LOCUS NC_009959 72296 bp DNA circular CON 02-MAY-2023
DEFINITION Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI05, complete
sequence.
ACCESSION NC_009959 NZ_AAVE01000000 NZ_AAVE01000001-NZ_AAVE01000027
VERSION NC_009959.1
DBLINK BioProject: PRJNA224116
BioSample: SAMN02598387
Assembly: GCF_000018145.1
KEYWORDS RefSeq.
SOURCE Dinoroseobacter shibae DFL 12 = DSM 16493
ORGANISM Dinoroseobacter shibae DFL 12 = DSM 16493
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
Roseobacteraceae; Dinoroseobacter.
REFERENCE 1 (bases 1 to 72296)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T.,
Dalin,E., Tice,H., Pitluck,S., Thompson,L.S., Brettin,T., Bruce,D.,
Detter,J.C., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Kim,E. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of chromosome of Dinoroseobacter shibae DFL 12
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 72296)
AUTHORS Liesegang,H. and Wagner-Doebler,I.
TITLE The Roseobacter - microalgae symbiosis: Adaptation to viral
pressure, horizontal gene transfer, and ability to synthesize
vitamine B12 under all conditions are revealed by the genome
sequence
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 72296)
AUTHORS Liesegang,H. and Wagner-Doebler,I.
TITLE Direct Submission
JOURNAL Submitted (06-JUL-2009) HZI-Braunschweig, Braunschweig, Germany
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 72296)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T.,
Dalin,E., Tice,H., Pitluck,S., Thompson,L.S., Brettin,T., Bruce,D.,
Detter,J.C., Han,C., Tapia,R., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Kim,E. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2007) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT REFSEQ INFORMATION: The reference sequence is identical to
CP000835.1.
URL -- http://www.jgi.doe.gov
JGI Project ID: 4002768
Source DNA and bacteria available from Irene Wagner-Dobler
(Irene.Wagner-Doebler@helmholtz-hzi.de)
Contacts: Irene Wagner-Dobler
(Irene.Wagner-Doebler@helmholtz-hzi.de)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LANL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Date :: 05/02/2023 02:01:02
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 6.5
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA
Genes (total) :: 4,328
CDSs (total) :: 4,274
Genes (coding) :: 4,219
CDSs (with protein) :: 4,219
Genes (RNA) :: 54
rRNAs :: 2, 2, 2 (5S, 16S, 23S)
complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)
tRNAs :: 44
ncRNAs :: 4
Pseudo Genes (total) :: 55
CDSs (without protein) :: 55
Pseudo Genes (ambiguous residues) :: 0 of 55
Pseudo Genes (frameshifted) :: 20 of 55
Pseudo Genes (incomplete) :: 37 of 55
Pseudo Genes (internal stop) :: 17 of 55
Pseudo Genes (multiple problems) :: 19 of 55
CRISPR Arrays :: 2
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..72296
/organism="Dinoroseobacter shibae DFL 12 = DSM 16493"
/mol_type="genomic DNA"
/strain="DFL 12"
/type_material="type strain of Dinoroseobacter shibae"
/db_xref="taxon:398580"
/plasmid="pDSHI05"
gene complement(24..977)
/locus_tag="DSHI_RS20845"
/old_locus_tag="Dshi_4154"
CDS complement(24..977)
/locus_tag="DSHI_RS20845"
/old_locus_tag="Dshi_4154"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010394426.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="quinoprotein relay system zinc metallohydrolase
1"
/protein_id="WP_012187431.1"
/translation="MADLRFSRRASLGLLASAALIRPARAAARLSYDLRPQAVAKGVW
MIEGSTEYFTMENGGAIVNCALLQGDTGLIVVDTGSSLRYGEALKSVADGLDLRGVST
VINTHHHPDHFFGNQVFADRPILALGETILQADAQADALADNMYRILGDWMRGTDPVI
PRNVISGGDVVIDGRAFLALPLSGHTEGDLALLDRESGILIAGDLVFYDRAATTPSAD
LPVWHAALDTLEGTGAAAVLPGHGPIDRSGAAIPQTRAYLRWLEDTLRTAAGQGLDMI
EVMDLPLPPEFAGLGAEPEEFHRSIAHLYPSIEREVMPRAN"
gene complement(977..1759)
/locus_tag="DSHI_RS20850"
/old_locus_tag="Dshi_4155"
CDS complement(977..1759)
/locus_tag="DSHI_RS20850"
/old_locus_tag="Dshi_4155"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011047261.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="quinoprotein dehydrogenase-associated SoxYZ-like
carrier"
/protein_id="WP_012187432.1"
/translation="MTRTALVALTVSGLAAPAALADVQTPLQDPMNSGMWEYHQQNLL
GDPADIRFDDRVIVRGPGEAEDTVNVPLLVDASALDNVDKIVISADYGPIPHIMTYYP
GQAEAKIALRFKIDQGTAIRASVRTHDGAWHIGSTYIDAAGGGCSAPAAAYANADWYD
RLGEIHGQVWPASGRARMVVDHPMDTGLAGDIPVFIIEDLYLRDDAGTELARLELFEP
VNEDPAFTVYFDPEIMPASLHVDGRDNNGNEIEGLLQAADTH"
gene 1936..3684
/locus_tag="DSHI_RS20855"
/old_locus_tag="Dshi_4156"
CDS 1936..3684
/locus_tag="DSHI_RS20855"
/old_locus_tag="Dshi_4156"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013960689.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="sigma-54-dependent Fis family transcriptional
regulator"
/protein_id="WP_012187433.1"
/translation="MGDLAHVTEIDRVVSGRAQGSLRDAVVTESWRRCVESYGLNPTA
TDAPHIVTDAELRAHREQAERLIAVARSGLQGLFKQVAGHNYVLLLADAQGVCVDFFG
DPRFEDELRSAGLYLGSNWQEELAGTCGVGSCIVTGEAVTIHQDDHFGLAHTPLSCTA
APIYDSLGQLSAVLDISLLRSPTPKSSQNLAMSLVKASARRVEMANLMATARQDWVLR
FSTSPEFLEVDPEAAVSLDGAGRITGLTHAAQAALGATDPGALLGTRIDALMEMSIDD
LPDLMRGRPTEERVLRLRDGRGVFGHAIAPQAPRTPRPAAVPEMPAPLAGFAGPDPVL
TPLLRRLGQLAGTEVPLLLLGETGTGKERLARAVHLSGPAGRGFTVLRCAGLGRDPLP
EPPAGTLFLRGVEDLDTAGQGAVLALLEARPDLRAIASARTDISAAVKAGAFRSDLFF
RLAGHVAHLPPLRLRHDLEWLLTRLMRRHVARDLSLSPAARAELSARNWPGNIRELQS
TLDVAAALAEGRVIDLPDLPGPSLPEAAAAPPEADLQSLLDACGWNMSQAARRLGVNR
STVLRRVRKAGLTPPS"
gene 3833..5632
/locus_tag="DSHI_RS20860"
/old_locus_tag="Dshi_4157"
CDS 3833..5632
/locus_tag="DSHI_RS20860"
/old_locus_tag="Dshi_4157"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011569789.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="NAD(P)/FAD-dependent oxidoreductase"
/protein_id="WP_012187434.1"
/translation="MLDSTVSDQTEAFLEAFGKALEDGDIAAATEMFLDDCYWRDLVS
FTWNIKTVEGKDQVADMLRHQLGTTKPRGWALAEGEMPTEEDGVTTAWITFETDVARG
YGLIRLKEGKIWTLLTTMVELKGHEEPKGFDRPLGAKHGAGKHRTTWAEERAREEAEL
GYTTQPYCLIIGGGQGGIALGARLRQLGVPTIIVEKNERPGDSWRNRYKSLCLHDPVW
YDHLPYIKFPENWPVFSPKDKIGDWLEMYTKVMELNYWTRTTAKSAEFDEASGTWTVV
VDRDGEEVVLRPTQLVMATGMSGKARMPDFPGMDTFKGDQHHSSKHPGPDPYKGKKAV
VIGSNNSAHDICAALWEGDVDVTMVQRSSTHIVRSDTLMDVGLGALYSEEAVANGVTT
EKADLIFASLPYAILHEFQIPAYEEMKRRDAEFYEGLEKAGFWLDWGDDGSGLFMKYL
RRGSGYYIDIGASQLIIDGEIKLKRGQVTEVVEDGVILDDGTKLEADLIVYATGYNSM
NGWVADLMGQDKADQLGKVWGLGSDTTKDPGPWEGEQRNMWKPTQVPNLWMHGGNLHQ
SRHYSQFLSLQIKARMEGIPTPVYGLQEVHHLS"
gene 5711..6484
/locus_tag="DSHI_RS20865"
/old_locus_tag="Dshi_4158"
CDS 5711..6484
/locus_tag="DSHI_RS20865"
/old_locus_tag="Dshi_4158"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_005565102.1"
/GO_function="GO:0019152 - acetoin dehydrogenase activity
[Evidence IEA]"
/GO_process="GO:0045150 - acetoin catabolic process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="acetoin reductase"
/protein_id="WP_012187435.1"
/translation="MATQKKVALVTGGAKGIGLGIAERLQRDGFALALVDMNGAQLEA
AAAGLRDGPVIAITADVTQRDAVFAAVDRAEAELGGFDVMINNAGIAQVQPIAEITEA
ELDQVHEVNVKGVVWGIQAAAAKFKARGHGGSIISAASIAAHDGYAMLGAYCASKFAV
RALTQVAAKEFAADGITVNAYCPGIVGTDMWTEIDARFAELTGAAKGATYDAFVKSIA
