LOCUS NC_007351 38454 bp DNA circular CON 24-DEC-2022
DEFINITION Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC
7292 plasmid pSSP1, complete sequence.
ACCESSION NC_007351
VERSION NC_007351.1
DBLINK BioProject: PRJNA224116
BioSample: SAMD00061076
Assembly: GCF_000010125.1
KEYWORDS RefSeq.
SOURCE Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC
7292
ORGANISM Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC
7292
Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
Staphylococcus.
REFERENCE 1
AUTHORS Kuroda,M., Yamashita,A., Hirakawa,H., Kumano,M., Morikawa,K.,
Higashide,M., Maruyama,A., Inose,Y., Matoba,K., Toh,H., Kuhara,S.,
Hattori,M. and Ohta,T.
TITLE Whole genome sequence of Staphylococcus saprophyticus reveals the
pathogenesis of uncomplicated urinary tract infection
JOURNAL Proc Natl Acad Sci U S A 102 (37), 13272-13277 (2005)
PUBMED 16135568
REFERENCE 2 (bases 1 to 38454)
AUTHORS Hattori,M., Yamashita,A., Toh,H., Oshima,K. and Shiba,T.
TITLE Direct Submission
JOURNAL Submitted (11-MAR-2005) Contact:Masahira Hattori Graduate School of
Frontier Sciences, University of Tokyo; 5-1-5 Kashiwanoha, Kashiwa,
Chiba 277-8561, Japan
COMMENT REFSEQ INFORMATION: The reference sequence is identical to
AP008935.1.
This work was done in collaboration with Makoto Kuroda, Miyuki
Kumano, Kazuya Morikawa, Masato Higashide, Atsushi Maruyama, Yumiko
Inoue, Kimio Matoba, Toshiko Ohta (University of Tsukuba), Hideki
Hirakawa, Satoru Kuhara (Kyushu University), and supported by the
Research for the Future Program of the Japan Society for the
Promotion of Science.
The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Date :: 12/24/2022 01:05:49
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 6.4
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA
Genes (total) :: 2,538
CDSs (total) :: 2,455
Genes (coding) :: 2,389
CDSs (with protein) :: 2,389
Genes (RNA) :: 83
rRNAs :: 7, 6, 6 (5S, 16S, 23S)
complete rRNAs :: 7, 6, 6 (5S, 16S, 23S)
tRNAs :: 60
ncRNAs :: 4
Pseudo Genes (total) :: 66
CDSs (without protein) :: 66
Pseudo Genes (ambiguous residues) :: 0 of 66
Pseudo Genes (frameshifted) :: 36 of 66
Pseudo Genes (incomplete) :: 24 of 66
Pseudo Genes (internal stop) :: 17 of 66
Pseudo Genes (multiple problems) :: 10 of 66
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..38454
/organism="Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305 = NCTC 7292"
/mol_type="genomic DNA"
/strain="ATCC 15305"
/sub_species="saprophyticus"
/type_material="type strain of Staphylococcus
saprophyticus"
/db_xref="taxon:342451"
/plasmid="pSSP1"
gene complement(74..>376)
/locus_tag="SSP_RS12275"
/old_locus_tag="SSPP101"
/pseudo
CDS complement(74..>376)
/locus_tag="SSP_RS12275"
/old_locus_tag="SSPP101"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019834869.1"
/GO_function="GO:0004590 - orotidine-5'-phosphate
decarboxylase activity [Evidence IEA]"
/GO_process="GO:0006207 - 'de novo' pyrimidine nucleobase
biosynthetic process [Evidence IEA]"
/note="incomplete; partial in the middle of a contig;
missing N-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="orotidine 5'-phosphate decarboxylase"
gene <386..586
/locus_tag="SSP_RS12855"
/pseudo
CDS <386..586
/locus_tag="SSP_RS12855"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001798878.1"
/note="internal stop; incomplete; partial in the middle of
a contig; missing N-terminus; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="winged helix-turn-helix transcriptional
regulator"
gene complement(791..1246)
/locus_tag="SSP_RS12280"
/old_locus_tag="SSPP102"
CDS complement(791..1246)
/locus_tag="SSP_RS12280"
