KEGG   Ricinus communis (castor bean): 8289032
Entry
8289032           CDS       T01087                                 
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 16 isoform X1
  KO
K05391  cyclic nucleotide gated channel, plant
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu04626  Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04626 Plant-pathogen interaction
    8289032
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rcu04040]
    8289032
Ion channels [BR:rcu04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (CNG)
   8289032
SSDB
Motif
Pfam: Ion_trans cNMP_binding
Other DBs
NCBI-GeneID: 8289032
NCBI-ProteinID: XP_002511425
UniProt: B9RB50
Position
4:26455287..26458510
AA seq 680 aa
MYNLHSYTSARFRHFPTRFSLRKKVSWWNQILDPGSDFVNKWNHIFLVTCMIALFLDPLY
FYLPIIGGDACMDIDITLGIWVTFARTVTDLFFFMHVVIKFRTAFVAPSSRVFGRGELVM
DPKAIAVRYLKSQFAVDLFAALPLPQTIIWFVIPAVKAPTANHANHTVSLIVLIQYIPRF
FVMLPLNRRIVKSTGVVSRTAWSGAAYNLLLYVLASHILGASWYLASIQRQYECWGRQCN
RERNHTHSPSCSHVFLDCTTKDNPARDAWFRNTRLLINCDAKNDENFQFGMFADAFTNHV
AESHFINKYFYCLWWGLRNLSSYGQNLMTSTFEGELLFSIGICIMGLILFAHLIGNMQTY
MQSTTARLEEWRIRRKDTEEWMRHRQLPPELQERVRRFVQYKWLATRGVDEESILKALPL
DLRRRIQRHLCLALVRRVPFFAQMDDQLLDAICERLVSSLNTRDTYIVREGDPVNEMLFI
IRGNLESSTTNGGRSGFFNSITLRAGDFCGEELLTWALMPTSRLNLPSSTRTVKALTEVE
AFALRAEDLKFVAKQFKRLHSKKLQHAFRYYSHQWRTWGACYIQTAWRRHTRRKLQMELA
RQESLFADQVLNDQGEYSGDGSVENANSAQHLGVTILASKFAANTRRGMLTPKHHDVSTL
KMPKFFKPEEPDFSEEHDDL
NT seq 2043 nt   +upstreamnt  +downstreamnt
atgtacaacctccattcttacacctctgcaaggtttcgccattttccgacaagattttca
cttagaaaaaaagtgtcatggtggaatcaaatcctagacccaggaagcgactttgtcaac
aaatggaaccacatttttctcgtcacttgtatgatcgccttgtttcttgaccctctctat
ttttatcttccaataataggaggtgatgcttgcatggacattgacattacccttggcatc
tgggtcaccttcgctcgaaccgtcactgacttgttctttttcatgcacgtcgttattaag
ttcaggactgcttttgttgcacctagttctcgtgttttcggtagaggcgagcttgtcatg
gaccctaaagctattgctgttcgatacttgaaatctcagtttgctgttgatcttttcgct
gctctccctctccctcagactataatttggtttgtaattccagcagtgaaagctccaaca
gctaaccatgcaaatcatacagtgtctctaatagtactcatccaatacattcctcgattt
ttcgttatgcttcctctgaatcgccggatagttaaatccactggagtggtttccaggacc
gcttggtcaggggcagcatataatctccttctctacgtacttgctagccatattttggga
gcatcatggtatcttgcgtccattcagagacagtacgagtgctggggaagacaatgtaat
cgtgaaagaaaccatacacattctccatcttgtagccatgtgtttctggattgtactacc
aaggataaccctgcacgcgatgcttggtttagaaacactcgtctgcttattaattgtgat
gccaaaaatgatgaaaattttcagtttggaatgttcgccgatgcctttactaatcatgtt
gctgaatcacattttattaacaaatatttctactgtctttggtggggtttacgaaactta
agttcctatggacaaaacttgatgacaagtacttttgaaggtgaattactatttagcatt
ggtatttgcatcatgggtctaattctgtttgcacatctcattggcaacatgcagacatat
atgcaatccacgacggctagattagaagaatggaggattcgacgaaaagatacagaggag
tggatgaggcatcgtcaattacctccagaactgcaagaacgtgttcgtcgtttcgttcag
tacaaatggctggcaacaagaggtgtggatgaagaatctatcctgaaagctttaccttta
gacctgcgacgacgaattcaaaggcatctttgtttagctcttgttagacgggtccctttc
tttgcacaaatggatgatcaattacttgatgcaatatgcgaacgtctggtttcatcattg
aacactagagacacatacattgtgagggaaggagatccagtgaatgagatgcttttcatc
atcagaggaaatctagagagctctacaacaaatggtggaaggtcaggttttttcaactct
attacgctgagagcaggtgatttctgcggcgaagaattattgacatgggcattgatgccg
acctctcgcttaaaccttccttcatcaactagaacagtgaaggcactgactgaagtagag
gcctttgctctcagagctgaagaccttaagtttgttgctaaacagttcaagcgtttacac
agcaagaagctgcaacatgctttcaggtattattcccatcaatggagaacttggggagct
tgctatatacaaacagcctggaggcggcatacaaggaggaaactgcaaatggaattggca
aggcaagagagcctatttgctgatcaggtcctgaatgatcaaggtgaatacagtggagat
ggatcggtggagaatgctaacagcgcacaacaccttggcgttacaatacttgcctccaaa
tttgcagcaaatacaagaagagggatgcttaccccgaagcatcatgatgtttccacctta
aaaatgcccaagttctttaaaccagaagagcctgatttctctgaagaacatgatgatcta
tag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (32)   

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