KEGG   Rhizorhabdus dicambivorans: CMV14_06410
Entry
CMV14_06410       CDS       T05084                                 
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
rdi  Rhizorhabdus dicambivorans
Brite
KEGG Orthology (KO) [BR:rdi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rdi03016]
    CMV14_06410
Enzymes [BR:rdi01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     CMV14_06410
Transfer RNA biogenesis [BR:rdi03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    CMV14_06410
 Prokaryotic type
    CMV14_06410
SSDB
Motif
Pfam: PseudoU_synth_1 DUF3775
Other DBs
NCBI-ProteinID: ATE64068
UniProt: A0A2A4FW39
Position
complement(1350963..1351718)
AA seq 251 aa
MTRFRFTVEFDGRPFMGWQRQAHGPSVQQAIEEAITAVTGETAVLHAAGRTDAGVHGRAM
AAHADVAKDITPFRLGEALNARLRPAPVAILACEAVADDWHARFSCIGRRYIYRIVNRRA
PLTMDAGLAWQVAAELDADVMHAAAQRLVGRHDFTTFRSAHCQSESPVKTLDRLDVRRTG
DVIEIEAAARSFLHHQVRSMVGCLMMVGRGSWSADDLGDALAAADRSRLGLNAPPDGLYF
MEAVYPESAAR
NT seq 756 nt   +upstreamnt  +downstreamnt
atgacccgcttccgcttcacggtcgagttcgatggccgccccttcatgggatggcagcgc
caggcgcacgggccgagcgtccagcaggcaatcgaggaggccatcaccgccgtcaccggc
gagaccgccgtgctgcatgccgccgggcgaaccgatgcaggggtccacggccgcgcgatg
gcggcacacgccgatgtcgcgaaggacatcacgcccttccggctgggcgaggcgctcaac
gcccggctgcgtccggccccggtcgcgatcctcgcctgcgaagccgtggccgacgactgg
catgcgcgcttctcctgcatcggccggcgctacatctaccgcatcgtcaaccgccgcgcc
ccgctgacgatggacgccgggctcgcctggcaggtcgcggccgaactggacgcggacgtg
atgcacgctgctgcccagcggctcgtcggccggcacgacttcaccaccttccgctcggcg
cattgccagtccgagagcccggtcaagacgctcgaccggctcgacgtgcgccgcacgggc
gatgtgatcgagatcgaggcggcggcgcgctccttcctccaccaccaagtccgctcgatg
gtcggctgcctgatgatggtcgggcgcggcagctggagcgccgacgacctcggcgatgcg
ctggccgccgccgaccgcagccgattgggcctcaatgcgccgcccgatgggctctatttc
atggaagccgtctacccggaaagtgccgcccgatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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