/old_locus_tag="SSPP102"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_002483600.1"
/GO_function="GO:0003700 - DNA-binding transcription
factor activity [Evidence IEA]"
/GO_process="GO:0006355 - regulation of DNA-templated
transcription [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="MarR family transcriptional regulator"
/protein_id="WP_011304031.1"
/translation="MEHKEGNLEIIINQFYDATANINKAITNMVKELEPGRYLSYEQI
ETMYFIQHNEKVSINDLANKQRTYKTAASKRVKKLESKGYVQRVYSNDKRTKLLSLTH
NGERLLKEMKINLTKEIKLLLLSCFVREDFEKFMYQLMNFEKTFLKKYY"
gene complement(1332..4181)
/locus_tag="SSP_RS12285"
/old_locus_tag="SSPP103"
CDS complement(1332..4181)
/locus_tag="SSP_RS12285"
/old_locus_tag="SSPP103"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019834639.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="YhgE/Pip domain-containing protein"
/protein_id="WP_011304032.1"
/translation="MKNAIKLFVMDLKKIAKTPAVLVILGGLALLPSFYAWFNLEATW
DPYGNTKNIKVAVVNEDKGDTVKDKNVNVGNKITNKLKKDDNFDWQFVSRKKADHDLK
MGDYYAAIYIPEKFTHQITGTLRKNPQQADVEYKVNQKLNAIAPKMTNAGTSAIVQKA
NEQFNETVTKALLDEANRLGVKLEEEIPTINKIEDAVSKANDSIPKINDFADKIIYLD
ENQDEIDNYADEFRALGNHKGEVIDAADKLNQVNAAIPTLNERAKLILALNDYMPNIE
NALNVASNDVPEAFPKINRGVDLASAGVDAGLQGLNEAQGYLPAVQQRVEGYQEVVDN
AQEANQNANNRLQENVETEQQSSKGSDSYSNIKTSQISNSNSDNAGNNQNGTAISSED
VSAMESSLSKSLLSLSNYTDKQAESSQEDINALKNVTYGIISTDKPKDFKETLDNIKS
RLEVTSKSNQKFIDILSELEDREKVDLSDEIKELESANNRINNLIKTQNQLSEALSNG
SSGKEEAVELLKEIPRVNSSLDDLRNYIKSELNQKLLDVSNDVMSLLDDGDIKLSTVQ
SKLNTIDQVINSGESILTTGKDRVETIQSALPVIEQRYMDAMSIAQNYYPQFKQSVSN
AASFIENDLPGLEQQLSDTTATVNNTIPTLFNRYDNLVDILDTNQPRAKESLHNLADF
ARNQLPDVEKDLAKANKLFDEIEDDDAVDKMVDLLKNDLKKQANVIANPINIDQKDIF
PVKDYGSASTPFYTALAIWVGALLLVSLLTTDNKHKSLEPHLTTREIYLGKSGLFYTL
GIIQALIVSIGDMVILKAQVESVVWFIAISVFSSLVFISIVYTLVSLLGNPGKAIAII
FLVLQIAGGGGTFPIQVTPEFFQVIHPYLPFSYSIDALREAVGGPVPEILTKKLVILS
LFGIGFLLIGVIFKPITDPLMRKATEKAEESDVME"
gene 4400..6517
/locus_tag="SSP_RS12290"
/old_locus_tag="SSPP104"
CDS 4400..6517
/locus_tag="SSP_RS12290"
/old_locus_tag="SSPP104"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011304033.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="amidase domain-containing protein"
/protein_id="WP_011304033.1"
/translation="MKQQKLLVCLLSTSLLIPSFSINDVSAESLEKSATTSESNDVYK
EKDEEQAKQSHSSKNGNDEKNKASDEKENSERKSKLNSTKDERTTEDINNKRHKTSDN
KSSNEKIPSSFENSFNDSSSYDSLNVFKPEPFRSDKDGLSELLNQLFSNNKMKQTSTI
ENNDVQNEKNDSHNDNTSIDQINPNTTYSDDSDESNTNNLEKNSDKGSLQDDIDDVQS
SEKSENDDIDNKSESNKLPVDKNQKKDDGESKQSSQQDQSYEEANNDADNLDNKDNDT
PATENDNANSDNENADKSDTKSDDKVLDAILDEYSEDAKNNKKQYDAQKDDLSNGNSK
SKKNNSEKQASNTNANPQLPSESQLAKKEKPAQSFENDINQSNIRSTATFQQLPNLSD
DNNNSNDITITESKNTRDFIKTVAQDAHDIGQDEDIYASVMIAQAILESDSGTSDLAS
SPHFNLFGIKGAYEGQSATFNTLEDNGNHTFQISANFRSYPSKKESLEDYANLIKHGI
DGNQDIYKPTWKSEAYSYRSATMHLATTYATDSQYADKLNSIINHYDLTQFDNKKMPD
LDNYKANKDDYDSAFKPFSETTNDSPYPHGQCTWYVYNRMAQFDKYVSGDLGDARNWN
NRAERKDYAVSSTPKAHTAVVFEAGQQGADQIYGHVAFVEKVNDDGSIVISESNIKGL
GIVSYRTIDADAATELSYITGNN"
gene complement(6683..8539)
/locus_tag="SSP_RS12295"
/old_locus_tag="SSPP105"
CDS complement(6683..8539)
/locus_tag="SSP_RS12295"
/old_locus_tag="SSPP105"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_002511755.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="GA module-containing protein"
/protein_id="WP_226956096.1"
/translation="MTSTPSVEAKDKADLNIETHSNSENTLEKRIQEGKEKIDKLKNI
KDSQKDASIKEITKAKSTEEVEAILKKAKKVDNKIIEQNRVQSHLIENDKKEVSEDKK
SVKSELDSKKNIVSSVKEKSNHIEEQDSIDLFDQEDLQDNTFDANLNQRDTKQDISHL
VDMGKLNEESKDIADMNDSEENKNTASEKDEGAVKENNQDGLAFKDTSNTKSNQMQQS
DEIKKDIDKVTTNHSKVKDNLDYYVENKENNLKILDSKLSERDSISAKNKEKLKKEIE
KTQQSLKKQNDVVLNHLQSVNNKEQAVKDIVSGTFDEKSAQSILERIDTKGKTDQQIA
SQVVSELDNLSTTTSDDILKSMFDKTSDKQELIKTILLTKFDHIDTSKIVDEIMHKNP
SNEQIVALIKHHFGDNVTSDDILENILDQSHDKRKALETMLATKLNDAKAKALADVIA
