LOCUS NC_010373 57951 bp DNA circular CON 23-DEC-2023
DEFINITION Methylobacterium sp. 4-46 plasmid pM44601, complete sequence.
ACCESSION NC_010373 NZ_ABAY01000000 NZ_ABAY01000001-NZ_ABAY01000565
VERSION NC_010373.1
DBLINK BioProject: PRJNA224116
BioSample: SAMN00623053
Assembly: GCF_000019365.1
KEYWORDS RefSeq.
SOURCE Methylobacterium sp. 4-46
ORGANISM Methylobacterium sp. 4-46
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Methylobacteriaceae; Methylobacterium.
REFERENCE 1 (bases 1 to 57951)
AUTHORS Marx,C.J., Bringel,F., Chistoserdova,L., Moulin,L., Farhan Ul
Haque,M., Fleischman,D.E., Gruffaz,C., Jourand,P., Knief,C.,
Lee,M.C., Muller,E.E., Nadalig,T., Peyraud,R., Roselli,S., Russ,L.,
Goodwin,L.A., Ivanova,N., Kyrpides,N., Lajus,A., Land,M.L.,
Medigue,C., Mikhailova,N., Nolan,M., Woyke,T., Stolyar,S.,
Vorholt,J.A. and Vuilleumier,S.
TITLE Complete genome sequences of six strains of the genus
Methylobacterium
JOURNAL J Bacteriol 194 (17), 4746-4748 (2012)
PUBMED 22887658
REFERENCE 2 (bases 1 to 57951)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Chertkov,O., Brettin,T.,
Detter,J.C., Han,C., Kuske,C.R., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N., Marx,C.J. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of plasmid1 of Methylobacterium sp. 4-46
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 57951)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Chertkov,O., Brettin,T.,
Detter,J.C., Han,C., Kuske,C.R., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N., Marx,C.J. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (12-FEB-2008) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT REFSEQ INFORMATION: The reference sequence is identical to
CP000944.1.
URL -- http://www.jgi.doe.gov
JGI Project ID: 4003784
Source DNA and bacteria available from Christopher J. Marx
(cmarx@oeb.harvard.edu)
Contacts: Christopher J. Marx (cmarx@oeb.harvard.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LANL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Date :: 12/22/2023 23:13:34
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 6.6
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA
Genes (total) :: 7,123
CDSs (total) :: 7,038
Genes (coding) :: 6,787
CDSs (with protein) :: 6,787
Genes (RNA) :: 85
rRNAs :: 6, 6, 6 (5S, 16S, 23S)
complete rRNAs :: 6, 6, 6 (5S, 16S, 23S)
tRNAs :: 63
ncRNAs :: 4
Pseudo Genes (total) :: 251
CDSs (without protein) :: 251
Pseudo Genes (ambiguous residues) :: 0 of 251
Pseudo Genes (frameshifted) :: 97 of 251
Pseudo Genes (incomplete) :: 200 of 251
Pseudo Genes (internal stop) :: 27 of 251
Pseudo Genes (multiple problems) :: 71 of 251
CRISPR Arrays :: 3
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..57951
/organism="Methylobacterium sp. 4-46"
/mol_type="genomic DNA"
/strain="Apr-46"
/db_xref="taxon:426117"
/plasmid="pM44601"
gene 5..520
/locus_tag="M446_RS33725"
/old_locus_tag="M446_6965"
CDS 5..520
/locus_tag="M446_RS33725"
/old_locus_tag="M446_6965"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012290018.1"
/translation="MLPPTSPTASTRHDFHLDIDIAPPRVNPCPFDRLRNRGELDMDR
VRNNALYAAGSRLREHAQHAALDGLARARLDGTPGSGPGSRCPITETVERHRHTLLLA
KQSMQSHEWQIVIAVVIDEATLEQAGRSAGYGNKAGATAVALDRLRHGLAALVMAWRL
LPPGEHPLSVA"
gene 734..961
/locus_tag="M446_RS36320"
/old_locus_tag="M446_6966"
CDS 734..961
/locus_tag="M446_RS36320"
/old_locus_tag="M446_6966"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012290019.1"
/translation="MSPQDDRLDLLTGFQTIGDYLGWSYRKTQYRSSIGDLPTFKVGQ
HVCARRSTLRDWAMKMEAKASREGKLADVAP"
gene 1343..1735
/locus_tag="M446_RS38475"
/old_locus_tag="M446_6967"
CDS 1343..1735
/locus_tag="M446_RS38475"
/old_locus_tag="M446_6967"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012290020.1"
/translation="MPRKPASNAVAKSAVSNGTSLFLVDEVDRRSAPARRFRDIVGDV
TSDLGGRDEVTAVQQQLIRRFATLALTLELQEAAIVEGGQVDLDLYGRLSGQMNRLAS
TLGLKRVMRDANELDLKAYMARKAGVLS"
gene 1732..3132
/locus_tag="M446_RS33740"
/old_locus_tag="M446_6968"
CDS 1732..3132
/locus_tag="M446_RS33740"
/old_locus_tag="M446_6968"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_020092299.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012290021.1"
/translation="MTIIDALTDPHLFGSAIRDPATFTAWRVFLKAFFGLSMNEAELE
IFRACTGREVPPTTPMAEAHLPTGRRAGKSFVLALIAVYLAAFREYRGYLAPGERATV
MVLAADRRQARVIFRYCKGLLAGSPLLANLIERETAEALDLANGVTIEIGTASVKTTR
GYSLAAVLCDEIAFWETSEDSASPDYEILNALRPGMATIPGSVLLCASSPYARKGALW
DAFSRHFGQDNSDVLVWRAATRVMNPTVPERTIDEAYQRDPAAAAAEYGAEFRSDIES
FVSLDVVKACIDSGVMERLRHAGRHVAFVDPSGGSADSMTLAIAHHQAGKAVLDAVRE
IRPPFSPEQVVEEFAGLMKSYGIREVTGDRYAGEWPRERFRVHGINYKVSEKSKSDLY
RDLLPLLNSAKVSLLDHPRLVQQLVALERRTARGGRDSIDHPRGGHDDLANAVAGVLV
GLARPQNTFQVLPFPF"
gene 3165..3509
/locus_tag="M446_RS36330"
/old_locus_tag="M446_6969"
CDS 3165..3509
/locus_tag="M446_RS36330"
/old_locus_tag="M446_6969"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012290022.1"
