LOCUS NC_006392 50060 bp DNA circular CON 30-DEC-2022
DEFINITION Haloarcula marismortui ATCC 43049 plasmid pNG400, complete
sequence.
ACCESSION NC_006392
VERSION NC_006392.1
DBLINK BioProject: PRJNA224116
BioSample: SAMN02603385
Assembly: GCF_000011085.1
KEYWORDS RefSeq.
SOURCE Haloarcula marismortui ATCC 43049
ORGANISM Haloarcula marismortui ATCC 43049
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria;
Halobacteriales; Haloarculaceae; Haloarcula.
REFERENCE 1 (bases 1 to 50060)
AUTHORS Baliga,N.S., Bonneau,R., Facciotti,M.T., Pan,M., Glusman,G.,
Deutsch,E.W., Shannon,P., Chiu,Y., Weng,R.S., Gan,R.R., Hung,P.,
Date,S.V., Marcotte,E., Hood,L. and Ng,W.V.
TITLE Genome sequence of Haloarcula marismortui: a halophilic archaeon
from the Dead Sea
JOURNAL Genome Res 14 (11), 2221-2234 (2004)
PUBMED 15520287
REMARK Erratum:[Genome Res. 2004 Dec;14(12):2510]
REFERENCE 2 (bases 1 to 50060)
AUTHORS Baliga,N.S., Bonneau,R., Facciotti,M.T., Pan,M., Glusman,G.,
Deutsch,E.W., Shannon,P., Chiu,Y., Weng,R.S., Kan,J.R., Hung,P.,
Date,S., Marcotte,E., Hood,L. and Ng,W.V.
TITLE Direct Submission
JOURNAL Submitted (09-APR-2004) Institute for Systems Biology, 1441 N 34th
Street, Seattle, WA 98103, USA
COMMENT REFSEQ INFORMATION: The reference sequence is identical to
AY596293.1.
The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Date :: 12/30/2022 01:57:24
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 6.4
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA
Genes (total) :: 4,403
CDSs (total) :: 4,341
Genes (coding) :: 4,257
CDSs (with protein) :: 4,257
Genes (RNA) :: 62
rRNAs :: 4, 3, 3 (5S, 16S, 23S)
complete rRNAs :: 4, 3, 3 (5S, 16S, 23S)
tRNAs :: 50
ncRNAs :: 2
Pseudo Genes (total) :: 84
CDSs (without protein) :: 84
Pseudo Genes (ambiguous residues) :: 0 of 84
Pseudo Genes (frameshifted) :: 34 of 84
Pseudo Genes (incomplete) :: 58 of 84
Pseudo Genes (internal stop) :: 22 of 84
Pseudo Genes (multiple problems) :: 25 of 84
CRISPR Arrays :: 4
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..50060
/organism="Haloarcula marismortui ATCC 43049"
/mol_type="genomic DNA"
/strain="ATCC 43049"
/type_material="type strain of Haloarcula marismortui"
/db_xref="ATCC:43049"
/db_xref="taxon:272569"
/plasmid="pNG400"
gene 92..976
/locus_tag="RR_RS00575"
/old_locus_tag="pNG4001"
/db_xref="GeneID:3126764"
CDS 92..976
/locus_tag="RR_RS00575"
/old_locus_tag="pNG4001"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011222227.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS1595-like element ISHma4 family transposase"
/protein_id="WP_011222227.1"
/db_xref="GeneID:3126764"
/translation="MIPLDVFGSESVAADLLEQVRWRDGVTCPRCRSDRTVRNGSYRE
FQRYLCKNCDRTFNDKTGTIFAHSKIALRRWLFSIYAFLRFNTSLRQLQCEIEVTHKT
MHRRIERFARALDAPSLNLVGPVEIDEVYVSAGKKGRERDRESRSRGLSTRGRGSYSS
DKPPIFIIADRGTEQRYVIPAKAADESTIRLLLADRQQESLTVYTDGFRAYEPLEDDD
AFDREYVVHGDGEYADDEVHVNTCESHASQVRRWLSPHRGISKDKLTQYLRAFQLRRE
LFRKPGRDALKHAVQATL"
repeat_region 1032..1324
/inference="COORDINATES: alignment:crt:1.2"
/inference="COORDINATES: alignment:pilercr:v1.02"
/rpt_family="CRISPR"
/rpt_type=direct
/rpt_unit_range=1032..1061
/rpt_unit_seq="gttacagacggaccctcgtggggttgaagc"
gene complement(<1490..1945)
/locus_tag="RR_RS00580"
/old_locus_tag="pNG4002"
/pseudo
/db_xref="GeneID:3126791"
CDS complement(<1490..1945)
/locus_tag="RR_RS00580"
/old_locus_tag="pNG4002"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007189717.1"
/note="incomplete; partial in the middle of a contig;
missing C-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/db_xref="GeneID:3126791"
gene complement(1994..2845)
/locus_tag="RR_RS00585"
/old_locus_tag="pNG4003"
/db_xref="GeneID:3126800"
CDS complement(1994..2845)
/locus_tag="RR_RS00585"
/old_locus_tag="pNG4003"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011222229.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS5-like element ISHma10 family transposase"
/protein_id="WP_011222229.1"
/db_xref="GeneID:3126800"
/translation="MKRESNVMHNTLFRFVKQVASLAQKLTDAALMELSDPAGNGFAG
WKHAVLLYLREHMSAEYEEIIDWAEEMERVRAVLNLQRGEFPAPSTLCKAFKRASITV
WRQLLRRSAELLDQNGHAAIDATYFDRQQASSHYLRRIDRSVKTIQTTFLVDTAEGAI
LDLHCSTKWPDETKIGPKVALRNAGDLRSLAADKGYDDMSFREELRNAGICPLIKHRV