KKEDSKHNLLNLMKSGINNELNDLLKADKDISKFKDDMHGLFEPLKYTPSLSNKFDGS
LLDRAEQMRKLSGNSKLLGTPSLFDDLFNRNSILDGIKDISNPSPGRALSLGDSSGSF
LSGLFDNNGDFSLPDTGTVVKKSTIPLGILLFIIGGGLIWFIKRNKSKNCKY"
gene <8786..9042
/locus_tag="SSP_RS12860"
/old_locus_tag="SSPP107"
/pseudo
CDS <8786..9042
/locus_tag="SSP_RS12860"
/old_locus_tag="SSPP107"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_002432347.1"
/note="frameshifted; incomplete; partial in the middle of
a contig; missing N-terminus; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="butanediol dehydrogenase"
gene complement(9167..9541)
/locus_tag="SSP_RS12300"
/old_locus_tag="SSPP108"
CDS complement(9167..9541)
/locus_tag="SSP_RS12300"
/old_locus_tag="SSPP108"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_002508680.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011304037.1"
/translation="MINEMEELNQVKLDLKKLRNKFPNMYEKLEYIASLTRQLSIHYK
YLGLLMFSDNREIIQNKRPTLIRESVLKLYEQEVKKVKKDSNFVIFKDMMLKFQNVNY
SQIFLIILGAEPSFVFKNTIIK"
gene complement(9549..10073)
/locus_tag="SSP_RS12305"
/old_locus_tag="SSPP109"
CDS complement(9549..10073)
/locus_tag="SSP_RS12305"
/old_locus_tag="SSPP109"
/EC_number="3.1.2.20"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011304038.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="acyl-CoA thioesterase"
/protein_id="WP_011304038.1"
/translation="MENYKFPSDSKIVSTDQVLINDLNNYNTLFGGVLMKKIDNNATL
SARRHARVKECVTASTDSVEFLYPITQSDSVCIESYVVYTGEKSMEIFCKVISEDMIT
AERKIAAVAFLTFVALDEKKKPIKVPKISPQSKEEKLLFMDGEERAKMRKIKRSQTKN
IIESLDINKPWELE"
gene complement(10183..11070)
/locus_tag="SSP_RS12310"
/old_locus_tag="SSPP110"
CDS complement(10183..11070)
/locus_tag="SSP_RS12310"
/old_locus_tag="SSPP110"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019467786.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="WP_011304039.1"
/translation="MELRHMQYFVEVVKQKSMTKAASNLFITQPTISNTIKLLEEELD
VNLFNRYKNQIYLTDAGEAFFFQCKEMLKMYDNIPNELSNLLELKKGHLKIGIPTIIN
IRRLIGLISEFHEMYPNITFQLFENGSKKIENDVYYGDLDMGITVLPTNNKNFDIFSF
LEEKLKLVVHKNHELSKKTKIDIEDLQEQEFILFNSDFYLNDKIKNTCRNYGFNPNII
FETTQWSFIEEMLLNNLGICILPEGILGLLDNNLQAIDINEPSMKWELGIIWRKDIIV
DSLTKNWIKFLQENFLINY"
gene complement(11119..11670)
/locus_tag="SSP_RS12315"
/old_locus_tag="SSPP111"
CDS complement(11119..11670)
/locus_tag="SSP_RS12315"
/old_locus_tag="SSPP111"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_002508682.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="recombinase family protein"
/protein_id="WP_011304040.1"
/translation="MAKIGYARVSTQDQSLDGQIDTLKDYGCERIFSEKVSGRKTKRT
ELDKCLDYLREGDILVIYKLDRLGRTTKQLIDLSQWLDENGIDLHIIDMNVSTKDAMG
KMFFTMMSAFAELEANLLSERTKKGLEAARARGRKGGRPSLPDYKKREIKFLYDEQKL
TGEEIAKQTDVSRSTVYRIIKNN"
gene complement(11897..12109)
/locus_tag="SSP_RS12320"
/old_locus_tag="SSPP112"
CDS complement(11897..12109)
/locus_tag="SSP_RS12320"
/old_locus_tag="SSPP112"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_002508713.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_002508713.1"
/translation="MKVKDQQPYILDNELGSREEVEIDEQRIKELEEYDEQEDKNPNN
KIIIFTTILIFILTIILSVIIQTNKK"
gene complement(12188..12487)
/locus_tag="SSP_RS12325"
/old_locus_tag="SSPP113"
CDS complement(12188..12487)
/locus_tag="SSP_RS12325"
/old_locus_tag="SSPP113"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_002508712.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_002508712.1"
/translation="MVNSDKKEIEISKTNETRSNEISKMIEEGGLGADQYYTIDKQQP
NQKILIENIDQFKDEISQKDNDDLIDLLILNAQENINSKGNHALIIIKKELLSRM"
gene <12773..12907
/locus_tag="SSP_RS12865"
/pseudo
CDS <12773..12907
/locus_tag="SSP_RS12865"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011251335.1"
/GO_function="GO:0000150 - DNA strand exchange activity