LGRSETPEDVAGLVSFLAGPDSAYMTGQCVIIDGGMVYR"
gene 6606..7658
/locus_tag="DSHI_RS20870"
/old_locus_tag="Dshi_4159"
CDS 6606..7658
/locus_tag="DSHI_RS20870"
/old_locus_tag="Dshi_4159"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018001415.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="2,3-butanediol dehydrogenase"
/protein_id="WP_012187436.1"
/translation="MKAARWHGAKDIRVEDVDEPTPGAGEVKIKVAWTGICGSDLHEF
LAGPIFVPVGEDHPLSHDKAPITMGHEYCGEITELGDGVTDLSVGDRVAIEPIFACGT
CAACRDGRYNLCEKLGFVGLSGGHGGFAAYSVVPARMLHRMPEGLSMEQGALVEPAAV
ALHAVRVSAFKAGDRAAVFGAGPIGLLVVESLRIAGASKIVVVEPSETRRAKAMELGA
TTAVDPGAEDAVAAVQAACPGGVEVAFEVTGVPAVLAQAIDATRYEGETLVVSIWETE
ASFQPNTVVLKERNIKGTIAYRNVYPAVMDLMQQGYFQAERLVTRRIGLDDIVRDGFE
ALVAEKSQIKILVEAP"
gene complement(7713..8699)
/locus_tag="DSHI_RS20875"
/old_locus_tag="Dshi_4160"
CDS complement(7713..8699)
/locus_tag="DSHI_RS20875"
/old_locus_tag="Dshi_4160"
/EC_number="1.3.1.33"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011056423.1"
/GO_function="GO:0016630 - protochlorophyllide reductase
activity [Evidence IEA]"
/GO_process="GO:0015995 - chlorophyll biosynthetic process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="protochlorophyllide reductase"
/protein_id="WP_012187437.1"
/translation="MTLDPMPRAIVTGASSGVGLHATKSLIDRGWHVTMACRDLAKAE
AAARSLDLDPGRYALAHLDLGSLASVRAFHANIARDHDSLDALVCNAAVYKPRLTQPG
RSPDGFEISVATNYFGHFLLANLMLPLLEGAPSPRLITLGTVTANSEEFGGKVPIPAP
ADLGDFAGLKAGFRAPVAMIDGKPFKAGKAYKDSKLCTMMMSRELHTRHHARTGIVFA
TLYPGCVADTPLFRDTPKAFQTIFPWFQKNVTKGYVSQALSGERVAMVVADPEFAQSG
VHWSWGNRQREGRSAFAQGLSTKATDAARSAELWELTAALTGLTTPAEPVAA"
gene 8902..9714
/locus_tag="DSHI_RS20880"
/old_locus_tag="Dshi_4161"
CDS 8902..9714
/locus_tag="DSHI_RS20880"
/old_locus_tag="Dshi_4161"
/inference="COORDINATES: protein motif:HMM:NF018352.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="MipA/OmpV family protein"
/protein_id="WP_012187438.1"
/translation="MRRFPRPGALIQGALAALALVGAAGTAMAETPIELPGVRGVGLL
AFGAGPQYIGADESVWLPVPAGTFALGETRRVTVTGNYLNIDLLDHPNWSAGPAGVLR
FGRGDVKDDEVAALPDIDMSLDLGGFVAYEVVGADIRQRRAVGLSVVQDVTGAHGGFV
ASAYARAWTPLGAFGALGMGAAVSYGSGDYMDSYFSVDAQGAAASGLEVFSAGGGARD
ARVFAIYVQPVSRSWAIGGGLIYGWLLDDAAASPVVDSRGQLYAGVGIARIW"
gene complement(9725..10768)
/locus_tag="DSHI_RS20885"
/old_locus_tag="Dshi_4162"
CDS complement(9725..10768)
/locus_tag="DSHI_RS20885"
/old_locus_tag="Dshi_4162"
/EC_number="2.4.-.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011453435.1"
/GO_function="GO:0016757 - glycosyltransferase activity
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="glycosyltransferase family 4 protein"
/protein_id="WP_012187439.1"
/translation="MSLRRAAFAIPGDLSTPTGGYIYERRLLEGLWAQGRDVTHIRLG
TSFPDPTDADMADAIAQLAALEPDRAVILDGFISATLDTRALAALPLPTVAVVHHPLA
LESGLDAERRDRLYRVERDNLVHIDHVVVPSPNTARTLTASYGVAADRITIARPGTDR
PTRPRAPATPPLILSVGIQHPRKGHDTLLRALARLTHLDWTAVIAGKAYDPAHAALLD
RLLDETGLRDRVRIAGYVADAALAELYATATVFALATRYEGYGLVFDEALAHGLPIVS
CATGAVPETVPAEAGQLVPPDDAAAFATALAALLTDDALRARTAAAAARAGTRLPGWD
DTAATVGAVLETL"
gene complement(10765..12342)
/locus_tag="DSHI_RS20890"
/old_locus_tag="Dshi_4163"
CDS complement(10765..12342)
/locus_tag="DSHI_RS20890"
/old_locus_tag="Dshi_4163"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011453434.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/GO_process="GO:0055085 - transmembrane transport
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ABC transporter permease subunit"
/protein_id="WP_012187440.1"
/translation="MSAVATAPRARAGRGQNRGTWIGLILILALWELSGRLLVDSFVL
ASPSETLRYLVEDWRLMSRALGVTLSNAAAGFVIGNLAAVLLAGIAILWPRSERVVTG
LALLVFCLPLVATGPILRVFFGPGSGPQIVLAALAVYYTTLIPLLVGLRAAPDSWFDL
VRSYGRGRMAALVHVRLMAALPYLFAGLQIAAPAAFLGAMVGEFTGAERGMGVLTVRA
IRALDVEMTWGLATVATAVAILAYLAIGAVARRVLLEAPPVILAAPAASGRSRPALDA
GLVVALALAGWAGAIWLFGLNPFFAKGPLDVAEALIWAADAPQTRATIGAALAETAVF
LLPGYLAGLAAGAGLAILLVLVPAIAGTAMPLAIALRSVPIVTTAPLIVLLLGRGAVG
TITLVAVMVFFPSFVACLHGLRQAPGQVMDVFDSYAAGPVARLMRVRIPAMLPAFFAA
ARMAVPASVLAVTVVEWLATGAGIGSLMALSASLSDYDMLWSSVVLVSALSALGYAAV
GVVERRVLATYAPEQLA"
gene complement(12339..13145)
/locus_tag="DSHI_RS20895"
/old_locus_tag="Dshi_4164"
CDS complement(12339..13145)
/locus_tag="DSHI_RS20895"
/old_locus_tag="Dshi_4164"
/EC_number="7.6.2.14"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012640787.1"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/GO_function="GO:0016887 - ATP hydrolysis activity
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="WP_012187441.1"
/translation="MAPDHAPTPPPEVACIALAKTFPGGTEAVRPLDLSFAAGQTTAL
VGPSGCGKSTVLRLVAGLESPSAGRIEIAGAPPAETLRRAGLSVAFQDPSLLPWRSVR
GNIELALGLARRPVEAGEVDQLIRLVGLDGFAETRPAELSGGMRQRAAIARALATRPG
LLLLDEPFGAVDELTRRQLAQDLPRIWEARGTTTLLVTHSVTEAVALSDRVIVLSPRP
AEVVADIAIDLPRPRPEGVAQTDAAMALIEQVFAALSEGMARRQRPLAAQ"
gene complement(13135..14130)
/locus_tag="DSHI_RS20900"
/old_locus_tag="Dshi_4165"
CDS complement(13135..14130)
/locus_tag="DSHI_RS20900"
/old_locus_tag="Dshi_4165"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008887891.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ABC transporter substrate-binding protein"
/protein_id="WP_012187442.1"
/translation="MPKTLTRRTVLGSAAAAAGATALGALPHRARAQSAVSLQLSWLH
SSQFAGSYIALDRGWWAEAGLEVSLLPGGPNAPVEPPVVAGTALVGISAADYTAAAVE
QGAPFKILGVAMQKNPFVVASLPANPVNEPADLVGKRIGMALANTPVLQALCTLNGVD
MGGIDIVPTQYSAQPLLAGEVDCLLCWETDLPVAMAMQGVESLTMLMADHGYAVHSQT
YIATEDSLANRRADLVALMSGEARGWDAYRADTDAAAELTLSMYPDAGLDLETQKLQA
ARQVPLMFSELTDANGFGWWTDETVAANIETLALLGRTVTPDLWDRSILEEVHGA"
gene complement(14227..15177)
/locus_tag="DSHI_RS20905"
/old_locus_tag="Dshi_4166"
CDS complement(14227..15177)
/locus_tag="DSHI_RS20905"
/old_locus_tag="Dshi_4166"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019955712.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="lysylphosphatidylglycerol synthase transmembrane
domain-containing protein"
/protein_id="WP_012187443.1"
/translation="MSRPLPRRVLPVLQAALAVGLLALLWRAADGPAALASLKAADWR
WLALGLAALSLQTVLSALRWQLTARQFGIALGTGHAIREYYLAQVVNQSLPGGMIGDA
GRAVRARAQAGLLASGQAVVFERLAGQIAMFLTLAVGFGVTWALPGGLDWPAWLAGPL
ALALALGLALPLLIRGAARLPGATGRAAAGLRATVRRALMSGAALPGQIWLSLGTTLC
NLAAFAVCARAVGVDLGPGAVAALVPLILVTMLIPLSISGWGLREGAAAALLPLAGAT
ASGGLAASVAFGLTFAVASLPGIALIWAAPRPPVPRSGQP"
gene complement(15174..16799)
/locus_tag="DSHI_RS20910"
/old_locus_tag="Dshi_4167"
CDS complement(15174..16799)
/locus_tag="DSHI_RS20910"
/old_locus_tag="Dshi_4167"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011453430.1"
/GO_function="GO:0008484 - sulfuric ester hydrolase
activity [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="sulfatase-like hydrolase/transferase"
/protein_id="WP_012187444.1"
/translation="MIPSPLRLGLGALVLHLVLVQPNHPAALTWGALAMFPLELPVIL
LVLAALPPGRVTAWLRAGLTALLVLIAVLKTADFAMFSALGRGFNPISDMALVEAGLR
LSTGAIGPVLTGLAVVAALLAVAGVALAIWWATGVWAGLRLPRRAGLGLGVAAGLAAG
VAGAEIGQAMGRWSLPVTPPGAAFTARVGVERMGMARATLADLRAFEIAAATDPLAGR
ADLLGAIDRDVLVVFVESYGRASLDTPLYAETHRATLAAAEARLGALGLSMRSGLLTA
PTRGGQSWLSHATFANGLWVDNQTSYGAALASGRRTLFHLAAEAGFHTAAVMPQITLD
WPEADLMGFETVLAAADLGYAGQPFNWVTMPDQFTFAAMDRLLRDRAETRPYFVQMAL