FAPYDHAHNARIDDELYGQRSQTESVNSSIKRSHGSAVRARDWFRQFREITLIAGVYN
VEQAIER"
gene 3093..3602
/locus_tag="RR_RS00590"
/old_locus_tag="pNG4004"
/db_xref="GeneID:3126784"
CDS 3093..3602
/locus_tag="RR_RS00590"
/old_locus_tag="pNG4004"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_005533745.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="radical SAM domain-containing protein"
/protein_id="WP_049938424.1"
/db_xref="GeneID:3126784"
/translation="MTRWQALDELQQAGVSVFVSMSPTYPTMGEDDFHELLSYFRALG
EVVVFHEPINPRGANFQQCLTAAKEAGYDDVVTELQQMQDSHQYWVEYALEQLNTVQQ
VATRFDGLEIHSWPDDELVRSTSGQLRSKLTAMQQAVSPESFSGKQTGTSAAQSGLTG
QKGALDQLL"
gene complement(3646..4101)
/locus_tag="RR_RS00595"
/old_locus_tag="pNG4006"
/db_xref="GeneID:3126793"
CDS complement(3646..4101)
/locus_tag="RR_RS00595"
/old_locus_tag="pNG4006"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011222231.1"
/db_xref="GeneID:3126793"
/translation="MSTGLAIVGTIAAGYVLDQLSQSNKDHDDVLKDTYQAVSQAAAA
DSSLYVDHIDVDAAGNPRSATPGTDHVPDLVLTGFADNSIVVEVETGDSLNGDALDQL
EDFSKPGYTRALVVPDSVVDDGIQFIEEYTDAATANIVVCGPSDTPKLL"
gene 4210..4557
/locus_tag="RR_RS00600"
/old_locus_tag="pNG4005"
/db_xref="GeneID:3126799"
CDS 4210..4557
/locus_tag="RR_RS00600"
/old_locus_tag="pNG4005"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_232508500.1"
/db_xref="GeneID:3126799"
/translation="METIHPAQVDLESFAAAHHNADPWMGWFRASDGPIDSGAAYGDI
DSEPDLAEFIHSNENSQLGLTNLKYDGRLLKLVLSESGWLAIYDPKDMDTIEFTRFIH
DEVLPHTSPKLMS"
gene 4652..5065
/locus_tag="RR_RS00605"
/old_locus_tag="pNG4007"
/db_xref="GeneID:3126783"
CDS 4652..5065
/locus_tag="RR_RS00605"
/old_locus_tag="pNG4007"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_004592290.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011222232.1"
/db_xref="GeneID:3126783"
/translation="MFWMCTRCETVHTQNPDECRECTATTFEPVAESDLQSSSSTGPD
ALDDTDTQTYGTTPDPGFESSPDVAVDGSVEASQHDTLPAHKEASGSGLTATARRAYH
TLRATILAPVALVRQYLLPILAFAIVVVVVLWLLS"
gene complement(5078..6334)
/locus_tag="RR_RS00610"
/old_locus_tag="pNG4008"
/db_xref="GeneID:3126776"
CDS complement(5078..6334)
/locus_tag="RR_RS00610"
/old_locus_tag="pNG4008"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011222233.1"
/db_xref="GeneID:3126776"
/translation="MFEATLRYNSNSDKHPVGTSLEYLDSVLVPARMLAANAKALPSN
LQNYADDAGVSYYIDPSLTDFRVGDDFRDDSGSVRRWHWEYAEQVDPLLEELLTKQEN
LDASQLPDSHVETLTKASVAFQEGFVVTQLEEEVGKYDSLSDPDSYRPTAVIPWYHKI
RTPSDIEVNDTILTAARDAASLPLKPCLFITKDILRSSTHLDELLSLLSEHNIEQCFI
WVENLDKHETGQHDYEHIARFVSDLADAGVSPHFYYGDYFATLLSHLGLDGTIYGSMY
GEEDAERREQRGGGGVITRYYLDEVSDFVKIPAVVDVQQRVGAEMCECDVCERQFDSW
QDLAALENDDDENIQTPMKKHHLRIRWRQIRQVESESLTDSLDRLESDYQEYVMPFSR
SNQVADSKSLNYLPCWQNALEAIVSE"
gene complement(6300..6794)
/locus_tag="RR_RS00615"
/old_locus_tag="pNG4009"
/db_xref="GeneID:3126781"
CDS complement(6300..6794)
/locus_tag="RR_RS00615"
/old_locus_tag="pNG4009"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_004966466.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011222234.1"
/db_xref="GeneID:3126781"
/translation="MSKVDHDPASRRYAKKWQETLDRDESYYIPEKYQLGIVANYLSR
HDITYTTEGEVFCYPIDILAVKRGSTIAIELKSRNVGAGIEQAQRNTDYVDYSFLSLW
DDDITDELLSRVSDLNIGLLGVGETVTVYSGPSQTGQELCKRSSVIETILDDVRGDPP
IQQQ"
gene complement(6802..7314)
/locus_tag="RR_RS00620"
/old_locus_tag="pNG4010"
/db_xref="GeneID:3126762"
CDS complement(6802..7314)
/locus_tag="RR_RS00620"
/old_locus_tag="pNG4010"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_004966465.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type II toxin-antitoxin system antitoxin SocA
domain-containing protein"
/protein_id="WP_049938427.1"
/db_xref="GeneID:3126762"
/translation="MPPIDSIDRRTDVAFLLFQYAETIEGVTKLQKLLFLIEQETEFF
EAYQEDIAFEFAPYKMGPFSEYVYEEIEFLLSLNAIESEPLDRAISNDNNATLAEKRF
SITPKGQKIASELEKQLEAKYRQELRTVVDTYNRMALTRLLEYVYREYPSFAAESEIL
DELDVESGPV"
gene 7532..8287
/locus_tag="RR_RS22000"
/old_locus_tag="pNG4011"
/db_xref="GeneID:41340144"
CDS 7532..8287
/locus_tag="RR_RS22000"
/old_locus_tag="pNG4011"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="HNH endonuclease"
/protein_id="WP_148205376.1"
/db_xref="GeneID:41340144"
/translation="MKSGEECPTCGEIYADDHGMKVHHKLTHGESLAKETLACEQCGE
EFSEFQSRIERGKGVYCSKECKYSQGQIKTECDWCGESVTKNKNRAERYSNHYCSKSC
YQKHYTERVSETSEHPSYQGGPETVECDNCSKELELYCHRFTDHNFCSIECRTELFQG