[Evidence IEA]"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0006310 - DNA recombination [Evidence
IEA]"
/note="incomplete; partial in the middle of a contig;
missing N-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="helix-turn-helix domain-containing protein"
gene complement(13214..13609)
/gene="arsC"
/locus_tag="SSP_RS12330"
/old_locus_tag="SSPP114"
CDS complement(13214..13609)
/gene="arsC"
/locus_tag="SSP_RS12330"
/old_locus_tag="SSPP114"
/EC_number="1.20.4.4"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_002509695.1"
/GO_function="GO:0030612 - arsenate reductase
(thioredoxin) activity [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="arsenate reductase (thioredoxin)"
/protein_id="WP_002509695.1"
/translation="MDKKTIYFICTGNSCRSQMAEGWGREILGEEWNVYSAGIETHGV
NPKAIEAMKEVDIDISNHTSDLIDNKILRQSDLVVTLCSDADENCPVIPPNVKKEHWG
FDDPAGKSWSEFQRVRDEIGQKIKQFYDN"
gene complement(13627..14919)
/gene="arsB"
/locus_tag="SSP_RS12335"
/old_locus_tag="SSPP115"
CDS complement(13627..14919)
/gene="arsB"
/locus_tag="SSP_RS12335"
/old_locus_tag="SSPP115"
/inference="COORDINATES: similar to AA
sequence:RefSeq:YP_500394.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="arsenite efflux transporter membrane subunit
ArsB"
/protein_id="WP_077460980.1"
/translation="MMTILAITIFVLTLIFVIWQPKGLDIGITALIGAVVAIITGVVS
FSDVLEVTGIVWNATLTFVAVILISLILDEIGFFEWSAIHMVRASKGSGLKMFIFIML
LGSVVAAFFANDGAALILTPIVLAMVRSLGFDKKAIFPFIIASGFIADTTSLPLIVSN
LVNIVSADYFDIGFVEYFSKMIIPNIFSLIASILVLWLYFRKSIPGKFDAVNIREPKE
AIKDKKLFNISWIVLTVLLVGYLISEFINIPVSIIAGIIALIFVLLARKSKAVHTKQV
IKGAPWNIVLFSIGMYLVVFGLKNVGITTLLGDVLTNISSYGLFSSIMGMGFVAAFLS
SIMNNMPTVLIDAIAIGQSSATGILKEGMIYANIIGSDLGPKITPIGSLATLLWLHVL
TQKGVKISWGTYFKTGIIITIPVLFVTLLGLYLTLIIF"
gene complement(14919..15233)
/locus_tag="SSP_RS12340"
/old_locus_tag="SSPP116"
CDS complement(14919..15233)
/locus_tag="SSP_RS12340"
/old_locus_tag="SSPP116"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_002509693.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="metalloregulator ArsR/SmtB family transcription
factor"
/protein_id="WP_002509693.1"
/translation="MNYNEISQYLKVIADSSRLEILDLLSCGELCACDLLEHFSFSQP
TLSHHMKVLKDNNLITSRKDGNKNLYKLNHDVLDDVTSRLTLLSSSTVPCICETVEKG
EC"
gene complement(15230..16894)
/locus_tag="SSP_RS12345"
/old_locus_tag="SSPP117"
CDS complement(15230..16894)
/locus_tag="SSP_RS12345"
/old_locus_tag="SSPP117"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_002488499.1"
/GO_function="GO:0016491 - oxidoreductase activity
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="FAD-dependent oxidoreductase"
/protein_id="WP_011304042.1"
/translation="MKKIVIIGSVAAGTSVAAKARRNSEDVEITVFDKDSDISYSVCG
IPYYIGGNVSDIDELTPRNAKWFKERFNIDIYTEYEVNKINDSDQTITVTNLVNDEKM
IQKYDELVLATGSSPKELPQLNSEEYNNVFKVKNINDAKAIYNYINDHDVQNITIVGG
GFIGLEMLEQLSNYNTSIVQRNTFMPHLDYDMSFMIQEYIEDKANVYTYNEIDIIDYD
ENHTINRVSLKTGELIDTDLIIIGIGVTPNTKLAKEIGINIGESGAIQTNKYLETNIP
HIYAIGDAAESYNLITGNPIYRPLGSTANKMGRILGDRLTGGNLEHKGILGTGIVRIF
DMTIAQTGLTEKEAVELEIDIDVLHNVKPNRPEYMQGQEMVIKAIFDKNNSKLLGAQI
VGYEGVDKRIDVLATAITFGAKAEDLFHLDLAYAPPFSTTKDPVIYTGMIGHNITRGR
KIITPEEVVKQKNDLLILDVRSPKQFEVDHVDGAINVPLKTLRSYAKTLDENQTIVTY
CNKGTTGNAAQNVLINLGFKQVYNLSGGNKNYQRYKRFQVEREKKN"
gene complement(16891..18621)
/gene="arsA"
/locus_tag="SSP_RS12350"
/old_locus_tag="SSPP118"
CDS complement(16891..18621)
/gene="arsA"
/locus_tag="SSP_RS12350"
/old_locus_tag="SSPP118"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_002469339.1"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/GO_function="GO:0015446 - ATPase-coupled arsenite
transmembrane transporter activity [Evidence IEA]"
/GO_function="GO:0016887 - ATP hydrolysis activity
[Evidence IEA]"
