KEGG   Ricinus communis (castor bean): 8286134
Entry
8286134           CDS       T01087                                 
Name
(RefSeq) alanine--tRNA ligase
  KO
K01872  alanyl-tRNA synthetase [EC:6.1.1.7]
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    8286134
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rcu01007]
    8286134
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rcu03016]
    8286134
Enzymes [BR:rcu01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.7  alanine---tRNA ligase
     8286134
Amino acid related enzymes [BR:rcu01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   8286134
Transfer RNA biogenesis [BR:rcu03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    8286134
 Prokaryotic type
    8286134
SSDB
Motif
Pfam: tRNA-synt_2c tRNA_SAD DHHA1
Other DBs
NCBI-GeneID: 8286134
NCBI-ProteinID: XP_015582068
Position
8:complement(28680550..28694336)
AA seq 1024 aa
MKRITSTAAAAASSSLSVTLHRTALHSPHLLAAIVVAAARVSLLHPSRATLFASFSSSSS
SPLLSHIAAMPGVDPQEMEWPAKKVRDTFISFFEDKKHVHWKSSPVVPVNDPTLLFANAG
MNQFKPIFLGTADPNTALSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS
FGDYFKREAIGWAWELLTKIYKLPADRIYATYFGGDEKAGLAPDAEARDFWLQFLPPERV
LPFGCKDNFWEMGDTGPCGPCTEIHYDRVGNRDASQLVNNDDPTCIEIWNLVFIQFNRES
DGSLKPLPAKHVDTGMGFERLTSVLQNKMSNYDTDVFLPIFDAIQQATGARPYSGKVGSD
DVDRVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQEGFF
NGLVNIVVKVMGDVFPELIQNEVRIREIIKEEEASFGKTLLKGIEKFKKAAQEVQGKVLS
GQDAFVLWDTYGFPLDLTQLMAEERGLWVDVEGFNNAMDEARERSRNAQNKQAGGDIIMD
ADATSALHKKGVSVTDDSYKFIWFQDHESVIKAIYTGTEFLGSTTSSNEVGIVLESTSFY
AEQGGQIFDTGSLEGTFGSFQVSNVQIFGGFVVHIGSLTRAAPRLSVGDKVICKVDYDRR
TLIAPNHTCTHMLNFALREVLGNHVDQKGSIVLPEKLRFDFSHGKPVDPALLRKIESIVN
EQIKAELEVSAKEATLSEAKRINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWSS
ISAELCGGTHISNTKEAKAFALLSEEGIAKGVRRITAVTTDGAFKAMELASLLEQEADEI
SKTEGSLLEKKVASLKSRVDSAPIPAAKKFDIRTKISALQDEVRKAQKKISEENMQKAVK
IATEMAEVAASEGKQFCISRVDVGLDAAAVREAVSKVLQKKGLSAMVFSIDETTNKVVVC
AGVAEKGDKSKQLEVSEWLTAALKPLNGRCGKGKGGLATGQGTEGVHLDAAMNLAAEFAQ
MKLR
NT seq 3075 nt   +upstreamnt  +downstreamnt
atgaagagaataacatcgacagcagcagcagcagcatcttcatctctgtctgtcactctc
cacagaactgctcttcattctcctcatctcttggcggcgattgttgttgctgctgctagg
gtttctctccttcatccttcaagagctactcttttcgcttccttctcttcttcttcttct
tcgcctttgttatcgcacatcgcagccatgccaggggttgatccacaggagatggagtgg
cctgcgaagaaagtgagagacactttcatcagcttctttgaagacaaaaaacatgttcac
tggaaatctagtcctgttgttcctgtcaacgaccctactcttctcttcgctaatgctggt
atgaaccagttcaagcctatttttcttgggactgctgatcccaataccgccttgagtaag
ctaagtcgtgcatgcaacacccagaagtgcattcgtgcaggtgggaaacataatgatctt
gatgatgtggggaaggacacctaccaccataccttctttgagatgttgggaaattggtca
tttggagattatttcaagagagaagcgattggatgggcctgggagcttctaactaagatc