/translation="MAYPTKTLPLDDSGNVSGAATAITTLRAAAGTRYANAVTALHAA
FVDLQALDVLTNNTNVGGNGMAVNTFTGGEAEWRLPLMLRHPVYIPNIPGNPNWAAES
RARLDIYFSNLS"
gene 3518..4213
/locus_tag="M446_RS33745"
/old_locus_tag="M446_6970"
CDS 3518..4213
/locus_tag="M446_RS33745"
/old_locus_tag="M446_6970"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012290023.1"
/translation="MSNKGNIAEFWQQAVRQQLDQCPALRSDSQTGSPVVAALRSATS
RAAEISAAFGRIGERTRRDPHLTEAGKRDKITTVATRDTLGPLRRTQREVAEVKAQVA
AKRAACVVRRGTDPVEEMRRQEVRAFLRSLPDPGKRIGAAMQDPEIARAVVEASPMLS
GMDAANYQRIHDEVVKAEHGDVLAELDGLKEVIQYAENIMAFCHNSVRDTLGENRETD
KLIADFNKEYDAS"
gene 4359..4586
/locus_tag="M446_RS33750"
/old_locus_tag="M446_6971"
CDS 4359..4586
/locus_tag="M446_RS33750"
/old_locus_tag="M446_6971"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_043703218.1"
/translation="MTDTDRANMGALFREVATKLGGYVPGRGMVFSDCVARALGYYDA
TLLRAHMRDPNNVEWRRRLIDAVAMLKAARP"
gene complement(4678..5796)
/locus_tag="M446_RS33755"
/old_locus_tag="M446_6972"
CDS complement(4678..5796)
/locus_tag="M446_RS33755"
/old_locus_tag="M446_6972"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015928929.1"
/GO_function="GO:0003700 - DNA-binding transcription
factor activity [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="WP_012290025.1"
/translation="MDSDASSGDGQGYDLGLNIGLSKCKGQITPLRVIPSGHVPIDFV
HVHAVQAICDILVELKIEPEKILKLAGIDTQIFGTIEAISFASLGRLTALAADQTQCA
HFGLLIGQRVTLASLGLLGTRMRHSETVGDALQAVRTHHDLLNRGAVIELSIDGPVAI
VSYAPYEPDIEGVALHCERAIAALTSVLRSLCSPHWSPEEVLLPRLEPEDTTPYTRFF
RAPVRFSQEIAALVFPARVLRRPVEGANPLIRAAVERRIQQLEAVIPSGLTDEVRRRV
RSTVSEKRIERLHVAQSLAIHQRTLARRLKAEGTTFRSVANQTRLAMAKQLLANTNLS
LARISAALEFSEPPAFTRAFHRWTGMAPSAWRKDHRGS"
gene complement(6032..6292)
/locus_tag="M446_RS33760"
/old_locus_tag="M446_6973"
CDS complement(6032..6292)
/locus_tag="M446_RS33760"
/old_locus_tag="M446_6973"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018260551.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012290026.1"
/translation="MADTLTIGDLYKLKLVTDEQLDAAVMDFLSDPKPGPRPLAEDIA
IDVCAIMAASSHAREVLAARGSSEAEMRMAVRTAILLARPAR"
gene 7002..7202
/locus_tag="M446_RS33765"
/old_locus_tag="M446_6975"
CDS 7002..7202
/locus_tag="M446_RS33765"
/old_locus_tag="M446_6975"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012333737.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012290028.1"
/translation="MADDFNIRDALEALLREAGQIFDVCDRDDSWAPTASFVVEIQAH
ACCEALNGLEGRERYKVTKRAA"
gene complement(7498..7806)
/locus_tag="M446_RS36340"
/old_locus_tag="M446_6976"
CDS complement(7498..7806)
/locus_tag="M446_RS36340"
/old_locus_tag="M446_6976"
/inference="COORDINATES: protein motif:HMM:NF012442.3"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0030261 - chromosome condensation
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="HU family DNA-binding protein"
/protein_id="WP_012290029.1"
/translation="MLRSQFTRRIAELNPHLRSGQANAVVRAVLDRIAEGLADGSRVE
LRGFGAFKTVTRDARPSRNPRTGELVTVPAKRDVKFKASVEVTKRLNPTDNRLLRVAE
"
gene 8098..8304
/locus_tag="M446_RS33775"
/old_locus_tag="M446_6977"
CDS 8098..8304
/locus_tag="M446_RS33775"
/old_locus_tag="M446_6977"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012331750.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="CsbD family protein"
/protein_id="WP_012290030.1"
/translation="MADKDRIEGSADQMKGSLKQTAGDLTGDQKLKSEGTMDKVSGKI
QNAVGGAKDAIRDTFSSDKDKKPT"
gene complement(8630..9220)
/locus_tag="M446_RS33780"
/old_locus_tag="M446_6979"
CDS complement(8630..9220)
/locus_tag="M446_RS33780"
/old_locus_tag="M446_6979"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012290032.1"
/translation="MNHDQELRDLARAYADGRITEAEYEKADAAIRARMPARRAPATV
VPLGRLRTLFPPKRRCRSPDRLKTLERRRTIAFSGPLPPATAARFTTGQLAVLGIVGD
EIAANGDCTLTVGEIAARAGVSHRLAQDAIRLAELDGLVRIEERRRRGDRNLPNRVTV
LSREWSAWLKRRRPLDAEMRALQIVRDLLGSRNAPW"
gene 9646..10185
/locus_tag="M446_RS33785"
/old_locus_tag="M446_6980"
CDS 9646..10185
/locus_tag="M446_RS33785"
/old_locus_tag="M446_6980"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012290033.1"
/translation="MAEEWFTYSALGERLGISPEAARQKAIRNHWPRRAGNDGKAQVR
VDIEEVIASTIPRKPREEEPSDACPTPEALPVEPPSDARTFAALEEHIATLKAMAAKA
EEIAERERQRADQEGVRADAERARADAERARANELVDRITQLQNDERASRATIERELS
ELRGVVDRLKRPWWRRLAG"
gene 10472..10642
/locus_tag="M446_RS38480"
/old_locus_tag="M446_6981"
CDS 10472..10642
/locus_tag="M446_RS38480"
/old_locus_tag="M446_6981"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012336508.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_168169204.1"
/translation="MQIYRRLRERGFSPVQTLAMIGVSVPLLVAGASITLLGTLDAWG
LVEPLRASIPRG"
gene 11930..12601
/locus_tag="M446_RS33795"
/old_locus_tag="M446_6984"
CDS 11930..12601
/locus_tag="M446_RS33795"
/old_locus_tag="M446_6984"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012751911.1"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ParA family protein"
/protein_id="WP_012290037.1"