/GO_process="GO:0071722 - detoxification of
arsenic-containing substance [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="arsenical pump-driving ATPase"
/protein_id="WP_041785003.1"
/translation="MEMDAVKYLNKLNLDNVELTKYLFFTGKGGVGKTTISSSIALNL
AENGKKVALVSTDPASNLQDVFQMELSNKLTKYQPIPNLSIANFDPIAAADDYKAQSI
EPYEGILPEDVLSEMKEQLSGSCTVEVAAFNEFTNFLSDKTLEQEFDFIIFDTAPTGH
TLRMLELPSAWTDYLNTTSNDASCLGQLSGLNENRGKYNSALEKLRNQDDTTMMLVAK
PSHSSIYEIQRAQQELQQLSISKFKVVINNYIEESHGLISSQMKSEQDKNINHFTEWL
NNNHAYYVPYKKQKEEGIESLTNLLNDDNLIENDDFIVEDHPQFNKLTDEIENSKVQY
LFTMGKGGVGKTTVATQLATALSNKGHRVLLATTDPTKEINVETTSNLNTAYIDEEQA
LEKYKKEVLATVNDDTPQDDIDYIMEDLKSPCTEEIAFFKAFSDIMENQEDMDYVIVD
TAPTGHTLLLLDSSENHHKELKKKSTQTTSNVETLLPKIQNQDLTQMIIVTLAEKTPY
LESKRLVEDLNRADIGHNWWVVNQSLVTLNQRDDLFSNKKEDESIWINKIKNESLNNY
FVIPYGGLEY"
gene complement(18602..18949)
/gene="arsD"
/locus_tag="SSP_RS12355"
/old_locus_tag="SSPP119"
CDS complement(18602..18949)
/gene="arsD"
/locus_tag="SSP_RS12355"
/old_locus_tag="SSPP119"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_002474929.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="arsenite efflux transporter metallochaperone
ArsD"
/protein_id="WP_011304044.1"
/translation="MLNIEIYEEAMCCSTGVCGPEPDETLIKTNQINEYLKQNQIEVQ
RYNMSNNPNEFIKNKEAIRLIQEKGNEVLPITFIEGNIAKTGTYITQEEADEIITVNQ
MRNGGCCDGDGCC"
gene 19234..19428
/locus_tag="SSP_RS12360"
/old_locus_tag="SSPP120"
CDS 19234..19428
/locus_tag="SSP_RS12360"
/old_locus_tag="SSPP120"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_002454594.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_002509689.1"
/translation="MRVNHASTLSVGYFVSYLNLVMVSREVTLKEATIYMEKEFFKGN
IHQYGESTENNYKQAIQELK"
gene 19478..19798
/locus_tag="SSP_RS12365"
/old_locus_tag="SSPP121"
CDS 19478..19798
/locus_tag="SSP_RS12365"
/old_locus_tag="SSPP121"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_002449352.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="metalloregulator ArsR/SmtB family transcription
factor"
/protein_id="WP_011304045.1"
/translation="MEVIKAKTDMNEDQQLDFYENMFNALADKNRLKILNQISQSPNK
SLCVCDLEELLDLKQSKISYHLKKLVSAQILIPEKYGTWNYYKINEAQIQVVLTEDTC
CKIL"
gene 19889..20773
/locus_tag="SSP_RS12370"
/old_locus_tag="SSPP122"
CDS 19889..20773
/locus_tag="SSP_RS12370"
/old_locus_tag="SSPP122"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_017175597.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="permease"
/protein_id="WP_011304046.1"
/translation="MLDSSIEFIKTFLMLFFELLVLFIVVSFIVSIIQQIVSEEKIKH
FLSKPNQVINYILGMIFGAITPFCSCSTIPILAGLLNSKVPFGPAMSFLIASPLMNPL
MIFMLWILLGWKVAVVYFVVLAIFSILTGLVFSKVNLAKSYKGVNVKGDGFFTNKSGS
RVKQALNDAWAFLYPMLPYLIIGVFIGAFIYGFIPESFITQYASGDSIISVIIASVIG
IPMYIRPETMLPIAEALVSKGMSLGTVVALIIGGAGASIPEVVLLSKLFKKKFVISFV
IAILVVAIATGLIVNLII"
gene 20787..20921
/locus_tag="SSP_RS12375"
CDS 20787..20921
/locus_tag="SSP_RS12375"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_020361277.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_002509686.1"
/translation="MGIKDALKKLKPQEQSCCSVEIEEKTDKKDENNEKKENGNKNCC
"
gene complement(21057..21257)
/locus_tag="SSP_RS12385"
/old_locus_tag="SSPP123"
CDS complement(21057..21257)
/locus_tag="SSP_RS12385"
/old_locus_tag="SSPP123"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_002448025.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_002448025.1"
/translation="MAGFLDNIDTSEVKYTENYRPISKSTTMRVDTDIKKRLNQMALD
KDTSIKSIIDKVLEEFLENNKY"
gene complement(21263..22057)
/locus_tag="SSP_RS12390"
/old_locus_tag="SSPP124"
CDS complement(21263..22057)
/locus_tag="SSP_RS12390"
/old_locus_tag="SSPP124"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_020366803.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ParA family protein"