GSSHAPWVPVPELVPWEAIGDGTIFDPMAAAGDPPDVVWRDRDRVREQYRLALDYALR
VVFDYAARHAGDPPLILVLGDHQAAGFVALDERAEVPVHLIGPADLVEVAAGWGWSPG
LIPGPEAAPLRMDEMRDLILQSFASQAPPEGES"
gene complement(16796..17503)
/locus_tag="DSHI_RS20915"
/old_locus_tag="Dshi_4168"
CDS complement(16796..17503)
/locus_tag="DSHI_RS20915"
/old_locus_tag="Dshi_4168"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008887912.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="CDP-alcohol phosphatidyltransferase family
protein"
/protein_id="WP_245533105.1"
/translation="MPVPGTGGPEDAFALAALLLAALTGLGAALLPGAGPLSVGLALA
AFGTGAVIAGRDLRRAYPHGRLGLCNLVTLGRLALTSALLVPLVAGIGAAWPIFAVAG
VALALDGVDGWLARKQGLASAFGARFDVEVDAALALILAVNAATGPAGLAAALLGLPR
YLFVLAARGLPWMRRDLPERFSRKTVCVLQMGVLIALQAPVLPAALALPLVGLALAAL
AWSFAVDLRWLWRKRAA"
gene 17646..18203
/locus_tag="DSHI_RS20920"
/old_locus_tag="Dshi_4169"
CDS 17646..18203
/locus_tag="DSHI_RS20920"
/old_locus_tag="Dshi_4169"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011750582.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/GO_function="GO:0009055 - electron transfer activity
[Evidence IEA]"
/GO_function="GO:0020037 - heme binding [Evidence IEA]"
/GO_function="GO:0046872 - metal ion binding [Evidence
IEA]"
/GO_process="GO:0022904 - respiratory electron transport
chain [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="cytochrome b"
/protein_id="WP_012187446.1"
/translation="MSQAETRYRAPARLFHWGMAVLILATIPVGVVMVQEGLPRPLQN
SLFIFHKNVGVLLLLLVLARLAYRLWRPPAPLPPSVTGMQRTAAHLSHLALYTLLIVM
PVAGYVRVKAGGFPIETLDALGVPSLVPRSDALAELAKTVHYLGSYAIAALIALHVCA
AAYHGIAKRDGIFSRMWPPFGGTVD"
gene 18287..19852
/gene="mdoH"
/locus_tag="DSHI_RS20925"
/old_locus_tag="Dshi_4170"
CDS 18287..19852
/gene="mdoH"
/locus_tag="DSHI_RS20925"
/old_locus_tag="Dshi_4170"
/EC_number="2.4.1.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007818211.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="glucans biosynthesis glucosyltransferase MdoH"
/protein_id="WP_012187447.1"
/translation="MSLVEPISRAWRVDAGWPGPRAAGLGLALGLTLAIVAGFATSVT
DWTPGALLALPLVMLGAVWIAGGAATALLGLALRPDPEPPVPAGWRPASRTALLVTLC
KEDPAPLAAHLVALRAGLDRVGLDAGAHIFVLSDTSGAAAIAAEEAAFAPLIEAGTVT
YRRRAENTGRKPGNIADWLAVHGDRFEHMMVLDADSRMSPDRIRRMIHRMDRTPALGL
LQAGLALVPGRTRFGRHQRTGVRLLSRGFGRGFAAWTGDSGNYWGHNAIMRVAAFRSA
AALPVLPGRAPFGGALLSHDFIEAAWIRRAGWAVALDPDMTGSAEDAPQTLAAFHARD
RRWCQGNLQHLRLLAAPGLDPVSRLHLLMGVLSYLVAPVWLVLIALIALGLVPVAGAL
PLLVAALVLLIPKLCALVEGLCRSRSWARRAVILRAWVGELATSTLIAPLVMLRQAGA
VLAVCLGRDCGWKTARRAGPTLPCGTVEAVAGAALVTLAVATSGSAALWLAPVALPLC
CAPLIVPVLDRAA"
gene 19852..21336
/locus_tag="DSHI_RS20930"
/old_locus_tag="Dshi_4171"
CDS 19852..21336
/locus_tag="DSHI_RS20930"
/old_locus_tag="Dshi_4171"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007818209.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="glucan biosynthesis protein"
/protein_id="WP_012187448.1"
/translation="MRRRTFLAGATCLATLPRLAPAQSVPTLLDAARALAAQPFARDT
APLPPPFAGLSYDAYRGIRPIPGRAALLPHGPDFAVDLLPPGLFFPDPVRIDLDRGDG
PQEVTLTPDLFDFAPRYFDTIPATAPGAGFSGLRLRHPLNTPDVLDEVLVVQGASYFR
AIGQAMVYGLSARAVALGTGGAGPEEFPRFTHLRLHPARDGTVRLEAVIDSPSLAGHL
DMVLRPGEDTVCDVAVTLLPRREIADIGIAPLTSMYLKGPLRAAVSDDFRPRVHDSDV
LRIENGAGETLWRPIANPARLETSAFLDDGPVSFGLFQSRRRFTDFEDTEARYHDRPA
AVVRPSGDWGRGAVMLVEIPTSDEFMDNIVAFWRPEAPLTAGSEHRFAYSLTWTRAAP
GTGLPHAIAQSRSGREHDRPGTRRYVIDIAGDATGLAPEITGPEAVAITGVSLFALPE
GRGSRLTFLLIPGEARAADLRVTLGVNGAPVWLHRWTRARDGGV"
gene 21403..22290
/locus_tag="DSHI_RS20935"
/old_locus_tag="Dshi_4172"
CDS 21403..22290
/locus_tag="DSHI_RS20935"
/old_locus_tag="Dshi_4172"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013964106.1"
/GO_function="GO:0043565 - sequence-specific DNA binding
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="WP_012187449.1"
/translation="MPRRYQDIYPSLPLLNSEAQTHISAAALMSVRYFQAAPDEMPED
VFAEHHVLLNLQDAPHRVQNRRDGVLHDFTFHKHEIVVTPAGMRSGWRWFATSDVIVV
TLDPEMVGRFAQSELGLLLDPQQFRDLPLFSDPDLCAAGVMLRDALEDDSLTSGVMFE
ALSRVLLVKLLQRYGQRRVEDADLSARFTAQHYNRVLTHIRAHLDRTITVEHLSREAG
MSPSHFSRVFKETLGTTPMQYVMAYRIEQAMKMMADPLRPLGDIALACGFADQAHFSR
SFKQVTGRTPRAHRAALSA"
gene 22428..23387
/locus_tag="DSHI_RS20940"
/old_locus_tag="Dshi_4173"
CDS 22428..23387
/locus_tag="DSHI_RS20940"
/old_locus_tag="Dshi_4173"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008232814.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="alpha/beta hydrolase"
/protein_id="WP_012187450.1"
/translation="MKTFALTTAAALLASTAVMAQAETRTISFENAGATLTGTLHLPE
DHDGRALPVVVVTGAWTSVEEQMPSVYAAEMVARGFAAVTFDFRGWGKSGDLPGAVRY
VESPAAKTADIRAAFDFVATLPEIDPTRINGLAICASAGYMIDAAAGNDRVQHLGLVA
PWLQNAEIVEAVYGGPEGVAGLIAVSRRAEAAGGEIIPAAGPEGAEGVLMPIGGYYFE
PDRGAIPAYDNRWNNAGWEGWLTYHPADNGARLTQPLAIVHSEAAAIPQGVRAFLDGY
AGQATLRMFDGVTQFDFYDTPEAVRHAADTVAAHFAAAPDGNI"
gene 23458..24015
/locus_tag="DSHI_RS20945"
/old_locus_tag="Dshi_4174"
CDS 23458..24015
/locus_tag="DSHI_RS20945"
/old_locus_tag="Dshi_4174"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011454444.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="nuclear transport factor 2 family protein"
/protein_id="WP_012187451.1"
/translation="MKALLLSAALALPLAAPVSASASLGGTPVTAETLVDRAEMIRIA
DAIDAAVDAKDWPVARSFFADEIMVDFTSLIGGDPATIPADALIAGWAGNLTDEKTSF
HLRGNHRIGFDGADRAVMQSHGYAWNRMDRGAAPENGGDPLWEVWGSYTHVFERSEAG
WKVTAMTFTAMAQRGNSFVRDTPGS"
gene complement(24079..25098)
/locus_tag="DSHI_RS20950"
/old_locus_tag="Dshi_4175"
CDS complement(24079..25098)
/locus_tag="DSHI_RS20950"
/old_locus_tag="Dshi_4175"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_014880911.1"
/GO_function="GO:0015562 - efflux transmembrane
transporter activity [Evidence IEA]"
/GO_process="GO:1905887 - autoinducer AI-2 transmembrane
transport [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="AI-2E family transporter"
/protein_id="WP_012187452.1"
/translation="MIDLLLSQRAARVMLALLAAIALVAALHLAQHILAPTVFALVLG
IVISPVADRLYGLGVPRLAVAVLLLVATLALIGLALLLVEPLFSLLIDELPRIKVAVA
GWIETASGLLRGIETISAEIENSVGAQAAQPQTAVPSVRDALWLAPGFAAQVFIFVGV
LFFFVLTRSELYAGTGPMEQRFRRADRAVARYFAAVTLVNIGLGVVTAMVLTAAGVNY
AVLWGLAAALLNFILYLGPMMIIAGLTIAGLVQFSGAQAFLPPFLFLLLNLTEANFVT
PLVVGKRLAMNPLLIFTAIVFGLWLWGPVGAIVALPVLLWAGVVMRPSLAMRGPGAAP
YVHVG"
gene 25262..25924
/locus_tag="DSHI_RS20955"
/old_locus_tag="Dshi_4176"
CDS 25262..25924
/locus_tag="DSHI_RS20955"
/old_locus_tag="Dshi_4176"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_009807159.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="oxidoreductase FAD/NAD(P)-binding subunit"
/protein_id="WP_012187453.1"
/translation="MTHKITLLETVELTPDTRHYVFTRPEGYGFTPGQATDFALDRYG
WRDATRPFTFTGDPEADVLCFTIKTYADREGVTDALWSATPGDGALIGDPWGAISDKG
PGVFIAGGAGITPFLGILKARARAGQLDGATLIFANGGPRDIIFRPLWDSLKGLKTVY
AVSEDGAGFAYRRITGEMLEAEIDDWDQRFYVCGPPPMEEDVVAMLTARGVPEDSIIR
EA"
gene complement(26016..27332)
/locus_tag="DSHI_RS20960"
/old_locus_tag="Dshi_4177"
CDS complement(26016..27332)
/locus_tag="DSHI_RS20960"
/old_locus_tag="Dshi_4177"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_009564143.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="acetamidase/formamidase family protein"
/protein_id="WP_012187454.1"
