KEGG   Rhodococcus erythropolis BG43: XU06_10865
Entry
XU06_10865        CDS       T03842                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
reb  Rhodococcus erythropolis BG43
Pathway
reb03420  Nucleotide excision repair
reb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:reb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    XU06_10865
   03430 Mismatch repair
    XU06_10865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:reb03400]
    XU06_10865
Enzymes [BR:reb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     XU06_10865
DNA repair and recombination proteins [BR:reb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XU06_10865
   MMR (mismatch excision repair)
    Other MMR factors
     XU06_10865
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 HRDC UvrD_C_2 AAA_30 C1_1
Other DBs
NCBI-ProteinID: AKD97191
Position
2359314..2361452
AA seq 712 aa
MMVPMPADTGLDPEQSAAVLAPRGPVCVLAGAGTGKTRTITRRIAHLVADGHVSAGQVLA
VTFTARAAGEMRGRLRELGVGGSGPQVQARTFHAAALRQLKYFWPQVIGDTPWRLLDRKF
AVVSSAAARVGLSTSTESVRDLASEIEWSKASLIAPEDYPRAIAKIHREAPVDATKVAQV
YAAYEELKARGQDGMLLDFDDLLLHTAAALEEHSTVADEFRERYRCFVVDEYQDVTPLQQ
RVLDAWLGDRDDLTVVGDANQTIYSFTGATPNYLLDFSRKFPEATVVRLERDYRSTPEVV
SLANRVIGAARGRIAGTRLQLIGQRAPGPEPEFMEFDDEPAEALGVARAIKRLIAAGTPA
AEIAVLYRINAQSEAHEQALTKLGIPFQVRGGEGFFTRTEVRQAVAALRQAAGRDDLPEG
ADNGEALVSLVRAVLAPLGLTNEEPSGTQARERWASLSALVALTEEQLVHEPELSLTGLL
QELTARAEARHPPTVQGVTLASLHAAKGLEWDAVFLVGLNDGTLPIQHVLGDANSGADDV
AVEEERRLLYVGVTRAREHLQLSWALARNEGGRKSRRRSRFLNGLIPEDSPASRVAAPSS
GNKKRPRCRVCGKPLIGTSATMLGRCEKCPSNVDLELLEHLKAWRLDKSRELKVPAYVVF
SDNTLMAIAEQRPQDNRGLVSIPGIGPKKLDNFGEDVLAVIRGELRAATLDI
NT seq 2139 nt   +upstreamnt  +downstreamnt
atgatggtccccatgcctgcggacaccggactggatccagaacaatcggccgccgtgctc
gcgccacgcggcccggtatgtgtcctcgcgggcgctggaacaggcaaaacccgcaccatt
acccgccggatcgcgcatctggttgccgacggtcatgtctccgccggccaggtgcttgcc
gtgacattcacagcgcgagcggccggcgaaatgcgtggacggcttcgtgagctgggggtt
ggtggaagtgggccgcaggtacaggctcgcaccttccacgccgccgctcttcgtcaactc
aagtacttctggccgcaggtgatcggtgacacgccgtggcgtctgctcgatcggaagttc
gcggttgtcagcagtgccgccgctcgtgtcgggttgtccaccagtacggaaagcgtgcgc
gacctcgccagcgaaatcgagtggtccaaggcctcactgatcgctcccgaggactaccca
cgcgcgatagccaagattcatcgcgaggcgccggtcgatgccaccaaggttgcgcaggtc
tacgcggcatacgaagagctgaaggcacgtggccaggacggcatgctcctcgatttcgac
gatctcctacttcacaccgcggctgcgctcgaagagcattcgacggttgccgacgagttc
cgcgaacggtaccgctgcttcgtggtcgacgagtatcaggacgtcaccccgctgcaacag
cgtgtgctcgacgcctggctcggcgaccgcgacgacctgaccgtggtgggcgatgcgaat
cagaccatctactccttcaccggcgccaccccgaactatctgttggacttctcgcggaaa
ttccccgaagcgaccgtcgtccggctcgaacgggactaccgctccacccctgaggtcgtg
tcgctggcgaaccgcgtgatcggtgcagcgcgcggacggatcgccgggacgcgtcttcaa
ttgatcgggcaacgcgctccggggcctgagccggagttcatggagttcgacgacgagcct
gccgaagcgctcggcgttgcgcgggcgatcaaacggctgatcgcggcaggcactccagcg
gccgagatcgctgttctgtatcggatcaatgctcagtcggaggcgcacgagcaggcactc
accaagctcggcattccgttccaggtgcgtggtggagagggcttcttcacccgcaccgag
gtccgtcaggcagtggcggcactgcgtcaggccgccggacgagacgacctccccgaaggc
gcagacaacggcgaagcgctggtttcactggttcgcgctgtactcgcgccactcggtctg
accaatgaagaaccttcgggcacgcaagcccgcgagcgctgggcgtcgctctcggctctc
gtggcgctgaccgaagaacagctcgtccacgaacccgaactgtcgctcaccgggcttcta
caagagctcacagcccgagccgaggcgcggcacccaccgaccgtgcagggcgtgacgctg
gcttcgcttcacgcggccaaggggctcgaatgggatgcggtgttcctggtcggcctcaac
gacggcaccctgccgatccaacacgttctcggcgacgccaattcgggcgccgacgacgtc
gcggtggaggaggagcgtcggcttctgtacgtgggggttacccgcgcccgcgagcatctg
cagctgtcttgggcattggctcgcaatgagggtggacgcaagtcccgtcgccggtcgagg
ttcctcaacgggctcatccccgaggactcaccggcttcgcgcgttgccgcgccgtcgtcg
gggaacaagaagcgtccgcgctgccgcgtctgcggcaaaccgttgatcgggacgtcggcg
acaatgctcgggcgctgcgaaaaatgcccgtccaatgtcgacctggaattgctcgagcac
ctcaaggcctggcgtctggacaagtcccgagaactcaaagttccggcctatgtcgtcttc
agtgacaacacactgatggctattgccgaacaacgaccacaagacaatcgtggactggtt
tcgatccctggaatcgggccgaagaaactcgacaacttcggagaagacgtactagctgtc
attcgcggcgaactgcgtgcggcaacactcgatatctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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