ETHPDFEHGGSRYYGSDWASYRIDALLEWEGRCASCGLTEPTHIRTYGKSLDIHHEPP
VEEFDDIETAHEEAELQPVCVKCHSKVENREVA"
gene 8284..9147
/locus_tag="RR_RS00625"
/old_locus_tag="pNG4012"
/db_xref="GeneID:3126760"
CDS 8284..9147
/locus_tag="RR_RS00625"
/old_locus_tag="pNG4012"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013876022.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ParA family protein"
/protein_id="WP_011222237.1"
/db_xref="GeneID:3126760"
/translation="MMTSSEIKRIATYVEKGGVGKTTSAAHIAVAAHNRGHEVLLVDL
AGTQNDLATHFGLSIVDEEATDDGVSIDAPISAVFGDDWAFLRDNIDDLLDRMTFPTD
EGPDLIPADPGLGGADNNLANVPLEERYQKLDGFVEDLVADKYDLVIFDLPGKEDNIA
LNGLFAARNVVAPLKPGAFERDQLQKLDATLEEISADLDVDLGLALIIPTIISSQETL
SESFVEYVTEEYPEIVGEPVTKTADIGNNQNAGRTLFAVPDDELYATGKRAREAYSAN
TEQLLSRLTDR"
gene 9144..9560
/locus_tag="RR_RS00630"
/old_locus_tag="pNG4013"
/db_xref="GeneID:3126779"
CDS 9144..9560
/locus_tag="RR_RS00630"
/old_locus_tag="pNG4013"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018258830.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_004966330.1"
/db_xref="GeneID:3126779"
/translation="MSDTTDDRDPEELLEQSKEQKRHQSEPQQQDTEPDAPSLEEYIA
DVYEELDAGEVPTNLTMRDRNLAALIRGLDEAGQLDAVGADVREYLDRDATDSESRGS
VLGLLVRAGLAEVRPDLIEAGEDGYETFTERQETQF"
gene complement(9743..10453)
/locus_tag="RR_RS00635"
/old_locus_tag="pNG4014"
/db_xref="GeneID:3126754"
CDS complement(9743..10453)
/locus_tag="RR_RS00635"
/old_locus_tag="pNG4014"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007189736.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011222238.1"
/db_xref="GeneID:3126754"
/translation="MGATDTAATVDAGVEPSLVDTIKNIEEGDLLVVNGTSRTWDVTD
VANHTIEGPNDARESKRVCRLSCGESVLGLELVAYPDHYTASLHAPAVEDWTEESQSF
DVHDVTILSQDIPWVVVTGGADKYHFPDPQAAAFGEARPACGGGNQSATYRIVRSNTV
RPTYAGCKDCLRREKPVALDHVTCPSCSRSICHGILRGSAVGAVDGLSITCPHCDFDG
VINVDVASGFAGVDDPTT"
gene complement(10453..10743)
/locus_tag="RR_RS00640"
/old_locus_tag="pNG4015"
/db_xref="GeneID:3126778"
CDS complement(10453..10743)
/locus_tag="RR_RS00640"
/old_locus_tag="pNG4015"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_004966072.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011222239.1"
/db_xref="GeneID:3126778"
/translation="MTDPDSQTPMHECQADLVVALDLDDFSPDAYTSASYLEAALEAG
VTVVDLATAHDVSKRSIYRVLDRHDIDYETPPKNGPARRLWNAHPDSVPGDD"
gene 10990..11811
/locus_tag="RR_RS00645"
/old_locus_tag="pNG4016"
/db_xref="GeneID:3126790"
CDS 10990..11811
/locus_tag="RR_RS00645"
/old_locus_tag="pNG4016"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011222240.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011222240.1"
/db_xref="GeneID:3126790"
/translation="MVHQWQCRECKFTVWSSKQSELVDAVKSHLLSHYKHTVESDEFS
LRWDCPYCNQTSQSYDADEGLAKFKNHLFKHVSALIDSGVHVADRIDRVGNILILSPL
ETAGADNARVHFTSPADVAVFVTNNPAERVRFLDNALQSWPAWTTILTTKAQPFADVT
DIDLEAAPLDIAILDKGVSMTELGETLVRVLDEQQTSNSRLTVGFDILSELLRLFDTE
TAFKFVHVLNSRLANMDALTHYYLNPNAQPESEINVLKELFDLQIRAKGSRFRTV"
gene complement(11821..13074)
/locus_tag="RR_RS00650"
/old_locus_tag="pNG4017"
/db_xref="GeneID:3126752"
CDS complement(11821..13074)
/locus_tag="RR_RS00650"
/old_locus_tag="pNG4017"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007189739.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="HEAT repeat domain-containing protein"
/protein_id="WP_049938429.1"
/db_xref="GeneID:3126752"
/translation="MFNDEPGDNETFLYKLERESEVQKLIAHLKRSRKNYVRRRAATM
LGNIAEISNPNERRQAVKALVSAVKSDEDDSVRAAATDALYQRGEDAFDYLVAELAEM
GGSEATERTATTLLTEWLSADHLEFRMVAATALGERGATAAVPDLVRALTDPAPRVRT
RAAQACGRLSDPRVVPPLSERLSDGRQQVREAAANALGAIGTDRALAELVPVTQADEE
GLRLIAVDELGQFGSVKPVVVLVDALDDDSTTVQRAAMLSLLELLTTASTEELELIRG
TVVDELARADVQATVPALLDIAADGTRRRYRQTAIWLLSRITGDRYRSEVIDCLLSTL
DKPDEETAQLAEAVLPELRSPELEKRLRVYLSRERGSEEARSRAQAVLDEICDGSSGE
LVTTGVDYTYVDSPADYTNQHSSRD"
gene 13272..13529
/locus_tag="RR_RS00655"
/old_locus_tag="pNG4018"
/db_xref="GeneID:3126787"
CDS 13272..13529
/locus_tag="RR_RS00655"
/old_locus_tag="pNG4018"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011222242.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_004966323.1"
/db_xref="GeneID:3126787"
/translation="MRYEKIVVREAGSLGSTTDSEPPDIRDESDHGQKMDLKTPAWDA
VRANINPGEYEPKTHVATIHYDLDEWDFVIEYLVEVDRERA"
gene complement(13638..14027)
/locus_tag="RR_RS00660"
/old_locus_tag="pNG4019"
/db_xref="GeneID:3126757"
