccagtaaactgaaagagaatggcattcgaacggaacttttccatggcgagcgtttg
ccgaagctcattagaaatgcagagaagcagaaaattccgttaatggcagtagtaggaccc
aaagaggttgagactcaaagtgtcacgatcagatctaggttcagtggggaacttggcacc
atgacaattgatgattttatcagcagaattaagtctgcgattgaaaagagaacttcatta
tga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (47)   

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