/translation="MPDGSTPNSRRSVVVSEFTNSVLDPEAPMLGPIENGGTIIANTA
PGCWGPMITPRLRGGHEVTTPVHVQGAEVGDGVAIRIRDITVTSLATASGHDSSPEGF
CLGDPYVAARCPVCDTVWPETHVEGIGQDAVKCDSCGNAVTPFEIVHGYTVTFDETRS
VGLTLPQEAAETLARDADHYAALPDASRQHSILTYAPSDMPGTLVRMRPFMGQLGTCP
SMAMPDSHNAGDFGAFLVGAPHDYAITAEQLAEHKTDGHMDIDAVRAGAIIVCPVKVP
GAGVYMGDMHAGQGDGEIAGHTMDVSGSVTLQVEVVKNYPIDGPVLFPLEEDLPPLAR
PFTEAEKAKGDRLAAKWGVKEIEPLAPISVIGTAANLNDAIENGLARAATLLDMTVAE
VRNRATINGAIEIGRAPGVIQVTFLAPLSKLDAVGLGECAREQYGL"
gene complement(27466..28224)
/locus_tag="DSHI_RS20965"
/old_locus_tag="Dshi_4178"
CDS complement(27466..28224)
/locus_tag="DSHI_RS20965"
/old_locus_tag="Dshi_4178"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011568662.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF3618 domain-containing protein"
/protein_id="WP_012187455.1"
/translation="MPDRTDAIERDIQTHRGLLAEAVSQLAGALSPERVSEAVGRDLQ
ARGGVVAEAAMERAKANPLALLLVGAGVAAMVAGPSKPAARPVYDDGRQSRASVAGAR
DPLSGEFDRRVAAATEGRPRPDASALRKALNSGLAHLPEPARRRVVEARKAAIAAQEE
VERRGAAAAREARRLHRRQPWSTAALAFGLGALAGTALPRTEIEDDAMGAQRDALLQE
AEFALRDELARMSETGQAALHEGLDAVTERISRH"
gene complement(28217..28627)
/locus_tag="DSHI_RS20970"
/old_locus_tag="Dshi_4179"
CDS complement(28217..28627)
/locus_tag="DSHI_RS20970"
/old_locus_tag="Dshi_4179"
/inference="COORDINATES: protein motif:HMM:NF018980.2"
/GO_component="GO:0005886 - plasma membrane [Evidence
IEA]"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="phage holin family protein"
/protein_id="WP_012187456.1"
/translation="MDNPDRHDPAPQDAPALLSELMQHLRGLVEAEIALARAEIRRKL
SDAGTGVTLVLCAIPLALVGLGLILTALVGALLALGWPLWLAALVPGAVCLVLAALLA
LVGKSRLSVAALTPQKILSHVRKDLQMLKETTHA"
gene complement(28620..29135)
/locus_tag="DSHI_RS21570"
/old_locus_tag="Dshi_4180"
CDS complement(28620..29135)
/locus_tag="DSHI_RS21570"
/old_locus_tag="Dshi_4180"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013960077.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012187457.1"
/translation="MTETQTSALRQELDSAAADATETARRAARDTGETVKDRARSEVE
TAADAASAAGERFDPDSLQAEAAQQIARGLDQLAVQLRDTDLSGAARSATRFARENPA
VTLGGAALLGFAVARFLKASADPETAAADAPREAGSDPWTGHVTGPDAETPASDPSRV
HTRAYGGARHG"
gene complement(29307..29495)
/locus_tag="DSHI_RS20980"
/old_locus_tag="Dshi_4181"
CDS complement(29307..29495)
/locus_tag="DSHI_RS20980"
/old_locus_tag="Dshi_4181"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008189426.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="PLDc N-terminal domain-containing protein"
/protein_id="WP_012187458.1"
/translation="MEYGIIGLIVLIANIYALVKTWTSAASTGAKLLWTLLILVLPVI
GFIIWFFAGPRGAAGRTA"
gene 29613..30521
/locus_tag="DSHI_RS20985"
/old_locus_tag="Dshi_4182"
CDS 29613..30521
/locus_tag="DSHI_RS20985"
/old_locus_tag="Dshi_4182"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_014878952.1"
/GO_function="GO:0008381 - mechanosensitive monoatomic ion
channel activity [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="mechanosensitive ion channel family protein"
/protein_id="WP_050757934.1"
/translation="MDTVEEIFPQNITAHLVAQLSGWAEGLIAALPRLTLALAVILVT
ALVVWAVRRLIQSLGRRAGLRRNLRDVLGMLANTGLWLAGLLLALTIVFPSITPGRAL
TTLGLGSVAIGFAFKDTLENFLAGILILLREPFTIGDHVDCEGAEGQVEQITIRDTHI
RQTDGQLVVVPNAMLFHNPVTVRTDQEFRRARIVCGVAYGEDVDAARKVIEDAVREVD
MVRNDVRDIQVFAMAFGASSIDFEITWWTGSAPVDIRASRDQVVAAVKGALDAAGIEI
PFPYRTLTLQGDALPVQVMKGRNAAE"
gene complement(30634..30933)
/locus_tag="DSHI_RS20990"
/old_locus_tag="Dshi_4183"
CDS complement(30634..30933)
/locus_tag="DSHI_RS20990"
/old_locus_tag="Dshi_4183"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="DUF883 family protein"
/protein_id="WP_012187460.1"
/translation="MSDVTHHHIPQPGDEKGAGNGRDRTVQAVQEAAETARDTLRETG
ESLSAASRDLAQAGAQQIETAHDTGTKFVKDNPTLALGAALGVGVLLGMALRTRS"
gene complement(31088..31285)
/locus_tag="DSHI_RS20995"
/old_locus_tag="Dshi_4184"
CDS complement(31088..31285)
/locus_tag="DSHI_RS20995"
/old_locus_tag="Dshi_4184"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019296333.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="CsbD family protein"
/protein_id="WP_012187461.1"
/translation="MDSDRIEGKWTELKGKLREQYGDLTDDEIEEARGNREQLEGKLQ
QKYGKTKDEARKEVDRMLDSI"
gene 31537..32229
/locus_tag="DSHI_RS21000"
/old_locus_tag="Dshi_4185"
CDS 31537..32229
/locus_tag="DSHI_RS21000"
/old_locus_tag="Dshi_4185"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012179200.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="FCD domain-containing protein"
/protein_id="WP_012187462.1"
/translation="MLTRTDQPERDECAERLRALIAEGGYAPGDRIPPERQLIEMMGI
TRAGLRRALDFLERDGVIWRHVGKGTFVSYGATDAVTEDAFAGIGNQLSPYRMMRARI
CVEPAIAREAAVYASREQVARIDAAAKRARAAASWSEYERQDDQFHRAVAEAADNALL
LALFDSLNRVRREVAWGAVTRSNARPPRDHSSFAEHDAICAALAAHDADAAFQAMRAH
LQSVSSRLFEGI"
gene 32317..33138
/locus_tag="DSHI_RS21005"
/old_locus_tag="Dshi_4186"
CDS 32317..33138
/locus_tag="DSHI_RS21005"
/old_locus_tag="Dshi_4186"
/EC_number="7.6.2.14"
/inference="COORDINATES: protein motif:HMM:NF012235.2"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/GO_function="GO:0016887 - ATP hydrolysis activity
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="WP_012187463.1"
/translation="MKDALLDVPAIELRGIRKTFTLSEDRDAQKVLALDGIDLTIRQG
EFLTIIGPSGCGKTTLLKIIASLISHDEGDVVVEGKPVHEPDISRAMVFQTFGLFPWK
TVIDNVTFPLTVRNFAPAEAREIAMKHIEQVGLGKFVDAYPHQLSGGMQQRVGLARAL
STGADILLMDEPFGAIDAQTRELMQEELMRICQREQKTVVFITHDLDEAVLLADRVLL
MSRGPGRVREVIDVDLPRPRFDYDVRGHASFIKVRGHLWHELRNDLVEQRAEEMS"
gene 33135..33890
/locus_tag="DSHI_RS21010"
/old_locus_tag="Dshi_4187"
CDS 33135..33890
/locus_tag="DSHI_RS21010"
/old_locus_tag="Dshi_4187"
/inference="COORDINATES: protein motif:HMM:NF012738.2"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/GO_function="GO:0022857 - transmembrane transporter
activity [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="WP_012187464.1"
/translation="MKARTRKQVRRDQLIGVAVFLVVWEITAQIIDRSLVLPPVTAIL
AALWDLILSGELIVALSQSIFLLIVGLFVATVIGFVLGALIARSRTAYWMLNPYLSAL
FVTPTIALVPLVLVWFGFGFPGRVIVVVLAAVVPILFSVASGLRDSPGDLIDVARSFG
VKGEIALLFKVRIRAALPVLLAGLRLAAGRGVVGMAVAETYLRLGGIGGLIKSYGAMF
QTDYVFASILPLSLLGIAMVSAIGWVERRLHWT"
gene 33904..34665
/locus_tag="DSHI_RS21575"
/old_locus_tag="Dshi_4188"
CDS 33904..34665
/locus_tag="DSHI_RS21575"
/old_locus_tag="Dshi_4188"
/inference="COORDINATES: protein motif:HMM:NF012738.2"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/GO_function="GO:0022857 - transmembrane transporter
activity [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="WP_012187465.1"
/translation="MMKTLSRPSVLLPLLSLVVVFGAWELVGRSINPLLFAPPSEVAR
QFGELMRSGELLDATKITVQALFLGYFLAVIVGIPFGIAMGALPRFGDILQPYLYAIF
STPRVVVVPLIVVWFGIGFEARLFLVFFWSMIAISVNTAQGVRHARPDLVEVAHSFQA
SRLQMARHVLIPGAIPFVVSGLRIGAERAIVGVIIGEMFLQIVGLGGVITKGSTELLP
AKMLCAVAVIAVLGTIIVTALDTFEKRFQVWKGPT"
gene 34761..35777
/locus_tag="DSHI_RS21020"
/old_locus_tag="Dshi_4189"
CDS 34761..35777
/locus_tag="DSHI_RS21020"
/old_locus_tag="Dshi_4189"
/inference="COORDINATES: protein motif:HMM:NF020650.2"
/GO_component="GO:0055052 - ATP-binding cassette (ABC)
transporter complex, substrate-binding subunit-containing