CDS complement(13638..14027)
/locus_tag="RR_RS00660"
/old_locus_tag="pNG4019"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_004966322.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="response regulator"
/protein_id="WP_007189741.1"
/db_xref="GeneID:3126757"
/translation="MSSSVQEAIQVLHVDDEPDFQDLTVEFLEREDEQFSVVVASGAT
EALEIIDNDKPDCVISDFDMPRVDGLEFLRMIRIKYPQLPVVFFTSQDRETIIGSAIA
VGPTGYVKKEATAEQYEFLAEQIRSTM"
gene 14371..14970
/locus_tag="RR_RS00665"
/old_locus_tag="pNG4020"
/db_xref="GeneID:3126786"
CDS 14371..14970
/locus_tag="RR_RS00665"
/old_locus_tag="pNG4020"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007189742.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="site-specific integrase"
/protein_id="WP_007189742.1"
/db_xref="GeneID:3126786"
/translation="MRIEATEGNEYKVWLNDAEIEDLRRATNSQRDDLIIQIGAFVGL
RAFEIPQVRPVDVKQTESGQYRLRIQAGKDTSGNGGKPRDAFLPADVERDLQRFQNEH
NIAPKDPFIDLKQPGVRAVVRRTAARAAEATGDDDFEKVSTHDLRRRFAQRLLVDEQM
NPRVVMAVGGWDSFAAIEPYLNAPSEDVIDEAFQEVESL"
gene 14967..15386
/locus_tag="RR_RS00670"
/old_locus_tag="pNG4021"
/db_xref="GeneID:3126777"
CDS 14967..15386
/locus_tag="RR_RS00670"
/old_locus_tag="pNG4021"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007189743.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011222243.1"
/db_xref="GeneID:3126777"
/translation="MTDDDIDPEDPRPTGHYPRFADNEWHYVSDELAQTISLGPAGDG
EEGQDWVLTYTPERRDDDDREKVLVRLTPRALHELHIETKDLSVEQRQMGHRAECDLC
GEMVDLDRAIPNARGEPCHKRCWAEYTGAPDWFSDYL"
gene complement(15473..15787)
/locus_tag="RR_RS00675"
/old_locus_tag="pNG4022"
/db_xref="GeneID:3126801"
CDS complement(15473..15787)
/locus_tag="RR_RS00675"
/old_locus_tag="pNG4022"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012795367.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011222244.1"
/db_xref="GeneID:3126801"
/translation="MEKPSVKCALLATMIAKHKWGTPITEDALLNLSAIGDDYPTARE
VYADLRSEPYIIYRGNRGIELDKSNFDSLADVLYHECGWEAWEIESRLKHYEGIDDHH
WS"
gene 15880..16221
/locus_tag="RR_RS00680"
/old_locus_tag="pNG4023"
/db_xref="GeneID:3126792"
CDS 15880..16221
/locus_tag="RR_RS00680"
/old_locus_tag="pNG4023"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_004967263.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_007189745.1"
/db_xref="GeneID:3126792"
/translation="MSSMDHAADRGEKKELRKEHPSGWLYLTQHDAIPILVDALLDLP
PNREFNKTELAEHAGVTRQTVGNYTDLLLEVELIEVVPDTSPRRYRVADSDVVRELFE
LNSALNNVGSE"
gene complement(16325..16729)
/locus_tag="RR_RS00685"
/old_locus_tag="pNG4024"
/db_xref="GeneID:3126780"
CDS complement(16325..16729)
/locus_tag="RR_RS00685"
/old_locus_tag="pNG4024"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_006182386.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="WP_011222246.1"
/db_xref="GeneID:3126780"
/translation="MPTLKVTIGERDRLDRRTRSRIKAAQEGDNFEDVQPRLNFESYD
QLNRLLSPKNLELLEAISEHEPASIREAADLVDCDYKQVHRNLSELADIGVLEFEGGG
SGKAKTPKLVYDGLEVDIPFTGSNGTTSTAAP"
gene complement(16907..17275)
/locus_tag="RR_RS00690"
/old_locus_tag="pNG4025"
/db_xref="GeneID:3126788"
CDS complement(16907..17275)
/locus_tag="RR_RS00690"
/old_locus_tag="pNG4025"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011222247.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="helix-turn-helix transcriptional regulator"
/protein_id="WP_011222247.1"
/db_xref="GeneID:3126788"
/translation="MSESRLSDGEGAGALEEWVALTATERRILAEISKMEQEDWAMWG
GAVIDAVGEQHLSVSDKQVYRVLSKLVDRGWLVDLIPDKRTSRYALTPTGRDVLEAGH
AELTAAVDELPDELLSERRE"
gene 18012..19499
/locus_tag="RR_RS00695"
/old_locus_tag="pNG4027"
/db_xref="GeneID:3126794"
CDS 18012..19499
/locus_tag="RR_RS00695"
/old_locus_tag="pNG4027"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_004966316.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_232508501.1"
/db_xref="GeneID:3126794"
/translation="MLIGEDPDGDGYTVRTQQGQPIVIGRPAPSQYPSDAHEIRQRFN
IPAFDPEAFYRRTGAALSGVYPDMLIHIEDAADGPDTVTSPKASLTLIEAPKGSGKST
AIDQFATYQMEHNGERIVRNGRQQSSDWRRLRDWTTLWLPEGIDVNGRWMEAVDRDAP
TPEELVRAVRYYTDVFDLIEQLQDHPKGTFNVVYPDPLFRGCERAMAIPDTTTEQPKF
TPQGEDKPTPVVHWWFGFLAARTFRGTRVDSDGDRNWMTVYIDEFGMLAPESTSGGEA
GHWTYECVEIMSDTAKEMRSAGVSLVGAAHHEEDVHNHWLKEFDYWVELSNRERPNRT
TKAETPKPFRGLKQDQNLFASRPPGYGLCYTESRFSEFQFTDLGYPHETPEFQFRLSV
PESAAEDESDDAVQVATDEAGQPTIVEEYTAVDGAVHELRVLAPGSGLIDIGGDEPEI