/translation="MKTLAIISQKGGVGKTTLATALAVEAGRAGKSTVVFDLDPQASA
SFWKDTRKDELVAMTAIPAARLGHVIKAADAAGCDFAIVDTPPFSKDIAYEAAQHADF
VLIPTRPAVLDVMATNKTIELLRHYGKPSAVILTFCPPIGREVDDSVEAVNALGARIC
PVRIGNRIAFSRAQQTGQVAQEIEPEGKAAQEIQRLYSYVCMHLNNSERSTADGRKRV
SSHTG"
gene 12567..12917
/locus_tag="M446_RS33800"
/old_locus_tag="M446_6985"
CDS 12567..12917
/locus_tag="M446_RS33800"
/old_locus_tag="M446_6985"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018263993.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ribbon-helix-helix domain-containing protein"
/protein_id="WP_012290038.1"
/translation="MAGNAFQAILDKAAREPAPEPERKPAARRAPKPANRSAEPAPAP
APEAKKFHRPSRDNRRFVGGHFEPAVGKQLRMIAVEDDTTVQALLEEALDLLFVKKGR
QKIADLAPRTDIGM"
gene 12946..14091
/locus_tag="M446_RS33805"
/old_locus_tag="M446_6986"
CDS 12946..14091
/locus_tag="M446_RS33805"
/old_locus_tag="M446_6986"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_017980698.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="replication initiator protein A"
/protein_id="WP_012290039.1"
/translation="MTRRQYIDRQFDLFLPYISDLPLRDQRETMERPFFSLSKNKRLK
PIEYTSPDGKVFVSVYPNEKFGMATIWDADVLIWAASTLSRLKKAGINDIPRTLHCQP
YDILKTIGRATGGQEYRLLREALGRLQSTTIITNIRAERTKTKKRQFSWIESFTDLVD
EETQQSRGMSITLADWFYEGVVMDGGILSIDPAYFTISGGRERWLYRVARKHAGGANA
EGFAIPLRTLFEKSGAEGEYRRFKFELQAIVRRNNVPEFVFRLEEDERGGEPLLRMVR
RDLIGDIADMPKAPRRRKAKTPATSPAPSVSKGHVAASLPLFQAITDETIASVRRDFP
GWDVYALKGDFDAWIAENPSKLPDDYNAAFYGFVKRYHARNRHQLRG"
gene 15019..>15225
/locus_tag="M446_RS39545"
/old_locus_tag="M446_6987"
/pseudo
CDS 15019..>15225
/locus_tag="M446_RS39545"
/old_locus_tag="M446_6987"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003606573.1"
/note="incomplete; partial in the middle of a contig;
missing C-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
gene complement(<15227..15496)
/locus_tag="M446_RS33810"
/old_locus_tag="M446_6988"
/pseudo
CDS complement(<15227..15496)
/locus_tag="M446_RS33810"
/old_locus_tag="M446_6988"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_076611126.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/GO_process="GO:0006313 - DNA transposition [Evidence
IEA]"
/note="incomplete; partial in the middle of a contig;
missing C-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="transposase"
gene complement(15465..15980)
/locus_tag="M446_RS33815"
CDS complement(15465..15980)
/locus_tag="M446_RS33815"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018261817.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_265576688.1"
/translation="MGGVGSGQWGGRPTVESGLTLTLGKLLRDGICRPGQSRAGTLTW
TNTRTGAQLASIAYEAHLGAEHGRLRLHFTTTRSNSEKRHSDDWIELTTTTQPFGGRR
WWFICPRTGARVAKLYLPGGALTFASRQAHRLGYRSQRETPIGLASGKWRALSVREEV
PDARTEEALHP"
gene complement(16106..>16331)
/locus_tag="M446_RS39390"
/pseudo
CDS complement(16106..>16331)
/locus_tag="M446_RS39390"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012333144.1"
/note="frameshifted; incomplete; partial in the middle of
a contig; missing N-terminus; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="MucR family transcriptional regulator"
gene complement(16418..17533)
/locus_tag="M446_RS33820"
/old_locus_tag="M446_6990"
CDS complement(16418..17533)
/locus_tag="M446_RS33820"
/old_locus_tag="M446_6990"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018261507.1"
/GO_function="GO:0016491 - oxidoreductase activity
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="TlpA disulfide reductase family protein"
/protein_id="WP_012290042.1"
/translation="MPQTERLIGDPAAEIRVQTFLKGEPITALAQGCVHVVVFWAPWC
GSCKVAFSHLTALQVRHPQVPIIGVAVTWTDLGELAAFVRDHGDAIGYRIAADLPLSP
GERQGTMDRTWCQAAYNTDVPTAFIIDRDGRIAWIGDPLESDGPLAAVVEGRWDLAAA
REAQEAVLQRDKVRELWRLEEAVERHLAAGDRSGALQAYDAAFAADPGLEPLRGLHKF
ALLLLPARDAAALDYARHLIGAVVADQIEPLIHLGTMLAEAAEQGTGAPDWPPAAAAL
ALTAITRAEASGEVTRTDQRMQLAEAAARALLVVGRTGEAAARARAARALAPAPAPAP
APDIVRAVIIFQLDQLVARCDAAAGRRDGATCRLDEA"
gene complement(17816..18214)
/locus_tag="M446_RS38485"
/old_locus_tag="M446_6991"
CDS complement(17816..18214)
/locus_tag="M446_RS38485"
/old_locus_tag="M446_6991"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="PE family protein"
/protein_id="WP_168169203.1"
/translation="MKKLIIMTISAVGMFAISQQAFAVGQGGIGGPGGGGGNGIRGGI
GGPGGGGGDGVRGGIGGPGGGGGNGIRGGIGGPGGGGGDGVRGGIGGPGGGGGNGIRG
GIGGPGGGGGDGVRGGIGGPGGGGGRGGAP"
gene <18318..>18801
/locus_tag="M446_RS33830"
/old_locus_tag="M446_6992"
/pseudo
CDS <18318..>18801
/locus_tag="M446_RS33830"
/old_locus_tag="M446_6992"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012251879.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/GO_process="GO:0006313 - DNA transposition [Evidence
IEA]"
/note="frameshifted; incomplete; partial in the middle of
a contig; missing N-terminus and C-terminus; Derived by
automated computational analysis using gene prediction
method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="transposase"
gene 19456..19926