/protein_id="WP_002448023.1"
/translation="MNIITVGNFKGGVGKTTVSTLLSYIASENYNKKVLLIDFDPQGN
ATQIMKRTYPEFKEESLSFINMLKSGNIDESIIRLTSNLSLLPADSSLANLSDIISKT
DILKKRYILKNVVEKIEKIYDFDYVFIDVPPTINSDFTNNAVYASNYILMVFQTQQSA
YESSLSFVNFLRDRKKESDLPFELVGAVPVLIKKNGRVDKQILEMSKSAFSEALFEHQ
IYQRERIKKFAADGIKDKDMHDKKVIHMFNKVYEELVSRIKLIEEE"
gene 22814..24250
/locus_tag="SSP_RS12395"
/old_locus_tag="SSPP125"
CDS 22814..24250
/locus_tag="SSP_RS12395"
/old_locus_tag="SSPP125"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_002508707.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="replication initiator protein A"
/protein_id="WP_231844715.1"
/translation="MFGNKTLAHVYLISNLYLYYIMNDYLVQVLKLLYERKIYKSVLL
PLTNLKFGKRFFIMTNEENQKFTKLHKFLFTDNKFKAMRAKSKLLYAIITERQSLTIA
YAKNNQDQSQFLDENKRLFSIYSNSDLKGMLHVSEPTIINLKKELIEYGLLEEIRVPT
SNNRLYPKKPYDKYYYLNDIDEFYRLPYALFDNPFYNKLSPDAIITYAIYLSRYEYSV
FKDIFYDKTHNIYCVMPNQEIAKFLNINRKKVARLKNELIAYGLIEVKPSKRADKLYV
NPPKQRNDNKLKKWDIANLKNGTLQTKDMGHCKLKKWDASYTDFSNTNISVIDSNDMN
DMNDIREANIEDTKPNQPNHTDHLQKQSDEEALKHLELQEMPEDTKRYMNNFSAKEIQ
IIKSVILKAKRSFNDLYGEVYMLEDMDDELFTVLKRFKGIMVKKQEKLENMQGYLMRS
ILSELEEMRSTNMRRKNFENSPLNVFKS"
gene 24270..24893
/locus_tag="SSP_RS12400"
/old_locus_tag="SSPP126"
CDS 24270..24893
/locus_tag="SSP_RS12400"
/old_locus_tag="SSPP126"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_002508706.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="zinc ribbon domain-containing protein"
/protein_id="WP_011304048.1"
/translation="MIGYEFFVSEKLENCKYKYIKAINDYIKQEKSHIIGIDLGKYHY
LTASNIDRSFVFVDKHNTLFHLFRKYERRIANKQYDNSEAYSKLKTGLKSHINQVVNE
MLEQTSNRFQTVFALDDHGSSHLSFPSLVFDLTYFAIKQRKNESDEILIVDESFTSIE
CPICHDRNQYNRTNKNKFKCTKCGFIHQNNDIVAASNIAKKGQLLNS"
gene 24911..25189
/locus_tag="SSP_RS12405"
/old_locus_tag="SSPP127"
CDS 24911..25189
/locus_tag="SSP_RS12405"
/old_locus_tag="SSPP127"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_002508705.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_002508705.1"
/translation="MMNNKQKARLKHYKNYDYPKQAYAFFDHKKVKVVLNNGESFTGY
IVKEYTYEILLVKSDGIKDPKDNELEKRTLIPKHSIAYTTNFIHLPQE"
gene 25891..26565
/locus_tag="SSP_RS12410"
/old_locus_tag="SSPP128"
CDS 25891..26565
/locus_tag="SSP_RS12410"
/old_locus_tag="SSPP128"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001105942.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS6 family transposase"
/protein_id="WP_011304049.1"
/translation="MNYFRYKQFNKDVITVAVGYYLRYALSYRDISEILSERGVNVHH
STVYRWVQEYAPILYQIWKKKHKKAYYKLRIDETYIKIKGKWSYLYRAIDAEGHTLDI
WLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFKLKPDCHCTSK
YLNNLIEQDHRHIKVRNTRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCQEI
SIMLAS"
gene 26612..26740
/locus_tag="SSP_RS13305"
CDS 26612..26740
/locus_tag="SSP_RS13305"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_256107125.1"
/translation="MQQNQNYNTSESHSEPNTEQESNTDKNSHNDKKGLFSRLFGR"
gene complement(26788..27057)
/locus_tag="SSP_RS12415"
/old_locus_tag="SSPP129"
CDS complement(26788..27057)
/locus_tag="SSP_RS12415"
/old_locus_tag="SSPP129"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_002508598.1"
/GO_process="GO:0008219 - cell death [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="Txe/YoeB family addiction module toxin"
/protein_id="WP_011304050.1"
/translation="MAKLNITFSPQAFEDYEYFQLKDRPMVKRINKLLKSINRDGALG
GIGKPEKLVGSLSGYYSRRINQEHRLVYTVNDTSIMVASCRYHYR"
gene complement(27058..27306)
/locus_tag="SSP_RS12420"
/old_locus_tag="SSPP130"
CDS complement(27058..27306)
/locus_tag="SSP_RS12420"
/old_locus_tag="SSPP130"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001608026.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type II toxin-antitoxin system Phd/YefM family
antitoxin"