VESPSSPYPDGSFPDSPLRETAEGYELLFERAAGEIIVAARVSHH"
gene complement(19557..19904)
/locus_tag="RR_RS00700"
/old_locus_tag="pNG4028"
/db_xref="GeneID:3126797"
CDS complement(19557..19904)
/locus_tag="RR_RS00700"
/old_locus_tag="pNG4028"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007189749.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_049938431.1"
/db_xref="GeneID:3126797"
/translation="MVTSVSCLNCGEPVDAQYARVFGNDDDEVHACRNCATQGAIANG
AAVDADRDGTPLVHRPDVDEPVEAVFHEAESEEDSEDYVTLEELREQPTTTQTGSSTD
HHDDEAFAALIAE"
gene 20053..20310
/locus_tag="RR_RS00705"
/old_locus_tag="pNG4029"
/db_xref="GeneID:3126789"
CDS 20053..20310
/locus_tag="RR_RS00705"
/old_locus_tag="pNG4029"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_004966314.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_004966314.1"
/db_xref="GeneID:3126789"
/translation="MPSINKLNVRGNSGMVTIPKDELDMCGLLDEDGTPDTEIQFLVK
MEQPGEWRISVLDESCVDDSWYTGDTPETGVQVGAGGGSRG"
gene complement(20371..20877)
/locus_tag="RR_RS00710"
/old_locus_tag="pNG4030"
/db_xref="GeneID:3126782"
CDS complement(20371..20877)
/locus_tag="RR_RS00710"
/old_locus_tag="pNG4030"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011222251.1"
/db_xref="GeneID:3126782"
/translation="MRPTLEAAFPAEITPADELGNIDVDPDRGPTGQTSLQTFAHTTA
ASVLGWCSVAIGALTKARLQKEKAEYLPDDCELKIVRPRRFAKGTLVSMALLVIMGIQ
MAEQGVYFNPVTMEAGTPAIPTLQVVGGSMIGALNTLWADYKVRIQDEPDKRGVFDAL
PFFGPDAE"
gene complement(20904..22178)
/locus_tag="RR_RS00715"
/old_locus_tag="pNG4032"
/db_xref="GeneID:3126798"
CDS complement(20904..22178)
/locus_tag="RR_RS00715"
/old_locus_tag="pNG4032"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011222252.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS4-like element ISHma1 family transposase"
/protein_id="WP_011222252.1"
/db_xref="GeneID:3126798"
/translation="MRRLTTLFPSEFLEEHAEELGVVEREGKLQIPVLVWALVFGFAA
GESRTLAGFRRCYNATADEPISSGGFYHRLTPTLAEYLRDLVEAALDEVAVPDAVDAD
IDRFRDVMIADGTVLRLHEFLSDEFQARHEEQAGAKLHLLHNATDQTIERIDVTDEKT
HDSALFKTGSWLQGRLVLFDRAYFKYRRFALIDENDGYFVSRLKQNANPVITAELREW
RGRAIPLEGKQIHDVVNDLSRKYIDVEVEAEFKRGQYEGTRSLDTKRFRVVGVRNEDA
DDYHLYITNLPREEFLPADLATLYRCRWEVETLFRELKTQYELDEFDTNNPDVVKILL
YAALLSLLVSRELLDLVTEQADDEIVFPPERWAATFRSHAQLILHELGEYLGYSPPPL
LERLIEDAQKIHQQRPILQETLATATQPRCES"
gene complement(22277..23455)
/locus_tag="RR_RS00720"
/old_locus_tag="pNG4033"
/db_xref="GeneID:3126785"
CDS complement(22277..23455)
/locus_tag="RR_RS00720"
/old_locus_tag="pNG4033"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011222253.1"
/db_xref="GeneID:3126785"
/translation="MPRRWTEQYMRERFPAEVREKRLEQGLDPTQKPTHEWLRENGYR
QFLRRARELGYTPDTFLLEECGFDERHKEWPCSDGELIRRLEDWLAYHEDVGERLNST
SIGDARTHLRRIMELSEQCIGTGNLLKYGRGEQTVCVRRAKHLMRALKTEFENSQTRS
NYITTFRDFLHDSYKDGYVEHEPITALVDRSGWTETTNGPGFAATTDLVKAYFEACET
RVEKFLILALAGYGVRPSSICGDEDRDAFVLDAEVPHMTFSDARKNGPGQMPLVIGVD
FVRSYFETLEQDPSYDGTILPSDRSADGARSAQWVRDKIAAIGERTDATLPNGNKPTP
KHFRQFWYTRFIETYSEWLDRADDVASMRGASSGQVAAEAYAGDSPWFKQFIRSSVFS
"
gene 24329..24712
/locus_tag="RR_RS00725"
/old_locus_tag="pNG4034"
/db_xref="GeneID:3126774"
CDS 24329..24712
/locus_tag="RR_RS00725"
/old_locus_tag="pNG4034"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011222254.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011222254.1"
/db_xref="GeneID:3126774"
/translation="MANTMAAGRSVIKRGGTSLYLGIKREWLAAAGTEPEGVFRLGLR
DIENSSMTVRLHIDQDYCETTLGPGAYDIDIVDIQTGLQWCLPADIRNKYGITNQFVW
NAEFTGEHIDYELVSPTIQEQYQLS"
gene 24830..25390
/locus_tag="RR_RS00730"
/old_locus_tag="pNG4035"
/db_xref="GeneID:3126765"
CDS 24830..25390
/locus_tag="RR_RS00730"
/old_locus_tag="pNG4035"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007189753.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type IV pilin N-terminal domain-containing
protein"
/protein_id="WP_079890956.1"
/db_xref="GeneID:3126765"
/translation="MEEKRAVSPVISVILMVAIAVILAATIATFVLGFAEDVDNPAPS
VGQTSGEFVAGGDRDQQVVRITHVAGDSVAVENIEIIVRASGPGVDTEARLVDLPSTA
SSKLLNENIDGNDDLIDQRSGSTKLIADDGTDVWSAGETIEFRVNSGTADFRDGETPA
ANELEVDIVYVDSESSATLFEETFRP"
gene complement(25511..28915)
/locus_tag="RR_RS00735"
/old_locus_tag="pNG4036"
/db_xref="GeneID:3126768"
CDS complement(25511..28915)
/locus_tag="RR_RS00735"
/old_locus_tag="pNG4036"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011222256.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="aminotransferase"
