KEGG T01343: HMPREF0733

Rothia dentocariosa: HMPREF0733_10570

Entry

HMPREF0733_10570  CDS       T01343

Symbol

rumB

Name

(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumB

K03212

23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]

Organism

rdn Rothia dentocariosa

Brite

KEGG Orthology (KO) [BR:rdn00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rdn03009]
    HMPREF0733_10570 (rumB)
Enzymes [BR:rdn01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.189  23S rRNA (uracil747-C5)-methyltransferase
     HMPREF0733_10570 (rumB)
Ribosome biogenesis [BR:rdn03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    HMPREF0733_10570 (rumB)

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_31 Methyltransf_25 MTS Methyltransf_11 Ubie_methyltran CMAS Methyltransf_12 Methyltransf_32 Methyltransf_15 Methyltransf_4 PCMT Cons_hypoth95 Phage_min_cap2

Other DBs

NCBI-ProteinID:

ADP40028

UniProt:

E3H125

Position

complement(624200..625330)

AA seq 376 aa
MECAYYRESLCRSCTSIETPYPAQIAAKQADARRLLAAYPHLTWLEPVASDEAHFRNKAK
LVVGGSAQNPSLGIVDYRSGRATDLSECPLYIEPIERAIPVLHELIQRADLTPYDIPARR
GELKNILVTASDTGELMVRFVLRSKKLLVPIRRQLGWLQERLPKLAVLSVNLLREHVALI
EGDEEIILTDRQTLPMRVNGMSLHLRPQSFFQTNTQIAQAMYAQGREWVAQVQPRTLWDL
YCGVGGFALHAAQVMHGEVTGIEISAEAIRSAQRTVAEQGLEGVKFAAGDATEFAVNARE
TPEMLVVNPPRRGIGERLCAWVEGSEIEHVIYSSCNAKTLASDLARMPSYKPVAARVLDM
FPHTNHYEVMTLLRRG

NT seq 1131 nt +upstreamnt +downstreamnt
atggaatgcgcctattatcgtgagagtctttgccgctcctgcaccagcatcgaaaccccg
tatcccgcccagatcgcggcgaaacaggccgatgcgcgcaggcttctcgcggcgtaccct
cacctgacctggttggaacctgtcgccagtgacgaggcgcattttcggaataaagcgaag
ctggtggtgggcggttcggcgcagaacccatccctgggcatcgtagattatcgttcgggg
cgcgccaccgatttaagcgaatgcccgctctatattgagccgattgagcgcgctatcccg
gtgctgcacgagctcattcagcgtgccgatttgaccccgtatgacattccggcccggcgt
ggtgagctcaagaatattctggtgaccgcatccgatacgggcgagctaatggtgcggttt
gtgctccgctcgaagaagctgctggtgcctattcgccgtcagctggggtggctgcaggag
cgtctgccgaagttggcggtgctgtcggtgaacctgctgcgcgagcatgtggcgctgatt
gagggcgatgaagagatcattctgaccgatcggcaaaccctgccgatgcgcgtgaacggc
atgagtctgcacctgcgcccgcagagtttctttcagacgaacacgcagattgcgcaggcg
atgtacgcgcagggccgcgagtgggtggcgcaggtgcagccgcgcacgctctgggatttg
tattgcggcgtgggcggttttgccctgcacgcggcgcaggtgatgcacggtgaggtcacc
gggattgagatcagtgcggaggcgattcgcagcgcccagcgtaccgtcgccgagcagggg
cttgagggcgtgaaatttgcggcgggggatgcgaccgagtttgccgtgaacgcccgtgaa
acccccgagatgctggtggtgaacccgcccaggcgaggtattggtgagaggctgtgcgcc
tgggttgagggctccgagattgagcacgtaatttattcgagctgcaacgcaaaaaccctt
gcctctgacctggcgcgcatgccttcctacaagccggtcgccgcgcgcgtgctcgatatg
ttcccgcatacgaaccactatgaggttatgacgttgctgaggcgggggtag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (23)   

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