/locus_tag="M446_RS39395"
CDS 19456..19926
/locus_tag="M446_RS39395"
/inference="COORDINATES: protein motif:HMM:NF015365.3"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/GO_process="GO:0006313 - DNA transposition [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS1 family transposase"
/protein_id="WP_265576689.1"
/translation="MGPGEERDRRAPQRLGAERHALGQGSRPGIAPSRSRSAGRSSSR
STRSGSSSKKDAQTLDLEGPRARDRLEPWDVRLFCTDNYAPYAAALPAGRHHVGKDQT
QLVESNNARQRHWFARFRRRTCVVSKSVEMVEATMALFAFYHCNGSELTSALVG"
gene <19875..20330
/locus_tag="M446_RS39400"
/pseudo
CDS <19875..20330
/locus_tag="M446_RS39400"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_076612169.1"
/note="frameshifted; incomplete; partial in the middle of
a contig; missing N-terminus; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS3 family transposase"
gene complement(20361..20835)
/locus_tag="M446_RS36375"
/pseudo
CDS complement(20361..20835)
/locus_tag="M446_RS36375"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_076611729.1"
/note="frameshifted; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="transposase"
gene complement(<20959..>21162)
/locus_tag="M446_RS39405"
/old_locus_tag="M446_6997"
/pseudo
CDS complement(<20959..>21162)
/locus_tag="M446_RS39405"
/old_locus_tag="M446_6997"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015927380.1"
/note="internal stop; incomplete; partial in the middle of
a contig; missing N-terminus and C-terminus; Derived by
automated computational analysis using gene prediction
method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS5/IS1182 family transposase"
gene 21428..22195
/locus_tag="M446_RS33840"
/old_locus_tag="M446_6998"
CDS 21428..22195
/locus_tag="M446_RS33840"
/old_locus_tag="M446_6998"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018264066.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF3102 domain-containing protein"
/protein_id="WP_012290045.1"
/translation="MPKITRIGFNYAELESSVAKEARDTAHRLREQGNAFIIEVGLTL
LRMKGLLGHGAFGPWVRTELRWTDRTAQNYMRAAEVFAGKSEIISHLPSTTVYDLAAK
SVPNDLRNEIIREFQESGCTDKDVAAKKIRDFKLSTKKTVAPNKREKHQAGETQCCVS
HPTEGGRQKTPGAAAEAAALIVEALGDGTDHLFRLMEKASWNDIKAELMVLISKPKQP
EPQASSRVSKPKQPEPQASSRVSKPKQPEPQAPSRVH"
gene 23518..25173
/locus_tag="M446_RS33845"
/old_locus_tag="M446_7000"
CDS 23518..25173
/locus_tag="M446_RS33845"
/old_locus_tag="M446_7000"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010686214.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="outer membrane beta-barrel protein"
/protein_id="WP_050777595.1"
/translation="MMAFAPLVTPSFTWTGPYAGVFFGYGSLDESGTGRCIGPRCVRL
PALSPGARAADLSAGSEVGYNLQASPGSGLVIGAAVDYQTTRLRGYGESILVREVDEN
SDFAAFYHLGQRLDTFGAVRGKAGYAFDRLFVYGTGGLAYGYVRIDVGTALTVGDRQF
AAQGLTSGFRLGYAAGGGAEYAISPHLSVKAEGLYYDLGQRTVSIQAALPRSVYGGTI
ATHGFLARASLNYRFGDGIPGLGLPEHIRTLLNPVAYTPLPASDWVFEVGIRYFYSTG
RSSLLLGDSENAGHKNSRVIYHDVGAHASENFVRVDDNSTGRFAKAFVGSGIITSGRF
TDEDFPPRMPLYSHTISKIPGRDIGYAVADVGYNVLVGETYRLGAFAGYQYVSEFADS
SGCAQKADNSTCGWPFIPRSVEVVTHDMHWHGMRIGLAGELRYDRLKLSAEAAYLPIA
DLSGFDHHWLRPDINPLPVYGLGNGYFLQGVVSYDLTPEISIGVGARYWKMVTDRGHT
KFPYAEPSALPTPLKYESSRAGVFVQASYKFTDNSFDLGPFLR"
gene complement(25196..>25420)
/locus_tag="M446_RS33850"
/old_locus_tag="M446_7001"
/pseudo
CDS complement(25196..>25420)
/locus_tag="M446_RS33850"
/old_locus_tag="M446_7001"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012251879.1"
/note="incomplete; partial in the middle of a contig;
missing N-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS5/IS1182 family transposase"
gene complement(25624..25749)
/locus_tag="M446_RS39410"
CDS complement(25624..25749)
/locus_tag="M446_RS39410"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_265576690.1"
/translation="MSERGRKVFEAVAASHGMTDQEFFTYLIRSQVLDLLPSNDL"
gene 26260..26460
/locus_tag="M446_RS36385"
/old_locus_tag="M446_7002"
CDS 26260..26460
/locus_tag="M446_RS36385"
/old_locus_tag="M446_7002"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012290048.1"
/translation="MLAWVREWFRGNAGIGGWWTAERQQHAVDVLVKGGVSELGAKAL
VARWSGVSQTFNARKKSSPNKA"
gene 27132..27272
/locus_tag="M446_RS38500"
/old_locus_tag="M446_7003"
CDS 27132..27272
/locus_tag="M446_RS38500"
/old_locus_tag="M446_7003"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_168169206.1"
/translation="MNARSRSLIKRFLDAPLPHQMRTPEQIEAYWKELGAEIGPVTET
PR"
gene complement(27381..27800)
/locus_tag="M446_RS33855"
/old_locus_tag="M446_7004"
CDS complement(27381..27800)
/locus_tag="M446_RS33855"
/old_locus_tag="M446_7004"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008878340.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF2442 domain-containing protein"
/protein_id="WP_012290050.1"
/translation="MDEAAFEWVTARAKRVRQAGPHATSARYLTAGGRLVVGLSTGAE
LRVPVAIIEGLAGASPEDLREIEVTPAGLGLHFPRLDADVYVPALIEGVTGSGKWMAQ
HLGRAGGSARTERKAQASRENGKLGGRPRTRQRELVD"
gene complement(27793..28035)
/locus_tag="M446_RS33860"