/protein_id="WP_011222256.1"
/db_xref="GeneID:3126768"
/translation="MTFHVVGCSDCSALWIIDESRDSKACCPTCGRTHSREHLRSLAS
AADREVAAQRRSAILASRRDESDADLRAYWDQATDDPVIDDREYLDGMGLDDDLVDNL
CGESSSTSTTSDSSTTRPDSGPDVDVDVANKPQLRGSAYPDAAEEPGIALLDLRGQLS
ITGLTYHDVAPQSSEWLGDLLADLIPMTARCVQDLAVLHEEGPDPSDPRQTNYEVPRF
VQEVLAGEVAGLEAADASVGAIEEARAYLDAAARYALLWDNECYRAQRGFKGTEQFER
IQRTLTTTGTSRGPFNAGVDALRHSLVALHAERETPLPVTFVLDGEAWTAADRETVKR
ALRVLDVLADALDVRLQMSPGVRQRVRRLTLRALDADDEADIPAWAERFSFLTEAGYS
SRRGGDVDEDSDEGQLDEEAWGWVDTNRSQTGPLTVLAHLDTDGERSVRAIKRDDAIA
YADGSIDRYVSFLEAEDIITVDRSHASNQVSLTALGEAAQQYVDREGNPVHPSQSRLS
GASYGHPSRSRKCSVSAQKRDRYPPAERWLAATGSASESGYVQWLGDRTGSREVEPPV
LHRRFSAAKRVDGVTFADGDILDWTDDDDAPDGDGRVSYISTFDDEALVILQWGGPVV
TLGRLCGALFSNRMLSKALNTDALGKQWNRAHDGVETFENDLHDVLIQAKQIGWLSSD
ELEDLDNWRERIGAVRSMLLSQVGDFDDLDSGLQAQLMRDLHGLLCSAMNVYDAAGLD
VTINIRLPDPDALRRNENQYEKFLDFARYTITKQAGYRDDYGVHSWYRMCIEDRPQKL
RARSEYDIDDTDPVADLLASWVFTGPGVSDLLPDVQEAVDEEATRLRERVDAGVEDAA
ILDIPMVEANSHGHIRGLVREIADRKGFYDGNRADLDRLTRCLEAALAAADRGPDPCL
VADALDSLESRDSVSDRLDVDAVEAALATLPSEAIFPTLPPAARRMLSALFASTEPLD
RQDLIEITSESSYNRHHKTLRAFFLVEDTGEGFVAHLEPWWSSTSSVSEPYHEDTPYP
GSPAGHPSHILLGPVYDSGLLDIPPDEYAELGYLDYKELLDELGLSRWRPILEAFCSD
CHEATTTSHAVDSELSYSDHSGVRIGPPSVTYDTAQVSITQTVADD"
gene complement(29352..29642)
/locus_tag="RR_RS21760"
/db_xref="GeneID:37644186"
CDS complement(29352..29642)
/locus_tag="RR_RS21760"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_004966303.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_049938435.1"
/db_xref="GeneID:37644186"
/translation="MTEPVRLRVRARRNQQGSILEWHPDDEGNGKEALASPWALICDL
GAVNRSTIVDGDLVAVVEVWPRSGDVIVLEEHARSESATERLRMQASAEVAQ"
gene complement(29837..30049)
/locus_tag="RR_RS00745"
/old_locus_tag="pNG4038"
/db_xref="GeneID:3126769"
CDS complement(29837..30049)
/locus_tag="RR_RS00745"
/old_locus_tag="pNG4038"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011222258.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011222258.1"
/db_xref="GeneID:3126769"
/translation="MARADPSPGTATETTSTETDQWRLRYMVGDLEHYTEWTTEFPTI
ENYYDQYRRGDYAHDVVIERRAVVER"
gene complement(30049..30348)
/locus_tag="RR_RS00750"
/old_locus_tag="pNG4039"
/db_xref="GeneID:3126775"
CDS complement(30049..30348)
/locus_tag="RR_RS00750"
/old_locus_tag="pNG4039"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_004966299.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011222259.1"
/db_xref="GeneID:3126775"
/translation="MTTRPTAGEIVAITTTDSEPLLLVCRQTDEHVTGILLADLATET
LQRLRASEPDTATRQQLAQAIGRTNELLSFTVPLTECALVERDSSRPDPFEGGDA"
gene complement(32537..32851)
/locus_tag="RR_RS00760"
/old_locus_tag="pNG4042"
/db_xref="GeneID:3126755"
CDS complement(32537..32851)
/locus_tag="RR_RS00760"
/old_locus_tag="pNG4042"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008313828.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="helix-turn-helix transcriptional regulator"
/protein_id="WP_011222261.1"
/db_xref="GeneID:3126755"
/translation="MTTYHDLTGFQRDLLEAIAAVEDDPYGLALKDYLDERYAGPINH
SRLYQNLDQLVDSGLVSRDELDARTNVYTLTDAGQDTLYRQAETLAGLCELPRPVTGG
AQ"
gene complement(32848..33528)
/locus_tag="RR_RS00765"
/old_locus_tag="pNG4043"
/db_xref="GeneID:3126761"
CDS complement(32848..33528)
/locus_tag="RR_RS00765"
/old_locus_tag="pNG4043"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011222262.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011222262.1"
/db_xref="GeneID:3126761"
/translation="MTAWHTCTALQRDLLKAIADHDHYDRAATADALQIAVETRREAT
LDDARVTDALAELEGDELVTTTDGTYALTDRGQDAITQAARSLAIVTGHDLVVTDGGT
TIPSHTAAATRLDTVLQAAEPALADDELERLAAVSTYLRNTDGFVVETHAEPAIRSHA
LDVIATSEDSHGASAGNVLDTLAREYGAKRALTALLDLLVQGDCYQPEPATLRRVDTD
ADEPGGDR"
gene complement(33988..34152)
/locus_tag="RR_RS22185"
/db_xref="GeneID:55596777"
CDS complement(33988..34152)
/locus_tag="RR_RS22185"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_171814222.1"
/db_xref="GeneID:55596777"
/translation="MKSHDRPFCTAKEIADEFGVSNGAILDRLHEMRDQEKVETKDVG
ACAKVWWVAG"
gene 34353..34649
/locus_tag="RR_RS00775"
/old_locus_tag="pNG4045"
/db_xref="GeneID:3126758"
CDS 34353..34649
/locus_tag="RR_RS00775"
/old_locus_tag="pNG4045"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_004966820.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011222264.1"