[Evidence IEA]"
/GO_function="GO:0140359 - ABC-type transporter activity
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ABC transporter substrate-binding protein"
/protein_id="WP_012187466.1"
/translation="MTLSKMTGSLLAGAGLAALLAGSATAKEFDLSGTEVTIGTAQAQ
VLNLGTLRMIEMLTEWGADVTRVELPNISGLEAIVADRIDIASRSSDEILAGQSRGVD
VVAFAAPISTMHYAVVSTPGIDSLEDLRGQSIATSGPGGFNGMLFRYMLTQAGLEPEV
DVAIVPVGGSSERAAAIMAGQVQATVVFIDNWLALREQGANAQLLGYVADLVPGLSSR
AVFAPRDYLAANEDLVTAIACANLEVNAWINSNKDDFVAYAMDNVRGANEDAVSAFYD
VAMEINMFPTAPRELLDVSGYQALADLMYAGGELDDQLDASGFVDFTYVDRAAEMGCG
TGAM"
gene 35941..37218
/locus_tag="DSHI_RS21025"
/old_locus_tag="Dshi_4190"
CDS 35941..37218
/locus_tag="DSHI_RS21025"
/old_locus_tag="Dshi_4190"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012187467.1"
/translation="MIGPKGTLIVSGRWDDNVAIVDIAQALLPENDGTPNAILSRPRA
TPDLDLDGDGVPDARASGQPVAVAVDVAARHAYVVCHSGDATPEGAAAYQHGHPGLVT
VLDVAAATDPAHDDTLGAVVEFVSTGRTGPVGCALTPDGRALLVNCGEAEGSEDGGDE
VTVIDVATRRVTARVPLALNPDHPARSPSPHDSPHESFGHYPNPTGIVISPRAGGVVF
VGNGGFSDVSVLDLKAALAGSAEAEINRVAVETGPFGMALSPDGALVAVASRESMSRP
TEGGTVSIIDVGRAAARRPDAELARIPVGGTTDEMPSRPFGVAFSQNGSRLVVSCFRT
NAISILDVAAACAGKACELHRLYPEAPGGATPRPRGIAVCGPYACVIGGAKEGARSSL
VWVVDIAAGTVVGTVTGVGNESYFLAAIPPPST"
gene 37297..38292
/locus_tag="DSHI_RS21030"
/old_locus_tag="Dshi_4191"
CDS 37297..38292
/locus_tag="DSHI_RS21030"
/old_locus_tag="Dshi_4191"
/inference="COORDINATES: protein motif:HMM:NF015445.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="TRAP transporter substrate-binding protein"
/protein_id="WP_012187468.1"
/translation="MTHLTRRTALGLATAALLVAGTASAQDTLELRMSVESTPGASTQ
QILAAFRDALQAEMGDAVAIEYFDSGTLGDEIVHMQQVRTGQLDVIPIGSDAVQLDPK
FAVFDIPFLFNSRDQVAAVLDGPIGAELDQSFQENAGLKVLGFGEIGFRHITNNVRPV
VTPADLEGLKLRTPGSSTRIMSFEMLGASPIKMNIGEVYLALQQGVIDGQENPFGNIA
KWSWDEVQKYISLSRHVYTPITLVMNLRTYEGLTDEQRDAVHAAARVAVDSSRAYGAE
NDASLEAVIRERSPDVELNEIDAASFRDVAKAIGAEIGKTAGEAFTARFVEAASQ"
gene 38385..38972
/locus_tag="DSHI_RS21035"
/old_locus_tag="Dshi_4192"
CDS 38385..38972
/locus_tag="DSHI_RS21035"
/old_locus_tag="Dshi_4192"
/inference="COORDINATES: protein motif:HMM:NF016200.2"
/GO_component="GO:0005886 - plasma membrane [Evidence
IEA]"
/GO_component="GO:0031317 - tripartite ATP-independent
periplasmic transporter complex [Evidence IEA]"
/GO_function="GO:0022857 - transmembrane transporter
activity [Evidence IEA]"
/GO_process="GO:0015740 - C4-dicarboxylate transport
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="TRAP transporter small permease"
/protein_id="WP_012187469.1"
/translation="MTQPDTDRDAEALAARLDQSARRMELADPDAGLGRLDRAINRVV
EAIGVLALVLIVGVVFANASARYLLNFSFTWAEELVQMTIPWLAMSGVFLSVRRGTVI
RIDFFYEKMPARLRPVVARAGLAFNCLVLAVMAYVSFDFVRLFGGDKTLYVGLPTGVS
TSALVFGAAGVAMAYAAAFVSAFLGRTTNRNGHTP"
gene 38969..40258
/locus_tag="DSHI_RS21040"
/old_locus_tag="Dshi_4193"
CDS 38969..40258
/locus_tag="DSHI_RS21040"
/old_locus_tag="Dshi_4193"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018389699.1"
/GO_component="GO:0005886 - plasma membrane [Evidence
IEA]"
/GO_component="GO:0031317 - tripartite ATP-independent
periplasmic transporter complex [Evidence IEA]"
/GO_function="GO:0022857 - transmembrane transporter
activity [Evidence IEA]"
/GO_process="GO:0008643 - carbohydrate transport [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="TRAP transporter large permease"
/protein_id="WP_012187470.1"
/translation="MTPLLGAGLSIVLLCGLLVFRIPMIVAIMSVVFFSNFMSGAWML
TLPQTMMSGISRFVLIALPLFVLAGGIMNAGGISGRLFEFARALVGSLRGGLAHVNVV
TSMFFGGMIGSSTADLAGTGSIVIPEMRKNGYPADFSAALTASSAGIGPMIPPSSPMI
LYSAMTGVSLGALFLAGLIPGLLLGFLLMLIVAWLAKRNRWEAYAAFSLSEVVRTGRR
AILSFGMPLIIVGGLVVGIFTPSEAGAFAVVYALVLATVVHRMLDFRGLYRVLANAVQ
LSGELLIIVGLSFALGSALTNARVPEFLVEFIDFATVIDSMYFRLLVLLALAILAGMI
LDPLIPVLMPIILPTLIFYEVDLVHFGVLMVIAVVIGQVTPPLAIALIIAGKIADIDQ
IRVMKANMPFFLGIVAFLLFAIAVPGLATWLPDLMRN"
gene complement(40279..41874)
/locus_tag="DSHI_RS21045"
/old_locus_tag="Dshi_4194"
CDS complement(40279..41874)
/locus_tag="DSHI_RS21045"
/old_locus_tag="Dshi_4194"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_005848685.1"
/GO_function="GO:0016787 - hydrolase activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="gamma-glutamyltransferase family protein"
/protein_id="WP_012187471.1"
/translation="MSLRHDALYASRRSPVLADNVVSTSHPLAAQAGLSMLARGGNAV
DAAIAAAAVLTVVEPTGNGLGSDAFCILWDGSELHGLNASGAAPAGWTPERFAGLDAI
PFRGWESVTVPGAVSAWAELAGRFGTLDLPTLLAPAIGYAEDGFVVTPVIGELWARGA
EMLSAQPGFAANFMPGGRAPRAGERYRNPDHARTLQTIAESGGRAFYEGVLAERIAAF
AAEHGAALSAADLAAHRPEWCGTISGGFDAQELHEIPPNGQGIAAIMALGMLEQTGIR
DLGPDDPRALHLQIEAIKLAFADLYRYVADGRWMAQVTAADLIDRGYLAERGRLIDPE
RAQEHGPGAPKHGGTVYLSTADASGMMVSFIQSNYSGFGSGVVVPGTGISLQNRGAGF
SLEPGHPNEVGPGKRPFHTIIPGFLMQDGAPRMSFGVMGGPMQAQGHVQMVLRTRLWG
QDVQTAVDAPRWRFVAGAEVACEEALPAPTRARLTEMGHRISVEPPDSAFGFGGAQLI
ARLDGGGYAAGSDPRKDGQAVGF"
gene complement(41874..43385)
/locus_tag="DSHI_RS21050"
/old_locus_tag="Dshi_4195"
CDS complement(41874..43385)
/locus_tag="DSHI_RS21050"
/old_locus_tag="Dshi_4195"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007088644.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="tripartite tricarboxylate transporter permease"
/protein_id="WP_012187472.1"
/translation="MEAFMLGAAEVLSLTTLAMMLAGAIAGIIAAAIPGFTVTMAIVL
TLPLTFTMDPLQGISVMLSVYVGGYTGGLISAALLGIPGTPSSVATTFDAFPMARGGE
PGRALSLGVWASFFGTVISTAVLIVAAPPLAVFAVRLGPWEYFSLIVFALTIVASLVG
NSLQRGLIAALIGLAISTIGADPIMGRPRFDMGWELLRAGLPFLVVLIGIFAISQLAS
EVEDAKAIKRGEKLVDGDIDFKTWSVMREVLSRPVNLVRSSMVGVAIGALPGAGGSIA
NLVAYDQAKRASKTPEAFGTGTPDGIVASESGNSATAGGGLIPLISLGIPGSAVDAIL
MASLMVHGISVGPRLIMDNADLVYGMFIAMAVSSLMMLVVCVVSMRAFLRVAEVPKWV
VVPVVLVCCVVGSFALNNRVTDLYLLAAIGLVGYALKALDYPLAPLVLGVILGPIAET
NLRRALMTDADWTLFLTRPVSLIFLVAAVLSVAWAIRGILKARNQADPGKDPA"
gene complement(43389..43895)
/locus_tag="DSHI_RS21055"
/old_locus_tag="Dshi_4196"
CDS complement(43389..43895)
/locus_tag="DSHI_RS21055"
/old_locus_tag="Dshi_4196"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008191458.1"
/GO_function="GO:0005215 - transporter activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="tripartite tricarboxylate transporter TctB
family protein"
/protein_id="WP_012187473.1"
/translation="MSGTDRQPTAQSGEVARLLSYIALLAVSVGLFIEARAIPTSRFE
VLGAGAFPMLVHGCLSLLLIGSIAGSLRKLPGDAYGRFVSDVLLWVRTRRLVIVLFVC
LGVYVLSMPVLGYPVATFFFLLVLQVTLAPKTRLAFGIALALALIFSFGLNWLFAEVF
NVFLPRGG"
gene complement(43895..44845)
/locus_tag="DSHI_RS21060"
/old_locus_tag="Dshi_4197"
CDS complement(43895..44845)
/locus_tag="DSHI_RS21060"
/old_locus_tag="Dshi_4197"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_005848679.1"
/GO_component="GO:0042597 - periplasmic space [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="tripartite tricarboxylate transporter substrate
binding protein"
/protein_id="WP_012187474.1"
/translation="MSLVTRALAGAGLVLASLALPASAQDYPTKPVEFIVPWSPGGGS
DTLMRIVANNVTPFLGAEMPIINMPGVGGTVGLTEASRRDADGYTISQVHEGLLTATA
TGLTELKWNDFDPIALLTASPQYLVAAADQPFDTMEGLVEYAQANPGTLTIGVTLGGV
PHLHAAMIAEAFDLDWRYVGYEGTGERIRAVVGGNLDLAIGDISSSLQFAENGDLVFL
ATGSTERMPQTPDVPTFMELGKDLDLSVTRGIVMPAGAPEEAQATLEKALMELSQDAA