tataaattgcctgctgatcgaatttatgcaacctattttggtggtgatgaaaaagctggt
cttgctcctgatgctgaagcaagagatttctggctccaatttttgccacctgagcgggtg
ctgccatttggttgtaaagataatttttgggagatgggtgatactggtccatgtggccct
tgcactgaaatacattatgatagagttggtaatcgtgatgcatctcaactagtcaataat
gatgatcctacatgcatcgagatatggaatcttgtttttattcagttcaatagggaaagt
gatggctccttgaaacctctgcctgctaagcatgttgatactggaatgggttttgagaga
ttgacttctgtacttcagaataagatgagcaattatgatactgatgtgttcttacccatc
tttgatgccatccagcaggcaacgggggctcgaccttattctggaaaagttggatctgat
gatgtagacagagttgacatggcctacagggttgttgctgatcacattagaacactctca
tttgccattgctgatggttcttgtccaggcaatgagggtcgtgaatatgttctcaggcgg
attcttcgccgagctgttcggtatggaagtgaggtcctgaaagctcaagaaggatttttc
aatggacttgtaaatattgttgtcaaagtgatgggtgacgttttccctgagctaatacaa
aatgaagtacgcattagggaaataatcaaagaagaggaagcaagttttggcaagactttg
cttaagggaattgagaaatttaagaaggctgctcaggaggttcaggggaaggtgttgagt
ggacaggatgcatttgtattatgggacacatatggtttcccgttagatttgactcagttg
atggcagaagaaagaggattatgggttgatgttgagggttttaacaacgccatggacgag
gcaagggaacggtcaaggaatgcccaaaataagcaagctggtggtgatatcatcatggat
gctgatgctacatctgctttgcacaagaagggtgtttctgttacagatgattcctataaa
ttcatatggttccaggaccatgaaagtgtaataaaagctatctacactggtactgagttc
ttgggaagtactacctctagcaatgaagttggtatagttttggagtctacaagcttttat
gctgagcaaggtggtcagatttttgatacgggatcacttgaagggacttttgggtcattt
caagtctccaatgtgcaaatttttggaggttttgttgttcatattggttctcttactcga
gcggctcccagactttctgtgggggataaagtaatttgtaaggttgattatgataggcga
acgctcattgcccccaatcatacttgtacgcatatgttgaatttcgccctcagggaagta
cttggcaatcatgtcgatcagaagggatcgattgttcttcctgaaaaactgagatttgat
ttttctcatggaaagcctgtggatcctgcgcttttaaggaaaatcgagtcaattgtaaat
gagcaaatcaaagctgaattagaagtatctgcaaaggaagcaaccctttctgaagcgaag
cgtatcaacggtttacgagctgttttcggagaagtctatcctgatcctgttagagttgtg
gcaattggtcgaaaagttgaggacctcctagctgatccagaaaataaagaatggtcatca
atctcagcagaactctgtggagggacgcacatttcaaatacaaaggaagcaaaggcattt
gctcttttatcagaggagggaattgcaaaaggagtacgaaggataactgctgttacaact
gacggtgcttttaaggccatggaactagcatccttacttgagcaggaagctgatgagata
tccaagacagaaggaagcttgctggaaaagaaagtagcttctttaaaaagccgtgtggac
tcggcacctattccagcagccaagaaatttgacattagaactaagatctctgcacttcag
gatgaagtaagaaaggcacaaaagaagatttctgaagaaaatatgcagaaggctgtcaag
atagcaacagagatggccgaagtagctgcttcagaagggaagcagttctgcatatctcgt
gttgatgttggtttagatgcagctgcagtccgtgaggcagtttccaaagtcctacagaag
aaggggctttctgctatggtttttagtatagatgaaactacaaacaaggttgtggtgtgt
gcgggagtggcagaaaagggagacaagagcaaacagctggaggtgtctgagtggttaact
gcggcattgaaacctttgaatggaagatgtgggaaaggaaagggcggtcttgccacagga
cagggaacagaaggagtacatttggacgcggccatgaatttggcagcagaatttgcacag
atgaagctgagatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (46)   

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