/db_xref="GeneID:3126758"
/translation="MATTQSNPQERTARELLTQGRPLFLGVDGEDTAHYWDSYEFAVA
VVMADGEAEKVVLAETPFETLAEWCEYTRSERGWDIGPHVGGSLVGDLVRGVEA"
gene 34646..34897
/locus_tag="RR_RS00780"
/db_xref="GeneID:25139326"
CDS 34646..34897
/locus_tag="RR_RS00780"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_005532655.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_049938439.1"
/db_xref="GeneID:25139326"
/translation="MSCTVEERKRVRRAARAIQEEVATESVDVLAPSASQYGEWTLDA
VLRDAEGVPPEVLRELALAGLTLQPTPSQAEFQHVAATV"
repeat_region 35013..36696
/inference="COORDINATES: alignment:crt:1.2"
/inference="COORDINATES: alignment:pilercr:v1.02"
/rpt_family="CRISPR"
/rpt_type=direct
/rpt_unit_range=35013..35042
/rpt_unit_seq="gtttcagacggacccttgggcggttgaagt"
gene 37302..38114
/gene="cas6"
/locus_tag="RR_RS00785"
/old_locus_tag="pNG4046"
/db_xref="GeneID:3126756"
CDS 37302..38114
/gene="cas6"
/locus_tag="RR_RS00785"
/old_locus_tag="pNG4046"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008524857.1"
/GO_function="GO:0004521 - endoribonuclease activity
[Evidence IEA]"
/GO_process="GO:0043571 - maintenance of CRISPR repeat
elements [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="CRISPR-associated endoribonuclease Cas6"
/protein_id="WP_011222265.1"
/db_xref="GeneID:3126756"
/translation="MRILARLSARTDAAYDNTYHNKLQGRIWQALEDSKYDALHDKNQ
PKPFVYSNPFPPQDMDEGDERTLLVASPEESLLAHIAEDLTHDRELNIGEMPFHVDKV
SPLAPDVGEPGTSGTIETGTGLLVRIPPWRFDDYGMDVNHDQAEFWRPEHTLEPFRTQ
LEANLDKKHRLYMPDYLAGPSDVDGDLFDSYELIKTFAIPVTPTTGRTEEWVLSKWRF
DYTVRDDDHRRHLNLALDVGLGERNSLGFGFINITDQTRPDETELEGENAFP"
gene 38101..40233
/gene="cas8b"
/locus_tag="RR_RS00790"
/old_locus_tag="pNG4047"
/db_xref="GeneID:3126751"
CDS 38101..40233
/gene="cas8b"
/locus_tag="RR_RS00790"
/old_locus_tag="pNG4047"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015789204.1"
/GO_function="GO:0003674 - molecular_function [Evidence
IEA]"
/GO_process="GO:0043571 - maintenance of CRISPR repeat
elements [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type I-B CRISPR-associated protein Cas8b/Csh1"
/protein_id="WP_011222266.1"
/db_xref="GeneID:3126751"
/translation="MLSPEQFRERYADTLADELPDGPVTSLRSLQYLYGKLYTLATAG
GGDYAAYLTPDEAGDLVDSEDSLIVVRVDLSGNEPQLATDDRGPVWVTKYTDDRVEKV
AHCKYPAARGIDHSVTHQAGRNSGPEKLARYAKERLTKWAKDEVVQEAATEHEDGYIV
EALAELSEDEATLDAIEEAVKRELAGESTTALLTVQVKVDPDGDYLWPAERDVFLAAM
RRRKLSKLVTKNKADDSSGQATDIVTGASTRTVGTSEDPQNYYLGKQLEKFPGLDIEE
AWRTHPISEDAAVTVMNAGTFVEACTYRTFGTKVYCLPYVWGTISTSDAFDLYKLLYD
ATTEDDGMTPIERQYENRNTLFGDAQLRFYVSAVMPHQMSRYDVFGETLNGRLLYPKE
LATKHNQLVQQSAAFHSGAEWTPPMPTHPNWDLLAGSDEQLHAVSTGWYFAQTFAQRD
DDDADADDPRIEALVSVLSGDAISVETLLEEYVARIITEQTDDDVEGFPSFRVASQFA
QLCALATDKLDLLTSDDAAKEPITREPTYDTQTMEPPTDILAADGGHPAAAKLESFIE
DTPALAPDEDAPHNDQRRGAFLLGALVGEIGSYQEYDQDRSTTLVDQFPVKSITKSRI
KKVTQETIGKTLTYTRQEKKAGQSYPGTKAEHVVERLRETILKPDPDEWDLDTDDLRF
YYALGVTYGMNDHPEWDSTAIDDTEEDI"
gene 40235..41308
/gene="cas7b"
/locus_tag="RR_RS00795"
/old_locus_tag="pNG4049"
/db_xref="GeneID:3126759"
CDS 40235..41308
/gene="cas7b"
/locus_tag="RR_RS00795"
/old_locus_tag="pNG4049"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008164963.1"
/GO_function="GO:0003674 - molecular_function [Evidence
IEA]"
/GO_process="GO:0043571 - maintenance of CRISPR repeat
elements [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type I-B CRISPR-associated protein Cas7/Csh2"
/protein_id="WP_011222267.1"
/db_xref="GeneID:3126759"
/translation="MTDTTDIAQHRSEIVFLYDAVDANPNGNPLSSANRPRIDPQTQQ
AIVTDVRLKRYLRDQLDDDGHGVYIRNVQEEGEQYTRADLLEDRLKSVDYDSYDLDDD
EEAEQFREDVFGEYLRKSADVRYFGATMSVDTDDVYAKHLPDHFTGPVQFSPGKTMHA
VNENEEYDSLTSVIATQEGKEQGGFDLDDHRIQYGLIRFHGLVDEHGAADTRLTQEDV
ERLDTLCWRAIKNQTISRSKVGQEPRLYCRVEYADESFHLGGLDKDLRLDEEASKDDE
DLRNVRDLAVEIDDFVDRLDGAGAQVERIRVVASDVLQFTHEGEPGGPELLYNALRDA
VGADRVEIIDVYDEHLETLPAAE"
gene 41311..42108
/gene="cas5b"
/locus_tag="RR_RS00800"
/old_locus_tag="pNG4050"
/db_xref="GeneID:3126771"
CDS 41311..42108
/gene="cas5b"
/locus_tag="RR_RS00800"
/old_locus_tag="pNG4050"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_004064674.1"
/GO_function="GO:0003674 - molecular_function [Evidence
IEA]"
/GO_process="GO:0043571 - maintenance of CRISPR repeat