/old_locus_tag="M446_7005"
CDS complement(27793..28035)
/locus_tag="M446_RS33860"
/old_locus_tag="M446_7005"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_004213304.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF4160 domain-containing protein"
/protein_id="WP_012290051.1"
/translation="MPTVLRIESLRVVIYPNDHRPAHVHVIGEDCEAVFNLNCPDGPV
KIRENHGFALQRAAALARELEANLTHLCEEWRKIHG"
gene complement(28095..28646)
/locus_tag="M446_RS33865"
/old_locus_tag="M446_7006"
CDS complement(28095..28646)
/locus_tag="M446_RS33865"
/old_locus_tag="M446_7006"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018698109.1"
/GO_function="GO:0000150 - DNA strand exchange activity
[Evidence IEA]"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0006310 - DNA recombination [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="recombinase family protein"
/protein_id="WP_012290052.1"
/translation="MARIGYARVSSTDQDLALQLAGLKAAGCDVVRSEKVSGTSTNGR
TELATILDFIGRGDVLVVTRIDRLARSIGDLQDIVRSLRVKGAALQATEQPIDTATAA
GKAFLDMLGVFAEFETNLRRERQLEGIAKAKAEGVYKGRPASIDVAQVRALKAEGIGP
AEIARRLGIGRASVYRLLGEANA"
gene 29007..29960
/locus_tag="M446_RS36395"
/old_locus_tag="M446_7008"
CDS 29007..29960
/locus_tag="M446_RS36395"
/old_locus_tag="M446_7008"
/inference="COORDINATES: protein motif:HMM:NF016292.3"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ABC transporter substrate-binding protein"
/protein_id="WP_265576691.1"
/translation="MSASGLRTSRAEAAGVIRVGVLNTGQESAGRRARAAALRQGIAE
QSLASDRQIALDFIWAGAEPEATRLAARALVEARTEVLVGAGTSATAALMRETRTLPI
VFVSVSDPIGEGFAASYSKPGGNATGLSNFEPSMTAKWLELLEEIAPGTTRPALLFHP
KTAAGQGQFFWRPFSAAAASLNLDPIPVSVDRMEDVEAATVELARQPGTALAIAPSSF
TSLHGLEIASSANRRGLPTVFPFSEFARGGGLISYGAHVLDLFRRAGSFVIRIANGEH
PADLPVEAPTHFELVVNARTAKMLGLAVPPLLLARADEVIE"
gene 30585..30800
/locus_tag="M446_RS33875"
/old_locus_tag="M446_7009"
CDS 30585..30800
/locus_tag="M446_RS33875"
/old_locus_tag="M446_7009"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018259599.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012290055.1"
/translation="MQRFYFDLADGVTTIRDDVGVEAVNLDEALEEAEAVIREMRANG
ELAHLGDGWTLSIRAEAETVLAILLVE"
gene 30897..31229
/locus_tag="M446_RS33880"
/old_locus_tag="M446_7010"
CDS 30897..31229
/locus_tag="M446_RS33880"
/old_locus_tag="M446_7010"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012332709.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_265576686.1"
/translation="MPYHPVMPTADPTADHSTFVSEWNRGLASLSPGQPPCPGFRPED
WATTLENCRRFVDEFGAEAARLGWDTILLFGVHPQAGIIRGDWSGVMMPCSYPVFEVT
EAYLKKHL"
gene complement(31525..32400)
/gene="istB"
/locus_tag="M446_RS33885"
/old_locus_tag="M446_7012"
CDS complement(31525..32400)
/gene="istB"
/locus_tag="M446_RS33885"
/old_locus_tag="M446_7012"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012290057.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS21-like element ISMtsp8 family helper ATPase
IstB"
/protein_id="WP_012290057.1"
/translation="MSGTGELIPPLVERIKATLVGLKMPRALEIVDTTVRRLERGELS
ALEAVDALLSEELSLRESRRVKTALVMARLSTVKTLSGFDFAFQPSLDRTRILALAEL
GFVDRCEVLHFLGPPGTGKSHLAVALGVEAVKAGRSVYFTTLADLVGTLARAEREGTL
REKIRYFCRPALLIVDEIGYLPVVPGGGNLFFQLVNARYERGAMVLTSNRGFAEWGEV
FGDPVVATALLDRLLHHAVVVQIEGSSYRLRQHTALMPEHIRSKAALQAPPLAPPPRR
RGRPPKNGGAHLGIA"
gene complement(32397..33680)
/gene="istA"
/locus_tag="M446_RS33890"
/old_locus_tag="M446_7013"
CDS complement(32397..33680)
/gene="istA"
/locus_tag="M446_RS33890"
/old_locus_tag="M446_7013"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_076612363.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/GO_process="GO:0006313 - DNA transposition [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS21-like element ISMtsp8 family transposase"
/protein_id="WP_012290058.1"
/translation="MVSLGELMTILDLHRQGLSVTAIARQLGLDRKTVAKYIARGLEP
PVYGPRSPRARATDAFLPYLRERLAAYPQLTAVRLWRELKERGFAGAYTAVKRAVALL
RPSAPLPIERRFETPPGEQAQVDLARFEVVFADEPGVTRIVWLFAMVLGHSRYLWARF
VVHQDLQTVLRCHIAAFQALGGAPREILYDRMKTAVIGEDPDGLVIYNRSLLDLARHY
GFLPRACRPYRAKTKGKVERPFRYLREDFFLARSFRNLDDLNDQLRHWLDTVANARRH
ATTKRIVADAFAEERSQLRALPPVPYEAVLSLERRVTHEGFVSVAGNLYSVPDTTRRR
ALEVHVLADQIRIYEAGELVACHLPLEGRGLTQVDPAHRRPRSPPPEPRDPAEPVVVR
RAGDQVARRPLAIYDAVARQLAGAGVPRTDRGDAA"
gene 33851..34285
/locus_tag="M446_RS33895"
/old_locus_tag="M446_7014"
CDS 33851..34285
/locus_tag="M446_RS33895"
/old_locus_tag="M446_7014"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018261437.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012290059.1"
/translation="MPIRPEHRGFYPIDWPQLSDVIRFRRAGGRCEGCGRPHLQRIAC
LPDGRWFDAATDTWRDGCGRILRSRMLLENLLYTVRFTRVVLATAHRNHDTSDNAPGN
LAALCQRCHMIHDRPEHQRRRRFTLFSRKAAGDLFRGPYRKL"
gene complement(34297..34827)
/locus_tag="M446_RS36400"
/old_locus_tag="M446_7015"
CDS complement(34297..34827)
/locus_tag="M446_RS36400"
/old_locus_tag="M446_7015"
/EC_number="2.3.1.-"
/inference="COORDINATES: protein motif:HMM:NF012792.3"