/protein_id="WP_011304051.1"
/translation="MTVKNYTFVRDNFRDMINKVNDDSDTITITTKDRNAVLMSEDDY
DAIMETLYLQQNPSNAKHLAESIENLERGNVKSKEIEI"
gene complement(27614..28612)
/locus_tag="SSP_RS12425"
/old_locus_tag="SSPP132"
CDS complement(27614..28612)
/locus_tag="SSP_RS12425"
/old_locus_tag="SSPP132"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011304053.1"
/GO_function="GO:0008641 - ubiquitin-like modifier
activating enzyme activity [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ThiF family adenylyltransferase"
/protein_id="WP_041785008.1"
/translation="MERYNRQVRYHQFGEYGQSQLQKTHVMIMGAGALGSHSAEMLVR
MGVGSLTVIDMDIVELSNLHRQALYDELDAEKMLPKVEALKHKLNQINSNVQVIAIDR
EITNLNIENLLSTYHPDIVIDGMDHFKIRYLINESCNKQNIPWIYGAAVGSKGTVYGI
DDQGPCLKCLLETMPSTGESCAINGVLPPVIYQVASIQVSELMRWVSGEAFSKKLITI
DCFNMQYKSMDVNALKQSDCNVCKKHEYALLNDKYDNKIEKQCGDMFLLRFNADIFSH
TDYLPVTVKKANNFVKLLSYKPYEITLFKDGRMHVYGVENEGEAEKIYREIGKSLS"
gene complement(28612..29379)
/locus_tag="SSP_RS12430"
/old_locus_tag="SSPP133"
CDS complement(28612..29379)
/locus_tag="SSP_RS12430"
/old_locus_tag="SSPP133"
/EC_number="2.8.1.10"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015901320.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="thiazole synthase"
/protein_id="WP_011304054.1"
/translation="MFKIGNFTLNSRLLLGTGKFDNEEIQTQAIAAAETEVLTFAVRR
MNLYDKDLPNPLAKVDLSKFITFPNTAGAKTAKEAVRIAEIANHAGVCDMIKVEVIGD
DETLLPDPLETYEACKVLLEKGYTVCPYISNDVVLAKRLEELGVHAIMPLASPIGTGR
GINNPLNLRYIIERVNVPVIVDAGIGSPKDACHAMELGADGILLNTAISSAADPVKMA
EAMNKGISAGRLSYEAGRIPVKYTAQASSPTEGIGFL"
gene complement(29381..29581)
/gene="thiS"
/locus_tag="SSP_RS12435"
/old_locus_tag="SSPP134"
CDS complement(29381..29581)
/gene="thiS"
/locus_tag="SSP_RS12435"
/old_locus_tag="SSPP134"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011304055.1"
/GO_function="GO:0003824 - catalytic activity [Evidence
IEA]"
/GO_process="GO:0009228 - thiamine biosynthetic process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="sulfur carrier protein ThiS"
/protein_id="WP_011304055.1"
/translation="MKCKINGDVFNFEQPINIQEIIQSLGLDETRIIVEHNETLIKRE
QFTSRIVNDEDNLELLEFVGGG"
gene complement(29571..30683)
/locus_tag="SSP_RS12440"
/old_locus_tag="SSPP135"
CDS complement(29571..30683)
/locus_tag="SSP_RS12440"
/old_locus_tag="SSPP135"
/EC_number="1.-.-.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_002506451.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="FAD-dependent oxidoreductase"
/protein_id="WP_011304056.1"
/translation="MYDVIIIGSGVMGMSIARGLSQSFANIAVIDRDEAGKHASYKAG
GMLGAQNEFTKNSALFSLATTSQKMFKPLRDSLLEEVGVDIEYLNSGLIKLATNHYDN
KKIEQQYQFLRQHFASVERLSPTDVQHMSNGAITSKHTNGIYMPEDNQINANRYTKGL
LKSLSNRHIDRIYQTTVTHIESIKDGYRVETRNGAYYTEKLIVTGGAWTGKLLQQYLP
CETVIGVKGEALLVEQPDLNLNITMFLTNGCYVIPKLKNRYLIGATSYFNDYSVGVSN
SGKSWLKSQALHYIPDLKNGKIINQWSGIRPYCQNEQPIMDEVDKDLFVIAGHYRNGI
LLSPLIGELMSQWIISGHRPKQLYDFQIRRGERNEM"
gene complement(30676..31260)
/locus_tag="SSP_RS12445"
/old_locus_tag="SSPP136"
CDS complement(30676..31260)
/locus_tag="SSP_RS12445"
/old_locus_tag="SSPP136"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_017723966.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="thiamine phosphate synthase"
/protein_id="WP_041785010.1"
/translation="MFIAITPYQDLSKSHIKHYCEIEGVIDYLLIRVPMNTEEVIQWV
HGLLKNEFPKDKIIVHSDINVIIQCDLSAIHFRESDPYIEEVQASYPDMQISMSTHHK
DAIANAKYLGLDFVLFGHVFETSSKPQQTPRAKSEVEEALQIDIPIIAIGGINQHTLS
SLPNGFSGIAGISVFNQYSKEKLINMKEVWDGHV"
regulatory complement(31329..31438)
/regulatory_class="riboswitch"
/inference="COORDINATES: nucleotide
motif:Rfam:14.4:RF00059"
/inference="COORDINATES: profile:INFERNAL:1.1.1"
/note="TPP riboswitch; Derived by automated computational
analysis using gene prediction method: cmsearch."