elements [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type I-B CRISPR-associated protein Cas5b"
/protein_id="WP_011222268.1"
/db_xref="GeneID:3126771"
/translation="MSQESLDEWSETDSDWSPERCLSLTVRGPWGHFRRVEGNVVKQT
YRVMPRTTVAGLIAAVLGIERDGYYDLFAPGRSAIAIEPVRGLRTLNMPVNALSTAAD
NLKSLNSRGKLSVKLPDPMDLRQQHNYEVLVDPAYRIDVALADSETYRELRQTLEAGR
SHYVPSLGLSEHLANISFHGEFTIEEGPDDTVVSVDSTLPNAVDDVVLDSDTRCGIEE
SPAFMTTDAGGRTTTAFTTYAYNPDAEPLRVRNMQPSRVDGRTVVFV"
gene 42110..44719
/locus_tag="RR_RS00805"
/old_locus_tag="pNG4051"
/db_xref="GeneID:3126766"
CDS 42110..44719
/locus_tag="RR_RS00805"
/old_locus_tag="pNG4051"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_020220936.1"
/GO_function="GO:0004521 - endoribonuclease activity
[Evidence IEA]"
/GO_process="GO:0043571 - maintenance of CRISPR repeat
elements [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="CRISPR-associated endonuclease Cas3''"
/protein_id="WP_049938441.1"
/db_xref="GeneID:3126766"
/translation="MTTIYSHPPENGSEGVVLDDHLNDVAARVEYVVPPGARTPAGEP
LRPVVKTLGYVHDLGKATTFFQDYLLDDRQPDNELLRHHAPLGAFAAYFALDARGFDT
ETCLAGFVAVAKHHGSLPDITDYIHTRAHRREGVEPRERNSAERRQNAVAKQIKNIDD
NARELVSTVFEAATAGAEEWASFRDGFGELLDDIADTVAATGTTTGINRDALSSSCYG
LVIQCWGSLVLADKTSAAGARNVAETYTEDQPSLDRLNDHIADIEASVSADPDGSQSE
RLNHLRSMAREDVLDNAADLAKAGGGVATLTLPTGMGKTLTGLSAALDIRDNLGGKRV
IYALPFTSVIDQVVDDVSGIYDTDDHPHLLTAHHHLADASIEDNADADEADRSDDVAG
MLGESWRAGLTVTTFVQLFESLAGPGNRQSMKLPALRNSVVVLDEPQSLPLDWWKIVP
RLVKMLTEQFGATVIAMTATQPKLFPESPELVEGPEQYFEEVSRVSYHLDASTDRYIE
ARNEGDPKSYQDAATNLSEQLTAGTSALAVCNTIDSARHLTERLVENAPDAVDVAEQY
DDVLRKKELTTGEDVAKRVQSVGDRAILHLSTRLRPADRLTLVDAAKELTEAGHPVAV
VSTQLIEAGVDISFDRVYRDLAPIDSVVQAAGRCNRSFERDRGHVTVWWLAAPPDVEK
TPAEAVYNRGTSLLPVAADTLASVRSDDGELTERAVARDAVERYYDRLHDDKCVGKQA
YADYVDNARADKLSDLSLIDQRPSVDVVICRTDADHEIVESVRNAANAYDFDAFSDAI
DETKSLRISVPVYPGDDETKEALNSLVPLVKNERFNRATGVRVLDVRRFENHFDQRTG
FIVPDSTVAHQFI"
gene 44716..45288
/locus_tag="RR_RS00810"
/old_locus_tag="pNG4052"
/db_xref="GeneID:3126753"
CDS 44716..45288
/locus_tag="RR_RS00810"
/old_locus_tag="pNG4052"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015789200.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="CRISPR-associated protein Cas4"
/protein_id="WP_011222270.1"
/db_xref="GeneID:3126753"
/translation="MTESRTDNSEDPVEKLLRSARDEAVNDPFHVTGVMMQYYEVCER
ELWFASRHLEIDRDNTAVVRGTQVDESAYDDKRRNVSIDGTIAIDVLDDGRVMEVKPS
SSLIKPAKLQLLYYLWYLDQVVGVEREGVLAHPTERKRETVALTDENTRWVEEAIRGI
YDVTTSDSPPPAEEKPFCESCAYHDFCWSC"
gene 45291..46283
/gene="cas1b"
/locus_tag="RR_RS00815"
/old_locus_tag="pNG4053"
/db_xref="GeneID:3126772"
CDS 45291..46283
/gene="cas1b"
/locus_tag="RR_RS00815"
/old_locus_tag="pNG4053"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008324573.1"
/GO_function="GO:0004520 - endodeoxyribonuclease activity
[Evidence IEA]"
/GO_process="GO:0043571 - maintenance of CRISPR repeat
elements [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type I-B CRISPR-associated endonuclease Cas1b"
/protein_id="WP_011222271.1"
/db_xref="GeneID:3126772"
/translation="MNDNYHVFTDGRLERHNDTIRLVTEDGEKKYLPIENAEALFLHG
QIDYNTRLVSFLNDVGVAIHVFGWNDYYAGSIMPERGQTSGQTLVEQVRAYDDSTRRR
AIARQFIEGSIHNMRANVKYYDDRGYDFDAIIDRLEAQAESLSDEMDTNELMGVEATA
RKAYYSIFDDVLPDGFDFGGRQYNPPDNEVNSLISFGNSLVYANVVSAIRATALDPAV
SFLHEPGERRYSLALDIADLFKPLLADRIIFRVVNRNQLQLDDFESDLNGCLLNENGR
KTFSKAFEESLEQTVDHPRLNRKVSYQYLLRVEVYKLKKHLLTGEEYVPFKRWW"
gene 46286..46549
/gene="cas2"
/locus_tag="RR_RS00820"
/old_locus_tag="pNG4054"
/db_xref="GeneID:3126770"
CDS 46286..46549
/gene="cas2"
/locus_tag="RR_RS00820"
/old_locus_tag="pNG4054"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_006648201.1"
/GO_function="GO:0004521 - endoribonuclease activity
[Evidence IEA]"
/GO_process="GO:0043571 - maintenance of CRISPR repeat
elements [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="CRISPR-associated endonuclease Cas2"
/protein_id="WP_011222272.1"
/db_xref="GeneID:3126770"
/translation="MVYAIIVYDVQADRTPKFLKYLRRYLTHVQNSVFEGELTEGTLV
EVKETLQSMLEEEESVMVYRMDSGSYVERSVYGDDPMDDQQFL"
repeat_region 46654..50046
/inference="COORDINATES: alignment:crt:1.2"
/inference="COORDINATES: alignment:pilercr:v1.02"
/rpt_family="CRISPR"
/rpt_type=direct
/rpt_unit_range=46654..46683
/rpt_unit_seq="gttacagacggaccctcgtggggttgaagc"
CONTIG join(AY596293.1:1..50060)
//