/GO_function="GO:0008080 - N-acetyltransferase activity
[Evidence IEA]"
/GO_function="GO:0016747 - acyltransferase activity,
transferring groups other than amino-acyl groups [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="GNAT family N-acetyltransferase"
/protein_id="WP_168169207.1"
/translation="MTGRIIVQPFDRTRSRNTFECGRRGIDQWYRNHSKKWSDRAEAR
ITIAVDEDTNAVAGFHALQIGSESMAELENKPDDHTKNYTAFPALHLAYLGVQKEYQR
KGVGTILLKDVIDKAYKVSLLAGLYALTLQSIDRQSTMFYESLGFEPYTRDNIAPKML
IPIRTIIDLVEGGAGG"
gene complement(34824..35036)
/locus_tag="M446_RS37860"
CDS complement(34824..35036)
/locus_tag="M446_RS37860"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_150108909.1"
/translation="MYTFREFLRWFTQSSDKAEKLEFKSQREAAEFVRRIYNQNGAPN
QKLRDLYNKADQLERDGRVIKKASAA"
gene 35186..35536
/locus_tag="M446_RS33900"
/old_locus_tag="M446_7016"
CDS 35186..35536
/locus_tag="M446_RS33900"
/old_locus_tag="M446_7016"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012332378.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012290060.1"
/translation="MTRHPRRAHDDQGREIPPPTIGWLRSEEGDRTAFVHCNATGCGH
EATISTDPFPDSLPFPDIALRLRCAACGSREVGVMRDVVGIYARLGRRTGWSMGAAGA
RPVARRDAPDRDRP"
gene complement(35666..35854)
/locus_tag="M446_RS33905"
/old_locus_tag="M446_7017"
CDS complement(35666..35854)
/locus_tag="M446_RS33905"
/old_locus_tag="M446_7017"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012290061.1"
/translation="MTTPREIPPASALWRARRRALSLPSSYTTTRDTTRASMDDLFKD
VSITQRRQVDSSIKAGPR"
gene 35914..37113
/locus_tag="M446_RS33910"
/old_locus_tag="M446_7018"
CDS 35914..37113
/locus_tag="M446_RS33910"
/old_locus_tag="M446_7018"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012330183.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/GO_process="GO:0006313 - DNA transposition [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS256-like element ISMtsp13 family transposase"
/protein_id="WP_012290062.1"
/translation="MTDEMMSLRGLLEKSADADLLREMIGFAAERLMELEVGGLTGAA
HGEKSAERLVQRNGYRDRDWQTRAGTVELRIPKLRKGSYFPAFLEPRRMAEKALTAVI
QEAYIQGISTRSVDDLVQAMGGTGVSKSQVSRLCQEIDERVGAFLDRPLEGEWPYLWI
DATYVKVRQAGRIVSVAVIVAVGVNSDGRREVLGMDVGPSEAETFWTGFLRKLARRGL
RGVKLVISDAHTGLKASVAKVMNATWQRCRVHFMRTVLAHAGRSGRRVVSAFIATAFA
QDDAEAARQQWRRVADQLRPKVPKLAALMHEAEPDVLAYMGFPAAHRVKLHSTNPLER
LNGEIKRRTEVVGIFPNEAAITRLVGALLLEQNDEWAVQRARYLTLESIAPISDDPLV
SLPTLAA"
gene complement(37156..37845)
/locus_tag="M446_RS39415"
/old_locus_tag="M446_7019"
CDS complement(37156..37845)
/locus_tag="M446_RS39415"
/old_locus_tag="M446_7019"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012290063.1"
/translation="MCAYAGSIIFSAKNLCDTPRWSAVEARGGPTSVNPRSGAFGIAQ
WLSRDRLAPIRGNTDFDAQLRHALHELHTTERRALAKLNSAKTPFEAATGASMFERAE
GYNARTGVDLFTGRTAAAMGGLKVGPPGEPVQVASGGDVLWYKRDRYYPSKAGGYSRL
RDDEVVNDLKDGPPSQKIAMSRVGDDMMQRRFNSAGASAGSGKGHLHITMDGFPTGTR
ARASVVSPGVV"
gene complement(38037..39338)
/locus_tag="M446_RS33920"
/old_locus_tag="M446_7020"
CDS complement(38037..39338)
/locus_tag="M446_RS33920"
/old_locus_tag="M446_7020"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018264030.1"
/GO_function="GO:0004650 - polygalacturonase activity
[Evidence IEA]"
/GO_process="GO:0005975 - carbohydrate metabolic process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="glycosyl hydrolase family 28 protein"
/protein_id="WP_265576687.1"
/translation="MTVGATHSAQSQDRRNVQEPVPPTQVCAVLSADDAPSAKVGQAK
LQAALDGCRTGQAVRLTPSRTKAVFASGPIEMRAGVVLWLDAGAVLAAEPDPRLYDLG
DGRCGLINNAGGGCRPFLNFHKANGAGLMGDGTIDGQGGAVMIGKAETWWALASRAQV
EGREQNVPRLVQIDSSNNITVYRITLRNAPNVHIAMNKVQGVTVWGVTINTPADARNT
DGIDPGAAMDVTIARTFISTGDDDIAIKAGDNGATRHVSILDIHIYSGHGLSIGSETN
SGVSDVLVRNVTIDGAVSGLRIKSDPSRGGLVQAVRYENVCVRGSRRPIDFDTRYDPR
AQGTKIPVYSNIVLRQVAGEGGRLVMHGYDAAHPLGVSLDGVRFVDNATWDVVNTQAI
VMAGGVTPPIGAPAAAWSAVNGPNCKALWTPFPGDTAVQSH"
gene complement(39612..40743)
/gene="phaC"
/locus_tag="M446_RS33925"
/old_locus_tag="M446_7021"
/pseudo
CDS complement(39612..40743)
/gene="phaC"
/locus_tag="M446_RS33925"
/old_locus_tag="M446_7021"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018263961.1"
/note="frameshifted; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="class III poly(R)-hydroxyalkanoic acid synthase
subunit PhaC"
gene complement(40740..41564)
/locus_tag="M446_RS34420"
/old_locus_tag="M446_7022"
CDS complement(40740..41564)
/locus_tag="M446_RS34420"
/old_locus_tag="M446_7022"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012330751.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="poly(R)-hydroxyalkanoic acid synthase subunit
PhaE"
/protein_id="WP_012290065.1"
/translation="MDLFDTFKAMGELWGKGTQCFLEAQRNMYGAMTTALDKDGKPSL
PLIPDWEALEQAQHSYQQGWEAAQAVSATFAKSLKGGGEVRDPIAADVLAKIFDPHGW
ICITGAVDEALKRMAEGPRLADLWNVERKFAAVFTAWVALHRRNLEHNALMMEVWKKA
TAAFSAVVNERSKNEQGIASSRELMALWVETANDVLLEAQRSEEFLKSQRETLKASTD
LRLAQQDIAEFYSQMFGYPTRAELDDVHQSLTQLRREVRALSRQRRTSGKSEGEPT"
gene complement(41586..42764)
/locus_tag="M446_RS33935"