/bound_moiety="thiamine pyrophosphate"
/db_xref="RFAM:RF00059"
gene complement(31575..33062)
/gene="xylB"
/locus_tag="SSP_RS12450"
/old_locus_tag="SSPP137"
CDS complement(31575..33062)
/gene="xylB"
/locus_tag="SSP_RS12450"
/old_locus_tag="SSPP137"
/EC_number="2.7.1.17"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_017723967.1"
/GO_function="GO:0004856 - xylulokinase activity [Evidence
IEA]"
/GO_function="GO:0005515 - protein binding [Evidence IEA]"
/GO_process="GO:0005997 - xylulose metabolic process
[Evidence IEA]"
/GO_process="GO:0042732 - D-xylose metabolic process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="xylulokinase"
/protein_id="WP_103314675.1"
/translation="MNEAVLGIDIGTSSVKVIAVSKEGEVLAKVSEGLDIIQLQSGCN
EQQPDEWFEATKSCIRQILSASALSDIYIRGLSLSGQMHSLVVLDSTNKPLRNAILWN
DTRSTHQCTTIEQQFGDYILSNPVLEGFTLTKLLWIKDNEPNNWNKIATFLLPKDYVR
FKLTGKINMEYSDASSTLLLDPKQKSWSKTTGSQFRIHDIYPSLVSSGDFIGYVESSL
AKSLGLTGEVAVFAGGGDNACGALGAGVIKSNDTLCSIGTSGTLLTCESGEGKTYRHN
LHYFNHVVEDKSYVMGVTLAAGDSLNWLKKHVFPGLTFNQILSLASNSTIGSEGLLFA
PYLSGERTPHGDSQIRGSFIGLSTLHTNADIARSVIEGITYSLYETLVHLREQGKDIT
HITSIGGGARNDFWLQLQADIFNAKVSKLKYEEGPCMGAAMLAIVGLSWYESLEDVVD
QFIVYDRTFLPNEVHHERYVKYFEIYQEVYRQTRPITARLLELSL"
gene 33229..33903
/locus_tag="SSP_RS12455"
/old_locus_tag="SSPP138"
CDS 33229..33903
/locus_tag="SSP_RS12455"
/old_locus_tag="SSPP138"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001105942.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS6-like element IS257 family transposase"
/protein_id="WP_011304059.1"
/translation="MNYFRYKQFNKDVITVAVGYYLRYALSYRDISEILSERGVNVHH
STVYRWVQEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHTLDI
WLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFKLKPGCHCTSK
YLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEI
SIMLAS"
gene complement(33944..34774)
/locus_tag="SSP_RS12460"
/old_locus_tag="SSPP139"
CDS complement(33944..34774)
/locus_tag="SSP_RS12460"
/old_locus_tag="SSPP139"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_000417609.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0006260 - DNA replication [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="protein rep"
/protein_id="WP_041785013.1"
/translation="MEKYTEKKQRNQVFQKFIKRHIGENQMDLVEDCNTFLSFVADKT
LEKQKLYKANSCKNRFCPVCAWRKARKDALGLSLMMQYIKQQEKKEFIFLTLTTPNVM
SDELENEIKRYNNSFRKLIKRKKVDSVIKGYVRKLEITYNKKRDDYNPHFHVLIAVNK
SYFTDKRYYISQQEWLDLWRDVTGISEITQVQVQKIRQNNNKELYEMAKYSGKDSDYL
INQKVFDVFYKSLKGKQVLVYSGLFKQAKKKLKNGDLDYLKEIDPTEYIYQIFGSVAK
"
gene 35127..35801
/locus_tag="SSP_RS12465"
/old_locus_tag="SSPP142"
CDS 35127..35801
/locus_tag="SSP_RS12465"
/old_locus_tag="SSPP142"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015075392.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/GO_function="GO:0015267 - channel activity [Evidence
IEA]"
/GO_process="GO:0055085 - transmembrane transport
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="aquaporin"
/protein_id="WP_011304063.1"
/translation="MRKIIAEFLGTFILVFFGTGTAVFMSLSPDNSVGTLGVAIAFGL
TIIAAAYAIGDISGGHLNPAVSLGMFLDKRLSLINLFIYTISQTMGAIFATFLIWSIS
STLKTDLDQYGANLPGDLSLSGAFLVEVILTFVFVFIVLSVTTTKFIAPNLAVLVIGF
TLTMVHLIGIPLTGTSVNPARSIGPALFTGGEALSTLWIFILAPLLGAVIAALTHKIL
RKPNIQ"
gene complement(36018..36467)
/locus_tag="SSP_RS12470"
/old_locus_tag="SSPP143"
CDS complement(36018..36467)
/locus_tag="SSP_RS12470"
/old_locus_tag="SSPP143"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_011304064.1"
/translation="MGSNNEVDTKENVSFGFGLGVVFIVASILTFYFYPGLITRMICA
LFVFIGFFGIGNEFEKMELRTPYKVSLGFSCLILAFWGGEYFSWIFIIFISFSSGIFF
SALAEYLMIRGKSKKKTDKGVTEIEGVLSIIGSLCSIIGFIVALLNL"
gene complement(37488..>37607)
/locus_tag="SSP_RS12885"
/old_locus_tag="SSPP144"
/pseudo
CDS complement(37488..>37607)
/locus_tag="SSP_RS12885"
/old_locus_tag="SSPP144"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_000366623.1"
/note="incomplete; partial in the middle of a contig;
missing N-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="replication protein"
gene 37663..38337
/locus_tag="SSP_RS12475"
/old_locus_tag="SSPP145"
CDS 37663..38337
/locus_tag="SSP_RS12475"
/old_locus_tag="SSPP145"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001105942.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS6-like element IS257 family transposase"
/protein_id="WP_011304059.1"
/translation="MNYFRYKQFNKDVITVAVGYYLRYALSYRDISEILSERGVNVHH
STVYRWVQEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHTLDI
WLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFKLKPGCHCTSK
YLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEI
SIMLAS"
CONTIG join(AP008935.1:1..38454)
//