FVEQINNAGADVAFRGREDYAAYLTTLGETVDRLSEVIAP"
gene 44991..45887
/locus_tag="DSHI_RS21065"
/old_locus_tag="Dshi_4198"
CDS 44991..45887
/locus_tag="DSHI_RS21065"
/old_locus_tag="Dshi_4198"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008195543.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="WP_245533104.1"
/translation="MQTLVAVADTGSFAAAAGVVNLTPSAISQQIQSLEAEIGAQLFD
RKKRPRQLNAQGEELVRAARSVVQTLTEARMTIAGGRTAGVLKLGAIRTVSMRLVPEA
LRGMRGRYPDLGFEMTVGMSERLMADVAAGRLDAALVAEHVGVPATLSWSPVLNEPLV
IIAPPQEAWRSEVSLLRDLPFIRYATDVPLARQIETELSGLSIVPREVAVANTMPAVV
GLVQAGLGVAVVPRIATLHGGPALHCRPFRDGAITRRVGLVQRQVSSRSRVLTELREI
LSEVALHRGLVLDPTPGRPGAA"
gene complement(45953..46597)
/locus_tag="DSHI_RS21070"
/old_locus_tag="Dshi_4199"
CDS complement(45953..46597)
/locus_tag="DSHI_RS21070"
/old_locus_tag="Dshi_4199"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_005859930.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_function="GO:0003700 - DNA-binding transcription
factor activity [Evidence IEA]"
/GO_process="GO:0006355 - regulation of DNA-templated
transcription [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="TetR/AcrR family transcriptional regulator"
/protein_id="WP_012187476.1"
/translation="MNTEAKAGQAAFDSAATRQRLPPKERREQIVAEAVRFFADVGLD
GNTRDLAKRLGVTQSLLFRYFSTKDELLEAVYGTVYLDRLSPDWPERLCDRGVPLRAR
LIAFYSEYSALIFQREWMRIFMFSGLAGAALNRRYLEHLGEVILGPLLEETARLTRTA
RRPIMEDVWDLHGGIVYIGIRQHIYSMPAPDDPEEAIARAIDKYLAAFGIGPQD"
gene 46743..47576
/locus_tag="DSHI_RS21075"
/old_locus_tag="Dshi_4200"
CDS 46743..47576
/locus_tag="DSHI_RS21075"
/old_locus_tag="Dshi_4200"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007803811.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="xanthine dehydrogenase family protein subunit M"
/protein_id="WP_012187477.1"
/translation="MKASAGGYARANDLREALDLLANADGQGRVLAGGQSLIAAMNMR
LSTGDMLVDISRIAELAGVAEDGETLRIGALTRHAAVGADPLVKTHVPLLAEATGHIA
HAAIRNRGTIGGALSHADPAAEFPACALALGASMEIAGPDGSRTVAAEDFFEDVFTTA
LAEGEILTALTVPKQRPGEAQLIEEVARRSGDYALVGLCLVKRDAGHRVALFSVGATP
ILARACMARLDAGDLDGAVTALQGEIDPPSDTQASAAYRRHLAGVLLRRAMARLTGVP
A"
gene 47573..48073
/locus_tag="DSHI_RS21080"
/old_locus_tag="Dshi_4201"
CDS 47573..48073
/locus_tag="DSHI_RS21080"
/old_locus_tag="Dshi_4201"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007803810.1"
/GO_function="GO:0046872 - metal ion binding [Evidence
IEA]"
/GO_function="GO:0051536 - iron-sulfur cluster binding
[Evidence IEA]"
/GO_function="GO:0051537 - 2 iron, 2 sulfur cluster
binding [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="(2Fe-2S)-binding protein"
/protein_id="WP_012187478.1"
/translation="MTEMFRDKIDVEITVNGEPVEARVPAGQHLIDFLRQTVGLTGAH
ASCEHGVCGACTVEVDGASVRGCLMLAAQADGAEVWTVEGLTERGRIADLQAAFIAHN
ALQCGFCTPGMLVACDELLRRGGTPSRAEIREHLSGNYCRCTGYEAIVDAVETVAKAR
AGKGAA"
gene 48070..50451
/locus_tag="DSHI_RS21085"
/old_locus_tag="Dshi_4202"
CDS 48070..50451
/locus_tag="DSHI_RS21085"
/old_locus_tag="Dshi_4202"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007803808.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="xanthine dehydrogenase family protein
molybdopterin-binding subunit"
/protein_id="WP_012187479.1"
/translation="MTIQFGNPDRPNSYIGKTVPRPNAAKLVQGRGQYVDDITLPRMV
HVAFVRSPFAHAQITGIDAAEALATKGVLRVFTGADLAEVCTPWVAVLAHLKGLKSPP
EHPIAIDRAVWVGEPVAAVVATSRAAAEEGAALVEVDYDPLPAVTDTMTALDADTPVI
HPDLGDNLAFRRLHEEGDVDAAKAAAHKVVTARFRTARHTGVTLEPRSILVDWNPAEG
QMTAYHATQAPHMMQSVLAKHLDIPESRVRVICGDVGGSYGIKVHVYPDEVATAAIAK
VMGRPVKFIADRLESFTTDIHARDHEIEASIAVDADGKILAIDVNDWTGIGPYSVYPR
TSAIEGNQVVNLCGGPYDFANYRARTSVVFQNKTPTCQYRAVGHPIAVAITEGLVDMA
AAELGMDPVEIRRRNMYADDAYPVTSPAKMKFEGLSHHASMDKLMAMMDYDALRADQA
EARKAGKLRGLGIASFIELTNPSPFMYGIGGARISAQDGCTVRMDPDGSVVALSGVTE
QGQGTEAMLSQVVAEGVGVPPSQVRVITGDTQVTPYGGGTWASRGAGIGGEAALQAAK
ALRDSILQVAAAMLQAAPDTLDIRDGQVVDAATGAERMPLAELGRIVYFRGDTLPKDL
PRELVQTRHFITMDYPFAFTNGVQASYLEVDPETGVVTLLKHWCVEDCGRVINPQLVD
EQIRGGIVQGLGGALYEEIHYDADGQLLNGSMADYLVPMAAEMPDMQIAHVETPTGES
ELGAKGAGEAGTAGAPAAVMNAINDALRPLGAQVTEMPFTPERILRAMGKIEG"
gene 50499..51551
/locus_tag="DSHI_RS21090"
/old_locus_tag="Dshi_4203"
CDS 50499..51551
/locus_tag="DSHI_RS21090"
/old_locus_tag="Dshi_4203"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_009515214.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="C4-dicarboxylate TRAP transporter
substrate-binding protein"
/protein_id="WP_012187480.1"
/translation="MKLTAITTTTALLLGSAAMAQQTITINIGSSHPEANIWVYAMKN
TFQPEVNRILSEAGGDYQVNWSENYAGTLYKFTDTREAVMDGIVDIGMVGTVWEGANM
PLQNVTYFTPFATEDHRMLIEIFDDLSQSLPELRDSWSENGMVHLSSLITDSYDIYAT
FPVTSMEDLQNRKLNAPGTSANWLRETGATPVDGALTTYYTNIQTGVTEGTLSFASGI
LPTRVYEVAPELTRVGIGSMYFGGIAANEDFFNGLPEPVQTALREAAQATSIAHGDYV
ADLAARALEEMQAAGLTIHELPAEEKAKWVESLPNIIEPWLEQTGEAGKTVLKAYFDA
LRERGATPARDWDAGL"
gene 51618..52199
/locus_tag="DSHI_RS21095"
/old_locus_tag="Dshi_4204"
CDS 51618..52199
/locus_tag="DSHI_RS21095"
/old_locus_tag="Dshi_4204"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007803805.1"
/GO_component="GO:0005886 - plasma membrane [Evidence
IEA]"
/GO_component="GO:0031317 - tripartite ATP-independent
periplasmic transporter complex [Evidence IEA]"
/GO_function="GO:0022857 - transmembrane transporter
activity [Evidence IEA]"
/GO_process="GO:0015740 - C4-dicarboxylate transport
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="TRAP transporter small permease"
/protein_id="WP_012187481.1"
/translation="MPPPPAPSDDTPELRETGFVPAFADAPYGAVLGSVAAAMSAVGT
AAIGALMVLIVADVVGRNFLNMPITGVSEIAARTVVAIVFLQVPAAILQCRLTRADFL
IRRIERLSPRAVALMESLFCLAAAIVFALVLWASWPKLLSSWQSAEFFGVQGVWTIVT
WPFRAITVGGATIAVLAALYRASVELRRIGAPA"
gene 52196..53524
/locus_tag="DSHI_RS21100"
/old_locus_tag="Dshi_4205"
CDS 52196..53524
/locus_tag="DSHI_RS21100"
/old_locus_tag="Dshi_4205"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007803802.1"
/GO_component="GO:0005886 - plasma membrane [Evidence
IEA]"
/GO_component="GO:0031317 - tripartite ATP-independent
periplasmic transporter complex [Evidence IEA]"
/GO_function="GO:0022857 - transmembrane transporter
activity [Evidence IEA]"
/GO_process="GO:0008643 - carbohydrate transport [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="TRAP transporter large permease"
/protein_id="WP_012187482.1"
/translation="MTTLAFGFVLIGVLVGLVLMGMHIAIALFGVAFVGIWLIRDNID
LAFRMLELTAYSGIADYLFATIPLFVLMGLLVSVSNVGRDTFQVAEELLRRMICGLGV
ATVAANTIFAAVTGVSIASAAVFTRVAVPEMTRHGYRPAFSAGTVAGSSVLGMLIPPS
LLLIIYGILAEVSIGGMFLAGILPGLMLAGGFVVMLIGLTLAFPRFVLADPDAVKARK
RDTDLTPMPAREMIAKLTPIVLLVILVLGGLYTGFFTPTEAGGIGAFGALIVALSRRS
LDRHKLWQVMKQTGVISVSILLLLVAASFYSRMLAIAGLPNAITGLVTDSGFGPLGFL
FFYAVIILLMGMILDSTSILLIMVPIAAPIAQGMGIDLMHFGIVTVLAVEIGLLTPPF
GISVFTVHNTLNDPDVSVESIFAATLPFIAVMLLVLVIVALVPTTATLFL"
gene 53586..54509
/locus_tag="DSHI_RS21105"
/old_locus_tag="Dshi_4206"
CDS 53586..54509
/locus_tag="DSHI_RS21105"
/old_locus_tag="Dshi_4206"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011455973.1"
/GO_function="GO:0003824 - catalytic activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="aminotransferase class IV"
/protein_id="WP_012187483.1"