/old_locus_tag="M446_7023"
CDS complement(41586..42764)
/locus_tag="M446_RS33935"
/old_locus_tag="M446_7023"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_020095073.1"
/GO_function="GO:0030554 - adenyl nucleotide binding
[Evidence IEA]"
/GO_function="GO:0046872 - metal ion binding [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="iron-containing alcohol dehydrogenase"
/protein_id="WP_012290066.1"
/translation="MTPFTFQTCPNILFEPGASAKLPDLVASFRAQRIMLVTGKNVRG
AGLTRAAEAALASAGLQVTVFEDVVADPPSHVIETAAQLAQQQTVDLVLAIGGGSTLD
TAKLVAYLARSGDQLDRIYGVGLAQGQRLPLILMPTTAGTGSEVTPISIVTTPTGEKK
GVVSPRLLPDCAVLDPDLTLGLPAHVTAATGIDAMVHAIEAYTSRHKKNPISDQLARK
ALALLAGSIRTACSDGRNVEARSNMLLGSMLAGMAFANAPVAAVHALAYPIGAVFHVT
HGVSNALVLTGVMRFNLPQAEALYAELAPIFDPQAASLPAAEAATRFVDSLAAICRDC
GAPASLAEVGVREEDLARLATDAMKQTRLLVNNPREVTYPDAFAIYSEALDGKLRTVA
"
gene complement(42799..44520)
/locus_tag="M446_RS33940"
/old_locus_tag="M446_7024"
CDS complement(42799..44520)
/locus_tag="M446_RS33940"
/old_locus_tag="M446_7024"
/EC_number="2.2.1.6"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018264061.1"
/GO_function="GO:0000287 - magnesium ion binding [Evidence
IEA]"
/GO_function="GO:0003824 - catalytic activity [Evidence
IEA]"
/GO_function="GO:0030976 - thiamine pyrophosphate binding
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="acetolactate synthase large subunit"
/protein_id="WP_050777596.1"
/translation="MPACEDENVGASSKIKGSDLIVKALENMGVDYVIGIPGEEILEI
IESLHNSKIRFIPVRHEQAAVMMAATHGRLTGRPGVCLATCGPGALNLVTGVAYAQLG
AMPVLIITGQKPISAPPQSRFQLIDTVSVMRPLTKMTRQIVSAASIPTLVREAFRVAT
DERRGAVHLEVPKDVATEDVATEMAEVALAPSHPIDRPVAAEAAIEHAAAMILSAQSP
LIMIGAAGNRPGLGEPLSEFVRRTQIPFCDTQMGKGAVTGASSLYLGTAALSERDYVH
AAIDRADLIISIGHDAVEKPPFLYEKIAGGLKVIHIGYTPASVEQVFHPDAEVVGDIS
STVTALADRLGGRLEPDPGMLELRQSLLERINGINDGTEEATSSMTVRRIVHAVRTVM
PEDGFVCLDNGEYKIEFARYYLTYAPNTLLLDNALATMGAGLPSAMMAAELYPERRVL
AVCGDGGFMMNSQEMETAVRLRLNLVALILDNSAYGMIRRKQREGGFAEYGTTFTNPD
FVAYANSYGATGHCVTAVRDLAPTLEAAFKAGGVHLVAVPIDDSENKRVLIQEHHHKA
SNIEPEE"
gene 44979..45682
/locus_tag="M446_RS36410"
/pseudo
CDS 44979..45682
/locus_tag="M446_RS36410"
/inference="COORDINATES: protein motif:HMM:NF033580.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="frameshifted; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS5 family transposase"
gene complement(46012..46977)
/locus_tag="M446_RS33955"
/old_locus_tag="M446_7027"
CDS complement(46012..46977)
/locus_tag="M446_RS33955"
/old_locus_tag="M446_7027"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018264025.1"
/GO_function="GO:0016787 - hydrolase activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="dienelactone hydrolase family protein"
/protein_id="WP_012290069.1"
/translation="MRILAATLVALGIAAPAAEAASPLPGRIEIHAVKSRTLTGEEFL
RGDAPGREVVLGGELRLPVGAPPKVPVVVLVHGSGGISAGPDAWARVLNEAGIGAFIL
DAFTGRGIVSTIEDQEQLNSLAMMVDAYRALDALAAHPRVRADRIAVMGFSKGAVASV
YSAAERFHAAYGGPNRFAAHIGLYTPCNVTYREDDKVGPAPIRLFHGTSDDYVSVLPC
RDYVARLKQAGADVMLTEYPDTQHSFDTPTSPPLVSIPKAQSTRDCRLKEGPGGTILD
AATGRPYSLRTDPCVAVGAHVGHNPASTEAARAAVVGFLREVLLK"
gene complement(47642..>47794)
/locus_tag="M446_RS37875"
/old_locus_tag="M446_7030"
/pseudo
CDS complement(47642..>47794)
/locus_tag="M446_RS37875"
/old_locus_tag="M446_7030"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015934039.1"
/note="incomplete; partial in the middle of a contig;
missing N-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS630 family transposase"
gene complement(48073..48237)
/locus_tag="M446_RS38505"
/old_locus_tag="M446_7031"
CDS complement(48073..48237)
/locus_tag="M446_RS38505"
/old_locus_tag="M446_7031"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012290070.1"
/translation="MTGRRTLYLPADQAKAIKATGRGHVPRIEKVLREALQAGKLDAP
RDLLEQAPKR"
gene complement(48234..48515)
/locus_tag="M446_RS33965"
/old_locus_tag="M446_7032"
CDS complement(48234..48515)
/locus_tag="M446_RS33965"
/old_locus_tag="M446_7032"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018264008.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="helix-turn-helix domain-containing protein"
/protein_id="WP_012290071.1"
/translation="MTNKHIGSSFDSFLEEEGTREEVNEQATKRVLAWQIEQAMKEQG
ITKSVMAKRMHTSRAQLDRLLDPENDKVQLDTVKRAAAVVGRKVRLELA"
gene complement(48505..48864)
/locus_tag="M446_RS33970"
/old_locus_tag="M446_7033"
CDS complement(48505..48864)
/locus_tag="M446_RS33970"
/old_locus_tag="M446_7033"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018264009.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type II toxin-antitoxin system RelE/ParE family
toxin"
/protein_id="WP_012290072.1"
/translation="MEQELKKLPAAFYATDSGKEPVREWLKDQTPDDRKVIGQDIATV
EFGWPVGMPTCRPMGAGLWEVRSDLSDGRISRVLFCIAHGHMVLLHAFIKKTQKTPDA
ELTKARKRQKKVEKNDK"
gene 49244..49996
/locus_tag="M446_RS33975"
/old_locus_tag="M446_7034"
CDS 49244..49996
/locus_tag="M446_RS33975"