/translation="MDTHTTHDALEDPRNADIRIYINGALKHRSEAMVSVYDSGFMLG
DGMWEGLRLYDGVWAFLDDHMDRFYNSCKAVSLDVGMDRAALFDALETTRRANDMHTD
VHCRLMLTRGVKVRPFQHPALSRSGPTLVILMEHSKPVDRLHDKGIRLATVPQVRGLP
MSQDAKYNSHSKLNCVIACLQAEQAGADEALMLDPHGFVNTTNACNFFIVRKGEVWTS
TGDYCMNGVTRQKVIDLCRANGIPVREKNYSLYEAIGADEAFLTGTFGAQTPVASIDG
KPIGDGTRPVTARIQALYKALIRDHVAAHST"
gene 54580..55551
/locus_tag="DSHI_RS21110"
/old_locus_tag="Dshi_4207"
CDS 54580..55551
/locus_tag="DSHI_RS21110"
/old_locus_tag="Dshi_4207"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013960645.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="alpha/beta hydrolase"
/protein_id="WP_012187484.1"
/translation="MLFITNRFPTQSIRTRAGRRFTFDLRNNASSNSVYYCESGRDDA
HTELGSATFLERVKASNYQQILLYVHGFSNLPDVVLERARQLQEYCDAAKPGEVLVIA
LIWPCDDDRGIVEDYWDDQKSADLSGYSFARVLERFLEWRAQDAAAEDATPCLKRINL
LAHSMGNRVLRASLATWDRYDLASGVPLIFRNTFMVAADVVNETLHEGHSGELIAHAS
RNVVVYYASDDLALRASKAANLKNKVASRRLGHTGPEDIRKTPRNVFQVDCDDINTRY
DRPMGHSYFLADPETLGAGLVFSHIFRCIEIGRVFPDDMDQRSDRLS"
gene complement(55567..56109)
/locus_tag="DSHI_RS21115"
/old_locus_tag="Dshi_4208"
CDS complement(55567..56109)
/locus_tag="DSHI_RS21115"
/old_locus_tag="Dshi_4208"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_005979050.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012187485.1"
/translation="MRALIAALLLAGTPLAAQETVQRLLELPAHRSLMAKVAEGPLAP
FTTDGCSGGLSTSWEVVADLFPNFAGAHAETPPWEACCVTHDRAYHAAGGAREAEASF
VARRDADAALRACVIAEGAGRRAALAARYDVPPERIAQAYRAIAESMYTAVRFGGGPC
SGLPWRWGYGYPNCLPVSLD"
gene complement(56106..57956)
/locus_tag="DSHI_RS21120"
/old_locus_tag="Dshi_4209"
CDS complement(56106..57956)
/locus_tag="DSHI_RS21120"
/old_locus_tag="Dshi_4209"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013964053.1"
/GO_function="GO:0008081 - phosphoric diester hydrolase
activity [Evidence IEA]"
/GO_process="GO:0006629 - lipid metabolic process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="glycerophosphodiester phosphodiesterase family
protein"
/protein_id="WP_012187486.1"
/translation="MIREVLDHYRSAVAMLAPLLTIHVFLRLVFLALILPLIGLLLAL
TLQFSDQTALTDQDIARFLLTPAGALGALVIGSALVAALILDVAVMTATLRSRRTNAL
GALREGIGFTLSKGLVLVQVAGGLLLRVLLLSLPFLVVGGGLFLTQLTEFDINYYLTE
RPPEFTRTVVMIGGVLGLLALLVLERLTGWALVLDMVLFDRQPIGTAFRDSRRLMAGH
KLALLRAVALWLGLRLAVAAGISAGLALGLQLTSGAFRQDLTTAALAVMGVMVVALLA
TTVLNAVSNGALAALLNDLFERAGGGTEHSLGPQEADEGPLGGKVVAGLAVAGVVAVG
VIGGAAALSEGIRAETEVAVIGHRGAAGARPENTMASVLKAIEDGADWVEIDVQETSD
GAIVVAHDSDFMKAAGNPIKVWDATLADLAEVDIGSWYDPAYAGERVPLLRDVLLAAK
DRARVIIELKYYGHDVDLENRVISIVEETDMADQIATMSLSYPAVQKMRDLRPDWRTG
VLAATALGDLSGLEGDFLAVSVATASPGLVARAEDAGKQVYAWTVNDALSMSRMISMG
VHGLITDEPALARQVIAEHAELPAIARLALWVSESFGVALDRLTGVEVTQ"
gene complement(58042..58482)
/locus_tag="DSHI_RS21125"
/old_locus_tag="Dshi_4210"
CDS complement(58042..58482)
/locus_tag="DSHI_RS21125"
/old_locus_tag="Dshi_4210"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003608677.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type II toxin-antitoxin system VapC family
toxin"
/protein_id="WP_012187487.1"
/translation="MIILDTNVVSELMRPAPSEAVLAWFRDTPPEPLALTAVTVAELR
YGIAALPEGRRKAGLAAAVTEMLTRDFPGLVLPFDQAAAEVYGAFAARHRGAGRSPGQ
ADVMIAAIAGAHGAGVATRNLRDFEGLDLRLMDPFAAKPGAGQG"
gene complement(58479..58724)
/locus_tag="DSHI_RS21130"
/old_locus_tag="Dshi_4211"
CDS complement(58479..58724)
/locus_tag="DSHI_RS21130"
/old_locus_tag="Dshi_4211"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011141676.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012187488.1"
/translation="MPTLTVRNIEPELHDFLRQEAARHGRSMEAEVRALLRARMAAEG
RSPRDVAESIRTRFAGLDGGLDLPERPRLGAPVDLDA"
gene complement(58898..60001)
/locus_tag="DSHI_RS21135"
/old_locus_tag="Dshi_4212"
CDS complement(58898..60001)
/locus_tag="DSHI_RS21135"
/old_locus_tag="Dshi_4212"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_020043035.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ParB N-terminal domain-containing protein"
/protein_id="WP_012187489.1"
/translation="MAKRRRLETPSAEDLTKIADEIRAETPLRPAAPIAQVAADAASL
ASTMPPQARAEAAQDKADAERLRAAQADGLLLAEVPTAEIDADAMVRDRMVLNDEELT
ELRLSIAENGLRLPIEVFELSEPRDGRRFGLLSGYRRLMAYRGLAELNPKGRYRAIKA
VVRPRQAIDKAYAAMVEENEVRAALSHYERGRIAVIAANQGAFTNVEEAVERLFSSAS
RAKRSKVRSFAIVFEELGDMLAFPEALTERRGLQLATALRAGAERRIREVLEAGAAKT
PEEEWAFLDAVISEIEEGPRTAKRGGRPKLSVPAAGWHGRDTLQTSTGVTIRRETDGR
GHILRLEGKRVTPDAIETIMLQIRDLLEAEDKL"
gene complement(59994..61394)
/locus_tag="DSHI_RS21140"
/old_locus_tag="Dshi_4213"
CDS complement(59994..61394)
/locus_tag="DSHI_RS21140"
/old_locus_tag="Dshi_4213"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018001450.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="AAA family ATPase"
/protein_id="WP_012187490.1"
/translation="MPPTGKTPLPPYTNLDPEAAARKLSDPIDTARFAKAAAFAAKGR
DDLARRGYAPDGQKRLRRFSTWEVCRYLIPVAPAHFRRVLKAHPDLPQGTGEGGSKWF
TLEEVLTLRDHFDAEGVATREYRPWRPEGLPAKVIAVANFKGGVGKTSTAAHLAMSAA
LDGYKVLVVDLDSQGSMTSIMGGKVADEWQTAFPLIAKDYAQAVQAENTVRAAAGQPP
LPFDETLTEALKVSPRDVIQSTHWPNIDLIGAQLNLYWAEFQVPVWRMQLRSWPLWDG
LTNALDSARLLDEYDIVLLDTPPALGYLTINALAAADILLVPLGASFLEFDSTGRFFD
MLYSTFASIEDGENAARRRDGLPEMRFEWDAVRALITRFDANQQTDLANVIQAYFGDF
MTTYRQDYTAMVGQAGEQVNGIYEADYRDFNRDTYIRGRETFDRTWAEVKDILLGTWW
RDLQMAEAARQETSHG"
gene 61901..63073
/locus_tag="DSHI_RS21145"
/old_locus_tag="Dshi_4214"
CDS 61901..63073
/locus_tag="DSHI_RS21145"
/old_locus_tag="Dshi_4214"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013368559.1"
/GO_function="GO:0003887 - DNA-directed DNA polymerase
activity [Evidence IEA]"
/GO_process="GO:0006270 - DNA replication initiation
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="replication initiation protein"
/protein_id="WP_012187491.1"
/translation="MAEGPSSTRLTGALKRGSVKKNVAAIHVSGKLTLLQRKLSNVLL
LNAYDTLTTRSQHAIDARTLCQMIGYNSNDMETLKTALRGLAETVAEWNMLDAAGREE
WGVSSLLSYAKLKDGVCEYGYSAALAEKLHDPKVFALINLDIQRRFTSGHALALYENC
FRFVRTGSTGWWSLELFRRLMGVDDSDYYKSFKHLNAKIIKPAVAEVNRTSDILVTPE
TRKQGRQVAEIRFRIARNPQLSILNIDDGGAVRAGPVYARLRALGVGDRLARQWIAEH
GEAAVAAKIAYVDGRDGVRSPVGYLTAALQEGKTPVEEPVSAPEPGSRAEQLRRVQEI
IARRSPTQRDADRRLFMSQLDSAEARTDFERHGWMSPLNAKAILAFWQELQPDAFG"
gene 63131..63772
/locus_tag="DSHI_RS21150"
/old_locus_tag="Dshi_4215"
CDS 63131..63772
/locus_tag="DSHI_RS21150"
/old_locus_tag="Dshi_4215"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007814457.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF3047 domain-containing protein"
/protein_id="WP_157865463.1"
/translation="MTYRALIIALALTAATPGLAQQIPFDGSWREQGFLRLFTNDFVQ
KGGSLDVISDGTVSLLWRAVPEGARDAGKAAWQWAVSEGVGPTDLARKGGDDRNLALY
FVFTDPQTAATVDVNSARKLLQADGTRALVYVWGGDATAGTVLPSPYHPGLVTVIKRG
PGTGQFSESVDLRADYRRAFGAEAPVLVGLGVSADSDDTDGRIAARVSGLRLD"
gene 63812..65134
/locus_tag="DSHI_RS21155"
/old_locus_tag="Dshi_4216"
CDS 63812..65134
/locus_tag="DSHI_RS21155"
/old_locus_tag="Dshi_4216"
/EC_number="2.7.-.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013960670.1"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/GO_function="GO:0016301 - kinase activity [Evidence IEA]"
/GO_process="GO:0016310 - phosphorylation [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="AarF/ABC1/UbiB kinase family protein"
/protein_id="WP_012187493.1"
/translation="MTKYIHEPRGLAVPNSRAGRMARLGGMAAGVAGNMAFEGGRQLL
SGQRPRMEDLLLTPGNAARITAQLAQMRGAAMKVGQLLSLEGGDFLPPELAEILGHLR
ADAHFMPPKQLDSVLKRHFGPGYRGRFAKFDVRPVAAASIGQVHRAVTKDGRDVALKV
QYPGVRESIDSDVRNVGSLLRLSGLVPKEIDLAPLMEEARRQLHEEADYGREAEMLSR
FGGLLAGDDRFVVPELYADLTTRDVLGMSFVESVAIEGQGDAPQKMRDRLMESLISLM
LRELFEFGLMQTDPNFANYRVQPETGRLVLLDFGATRVFGPDLVGQYRGLMRAGFAGD
RGAVNAAMEEIGFLEPETEARHREPILDMVEMAMAPLRAAAPFDFAGTGLARDLRRAG
EEFAEGRDFWVIPPMDALYLQRKMGGMFLLGARLRAHVALRPLLEPYL"
gene complement(65138..66145)
/locus_tag="DSHI_RS21160"
/old_locus_tag="Dshi_4217"
CDS complement(65138..66145)
/locus_tag="DSHI_RS21160"
/old_locus_tag="Dshi_4217"
/inference="COORDINATES: protein motif:HMM:NF012742.2"
/GO_function="GO:0000976 - transcription cis-regulatory
region binding [Evidence IEA]"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_function="GO:0003700 - DNA-binding transcription
factor activity [Evidence IEA]"
/GO_function="GO:0043565 - sequence-specific DNA binding
[Evidence IEA]"
/GO_process="GO:0006351 - DNA-templated transcription
[Evidence IEA]"
/GO_process="GO:0006355 - regulation of DNA-templated
transcription [Evidence IEA]"
/GO_process="GO:0045892 - negative regulation of
DNA-templated transcription [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="LacI family DNA-binding transcriptional
regulator"
/protein_id="WP_012187494.1"
/translation="MPDGDSRPTLKHVAARAGVSLISASRVMRGAPNVSEALRAKVEA
AAADLGYSRNRIAGSLRSQASDLIAVIVPSMSNHVFPPIVDGIDTALRGSRFRPVLGM
TGYETSMEETILRDLLSWTPAAVILSGLEHSPGTRALLRRHDGPVIELLDTDAPPIDL
SVGVSQAAAGRMMAAHLIDRGYSRIGFVGAWGGRDTRATKRQDALARAVAAAGLAPLA
QHIADAPSSLCVGADALRALRRAHPELDAVVFANDDLALGALFACQSDGIAVPDTLAL
AGFNGLDMCQVITPRLTTIQTPRFEIGQQAGTLLRDRLSGKDTPPPAPLPLHLVAGET
T"
gene 66272..67225
/locus_tag="DSHI_RS21165"
/old_locus_tag="Dshi_4218"
CDS 66272..67225
/locus_tag="DSHI_RS21165"
/old_locus_tag="Dshi_4218"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008236123.1"
/GO_component="GO:0042597 - periplasmic space [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="tripartite tricarboxylate transporter substrate
binding protein"
/protein_id="WP_012187495.1"
/translation="MKILTVTAMLAASVAMTGTALADDFPQRPINLIAPFNAGGGTDL
LLRGFAPHFAEAIGGDAFVSNMAGGSGTVAAGALAGQRPDGYQLGYFSITVSTIQPQI
KDVPYDVDSWTPICSVAASPTLLFTTADSPYTTIEEAVAAIEAEPGKLIYGSSGPGAM
THLTTVAGFAGLGVLDKLKHLPFQGSGPAVQAMQAGTIQFFGDTEILMTRGDFRPLMV
FNDERLENYPDVPTAAEAGIEPPLNELYLWGGLFAPAGVEPEVVAKLEAACEAAVNSE
GFQEFAANTATVIDYRGAEEFEAFFRAQYEANGALIEAAGL"
gene 67292..67747
/locus_tag="DSHI_RS21170"
/old_locus_tag="Dshi_4219"
CDS 67292..67747
/locus_tag="DSHI_RS21170"
/old_locus_tag="Dshi_4219"
/inference="COORDINATES: protein motif:HMM:NF018979.2"
/GO_function="GO:0005215 - transporter activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="tripartite tricarboxylate transporter TctB
family protein"
/protein_id="WP_012187496.1"
/translation="MGRIMSERALVSVALLLVGAGLMLSTFGLQFAELGGAFSPMFFP
RIVLMMWVGLALLNVVADVMAQPAPQPIRLATVAAIGLGVLVYVIALPEIGFFFASVP
LALGMLWLLEVRSPVALVGIAVGVPGALVVLFNHVLTMPLPASPFLWWI"
gene 67749..69233
/locus_tag="DSHI_RS21175"
/old_locus_tag="Dshi_4220"
CDS 67749..69233
/locus_tag="DSHI_RS21175"
/old_locus_tag="Dshi_4220"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_005029895.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="tripartite tricarboxylate transporter permease"
/protein_id="WP_012187497.1"
/translation="MIELLPQAFALLLSPQGLLVLSVGTMLGIVLGALPGIGSTVAVA
MILPFTLTMDQAPAILLLLAIYAGSVYGGSISAILINTPGTPQSAATCLDGFPMAQRG
EAGKALGWATIASVVGGLTSAVVLIFAAPQLAAFALNFGPIETFALILLGLTCIVSVS
EGSLVKGLMAGMLGIFLSTVGGDPITGEARFTFGQFQLIAGFNLLAVVIGVFALSEVL
IRASSGPDSTGVLVDFKGIVLPRWAEWKGRLRGLAKSVAIGNGVGILPGTGAATAAFI
SYAEARRSAPTRANFGKGEPDGLIASESANNAVTGGALVPTMALGIPGDAITAVMLAT
LTLHGVTPGIRLMQDNPVLMASIFAGFFIINLMLLPLGMLVSKLAAPLLRMREAYMLI
VITLLCTVGVFFVRGNPFDLLVMAGAGIVGFVLRRQGYPMAPLVIGMVLGPTLELSLR
QGLIITDGNFGAFFTGHPIALGLTIAAAGMLSLPLIRALRSKGA"
gene 69235..70116
/locus_tag="DSHI_RS21180"
/old_locus_tag="Dshi_4221"
CDS 69235..70116
/locus_tag="DSHI_RS21180"
/old_locus_tag="Dshi_4221"
/EC_number="1.1.1.411"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008192297.1"
/GO_function="GO:0050661 - NADP binding [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="L-threonate dehydrogenase"
/protein_id="WP_012187498.1"
/translation="MSDVAIIGLGSMGYGMAQSLLRAGLRVYGADIAPEPMARFRAEG
GLAARPEAVDILVIAVLNAAQTEAVLFGAEGWISTLRKGGVVIACATVPPRFARDMAA
RCAEAGVQYLDAPISGGAAKAAQGRLSIMASGGAEAFAAAAPALDAMAETVFELGDAP
GAGSAMKAINQMLAGTHIAAMAEAVTFGMTQGVDPAKTVEVISRCAGTSWMFENRAPH
IVEGDYTPRSSVNIWPKDLGIVLDIAAEAKFAAPLTAAALQQFMAAAGSGLGGEDDAA
VAKVYARNAGLTLPGEG"
gene 70201..70617
/locus_tag="DSHI_RS21185"
/old_locus_tag="Dshi_4222"
CDS 70201..70617
/locus_tag="DSHI_RS21185"
/old_locus_tag="Dshi_4222"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012187499.1"
/translation="MSLHAVQTPAELRPARAPERPVSALSETGRARLAALREAARVAR
ARPYRSLEATCLSERGRTDPYESLVECLPEAVARPLVIYRGAEDSLSFDEAWILTMLE
RIDSTDWDSLHFLIARRVCRPFRVAVRVLLGACQDG"
gene 70690..71160
/locus_tag="DSHI_RS21190"
/old_locus_tag="Dshi_4223"
CDS 70690..71160
/locus_tag="DSHI_RS21190"
/old_locus_tag="Dshi_4223"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008232096.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DNA starvation/stationary phase protection
protein"
/protein_id="WP_012187500.1"
/translation="MTQTAVALSQDAQAAIADALNQSVAETTVTTMMAQNFHWNVTGM
AFGPLHQLFQDIYEDHFQAQDDLAERIKAIDAHAEGTLAGMLKRSKVTEHDGHADAKT
MIETMKVAQETLAATLAGCGELAAEHGDTLTEDLCIARGQTHEKFAWFLRAHLR"
gene complement(71161..71427)
/locus_tag="DSHI_RS21195"
/old_locus_tag="Dshi_4224"
CDS complement(71161..71427)
/locus_tag="DSHI_RS21195"
/old_locus_tag="Dshi_4224"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011456394.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF1289 domain-containing protein"
/protein_id="WP_012187501.1"
/translation="MAKTPSPCISVCKFKRQGHCIGCSMTKAQKSLYKGLKKESHKQA
FVDMLVKQQAALGKYRHWTAAYMRKCLKKKAKPVPAVRDAAKAA"
gene complement(71437..71592)
/locus_tag="DSHI_RS22125"
/old_locus_tag="Dshi_4225"
CDS complement(71437..71592)
/locus_tag="DSHI_RS22125"
/old_locus_tag="Dshi_4225"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_014537955.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hemin uptake protein HemP"
/protein_id="WP_012187502.1"
/translation="MPSQTITPDKDTVPVFDARDLLGPNLRAFLRLDDQTYTLRMTRN
GKLILTK"
gene 71714..72295
/locus_tag="DSHI_RS21200"
/old_locus_tag="Dshi_4226"
CDS 71714..72295
/locus_tag="DSHI_RS21200"
/old_locus_tag="Dshi_4226"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011047259.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="rhodanese-like domain-containing protein"
/protein_id="WP_012187503.1"
/translation="MVLRVLLIFLLCLPGPVLAGSSAEAMAKRPELFDPATGYRIDRQ
RAPTPEDIPPPARLVDTEEAAALIAAGALVLDVYGASQSRFDELDGTWLVSQQRLSLP
GALWLPETGRGWLEPVLQTYLVDNLARATGGDMARPIVVYCIADCWMSWNAAQRIAAL
GYEAVYWYRLGTDGWLDAGRALFPVDPVPVNVE"
CONTIG join(CP000835.1:1..72296)
//