/old_locus_tag="M446_7034"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012290073.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/GO_process="GO:0006313 - DNA transposition [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS6-like element ISMtsp1 family transposase"
/protein_id="WP_012290073.1"
/translation="MILNALALKLKREARGDFTGRHFEATLIVQAVSWYLRYALSYRD
IEEMLLERGMGVDHSTINRWVLAYAPAIERRLRRFRKPHCGSVRVDETYIKVRGQWRY
LYRAIDKHGEAVDFLLTANRDLEAAKRFFRKMLQDQPLLAPDRIGTDGAGPYPPAIAE
SRKEGLLPRAPIHHVTKHLQQGIESDHFRVKRPMPRVGGFRAFHTARRTIQGFEAMLW
LRKGFGFSGAWTVREQNRLLAQCFGLPVANKA"
gene complement(<50034..50168)
/locus_tag="M446_RS37880"
/old_locus_tag="M446_7035"
/pseudo
CDS complement(<50034..50168)
/locus_tag="M446_RS37880"
/old_locus_tag="M446_7035"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012290073.1"
/note="incomplete; partial in the middle of a contig;
missing C-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS6 family transposase"
gene 50530..51300
/locus_tag="M446_RS33980"
/old_locus_tag="M446_7036"
CDS 50530..51300
/locus_tag="M446_RS33980"
/old_locus_tag="M446_7036"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018261814.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_043703230.1"
/translation="MNTFSEDDAVKSWIHNAPQYHDYFLFADNVAATAGGTFLGENTA
DPNATGTAIYTELSNLPTAVSSILKHSQKRANFHPATTSPEVLAAAFNGYVTEIDNNP
FLALSRNTATKMAYEDKNYNALFDQICSLYAGLSEDDLRNIEKTISDMAKSVSSENHS
EEWKNLFSQSTINMRDPSQPKLYLYYTALYMSHDKSKKKEVARQGFEVRCTEFSILTL
KIKASAGKLVALDTTNVTDWLRDSTSPTDPNVKLCFQA"
gene 51465..52106
/locus_tag="M446_RS33985"
/old_locus_tag="M446_7037"
CDS 51465..52106
/locus_tag="M446_RS33985"
/old_locus_tag="M446_7037"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018261815.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012290075.1"
/translation="MTETERLYETLSKIAEAANTAVRHWHDWEALEQAQHSYQQGWEA
AQAVSATFAKSLKGGGEVRDPIAADVLAKIFDPHGWICITGAVDEALKRMAEGPRLAD
LWNVERKFAAVFTAWVALHRRNLEHNALMMEVWKKATAAFSAVVNERSKNEQGIASSR
ELMALFAICWFCSGWSGGSNPSLVHRCRRTHHTLGHQLLAETREITLSFRARA"
gene 52125..53759
/locus_tag="M446_RS33990"
/old_locus_tag="M446_7038"
CDS 52125..53759
/locus_tag="M446_RS33990"
/old_locus_tag="M446_7038"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012290076.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="acyl-CoA synthetase"
/protein_id="WP_012290076.1"
/translation="MTAKTIYDHGLDRNPANFQPLTPLTFLERTATVFPDHVAVIYGS
LRRSYRDFYARTRRLASALAARGIGRGDTVAVMLPNTPALIECHYGVPMTGAVLNTLN
TRLDAAMIASFLDHGEAKVLITDREFARVIKPALAHAKVRPLVIDYDDPEFSGEGERL
GSLDYEAFLASGDPAHAWSLPGDERDAITLNYTSGTTGDPKGVVYDHRGACLQAVGNV
VTTGLGKHPVYLWTLPMFHCNGWCFPWTLSVVAGTHVCLRQVRAKAVYDAIADHGVTH
LCGAPVVMQQLLNAPAAERRALPHPVSFVVGGAPPPEAGLAGMAEAGFDVTHVYGLTE
TYGPAVVNEWHADWDALTTPEQAARKARQGVRYPPLEALDVLDPKTMRPVPADGQTVG
EVMFRGNVVMRGYLKNPKATEEAFRGGWFHSGDLGVKHPDGYLQLKDRSKDIIISGGE
NIWSIEVEEALFKHPAVADAGVVGKPDEKWGEAVCAFVERKNGFEMVSAEELIDWCRQ
SLASYKVPKHVFFTELPKNSTGKTNKVQLREMGKAL"
gene 54292..54675
/locus_tag="M446_RS33995"
/old_locus_tag="M446_7039"
CDS 54292..54675
/locus_tag="M446_RS33995"
/old_locus_tag="M446_7039"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012290077.1"
/translation="MQGKSLHERAASGKRDDEAAAKRAEEYLRQHFPGFSGWAPCDDP
TGHISHGTPEMLAVFAIGCLEGLIAHADMAIRCLQRHDQPGMRAHIRSHIRAEREFER
TGVEIIGMLFEPKMQAKAAIAGVAA"
gene 54672..56024
/locus_tag="M446_RS34000"
/old_locus_tag="M446_7040"
CDS 54672..56024
/locus_tag="M446_RS34000"
/old_locus_tag="M446_7040"
/inference="COORDINATES: protein motif:HMM:NF011296.0"
/GO_function="GO:0003896 - DNA primase activity [Evidence
IEA]"
/GO_process="GO:0006260 - DNA replication [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="phage/plasmid primase, P4 family"
/protein_id="WP_012290078.1"
/translation="MTANVRPIRRPAPPDNDPVLTESSIAALVVERFRDQLLYDHGQA
LWFEWAGTCWVPDTTGGVFDRCHTVVQEQMRLLSPKKQVRLGTAKFVSGVEKLCRHAR
TFVAQSEDWDGDPMVLGTPGGVVDLTTGKMRRAEPGDRITKQTAVAPADTADCPRFLR
FLNEATGSDLGLMRFLQQWAGYSLTGRTTEHAVVFVFGGGGNGKSVYLKVLATALASY
AATATMDAFVASKHAQHTTDLAMLKGARFVSASETQEGRAWDEARLKSFTGGDAITAR
FMHRDNMTFVPTCKITIVGNHKPKIRTVDEAMRRRLNIVPFIRKPAEPDPDLERKLLA
ELPGILRWPIDGCLDWQEHGLIRPDAVLAATDEYLADEDLFGQWVEDRCKVDPGNRQM
RTPNQDLYASWCDFAERVGARHGTLHELGEKLSKLGLARYKSGGVRGFEGIYVTSTGA
"
gene 56815..57489
/locus_tag="M446_RS34005"
/old_locus_tag="M446_7041"
CDS 56815..57489
/locus_tag="M446_RS34005"
/old_locus_tag="M446_7041"
/inference="COORDINATES: protein motif:HMM:NF012464.3"
/GO_function="GO:0000150 - DNA strand exchange activity
[Evidence IEA]"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0006310 - DNA recombination [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="recombinase family protein"
/protein_id="WP_012290079.1"
/translation="MATYGYQRVSSEGQEDGTSLDEQGKRIRGLCMMQGLDEPVFFRD
VCQGKIPLGDRPGGCRLLHALKPGDNLVVLKLDRIFRNATDALTQADAFKAKGVNLYL
IDMGTEPVTNNGTSRMFFGMLALMAEFERERIRERTQDGKAAKAARGGYIGGSRPFGY
DVVGTGKDAVLRPRESEHEYVQQIVARREAGESLRSISAWLATRGVKLSHVGVANVRE
RDANPN"
CONTIG join(CP000944.1:1..57951)
//
