LOCUS NC_017122 182940 bp DNA circular CON 25-MAR-2023
DEFINITION Acetobacter pasteurianus IFO 3283-07 plasmid pAPA07-020, complete
sequence.
ACCESSION NC_017122
VERSION NC_017122.1
DBLINK BioProject: PRJNA224116
BioSample: SAMD00060945
Assembly: GCF_000010865.1
KEYWORDS RefSeq.
SOURCE Acetobacter pasteurianus IFO 3283-07
ORGANISM Acetobacter pasteurianus IFO 3283-07
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales;
Acetobacteraceae; Acetobacter.
REFERENCE 1
AUTHORS Azuma,Y., Hosoyama,A., Matsutani,M., Furuya,N., Horikawa,H.,
Harada,T., Hirakawa,H., Kuhara,S., Matsushita,K., Fujita,N. and
Shirai,M.
TITLE Whole-genome analyses reveal genetic instability of Acetobacter
pasteurianus
JOURNAL Nucleic Acids Res 37 (17), 5768-5783 (2009)
PUBMED 19638423
REMARK DOI:10.1093/nar/gkp612
REFERENCE 2 (bases 1 to 182940)
AUTHORS Azuma,Y. and Hosoyama,A.
CONSRTM Acetobacter pasteurianus genome sequencing consortium
TITLE Direct Submission
JOURNAL Submitted (06-APR-2009) Contact:Yoshinao Azuma Yamaguchi University
School of Medicine, Department of Microbiology and Immunology;
Minami-Kogushi 1-1-1, Ube, Yamaguchi 755-8505, Japan URL
:http://www.bio.nite.go.jp/dogan/Top
COMMENT REFSEQ INFORMATION: The reference sequence is identical to
AP011137.1.
This work was done by Acetobacter pasteurianus genome sequencing
consortium including Department of Microbiology and Immunology,
Yamaguchi University School of Medicine, National Institute of
Technology and Evaluation, Genetic Resources Technology, Faculty of
Agriculture, Kyushu University, Department of Biological Chemistry,
Faculty of Agriculture, Yamaguchi University and Mizkan Group
Corporation Central Research Institute.
The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Date :: 03/25/2023 11:18:04
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 6.4
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA
Genes (total) :: 3,126
CDSs (total) :: 3,050
Genes (coding) :: 2,939
CDSs (with protein) :: 2,939
Genes (RNA) :: 76
rRNAs :: 5, 5, 5 (5S, 16S, 23S)
complete rRNAs :: 5, 5, 5 (5S, 16S, 23S)
tRNAs :: 57
ncRNAs :: 4
Pseudo Genes (total) :: 111
CDSs (without protein) :: 111
Pseudo Genes (ambiguous residues) :: 0 of 111
Pseudo Genes (frameshifted) :: 30 of 111
Pseudo Genes (incomplete) :: 91 of 111
Pseudo Genes (internal stop) :: 15 of 111
Pseudo Genes (multiple problems) :: 22 of 111
CRISPR Arrays :: 1
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..182940
/organism="Acetobacter pasteurianus IFO 3283-07"
/mol_type="genomic DNA"
/strain="IFO 3283"
/sub_strain="IFO 3283-07"
/sub_species="pasteurianus"
/db_xref="NBRC:105187"
/db_xref="taxon:634454"
/plasmid="pAPA07-020"
/note="strain coidentity: IFO 3283 = NBRC 3283"
gene complement(join(<182822..182940,1..571))
/locus_tag="APA07_RS14550"
/pseudo
CDS complement(join(<182822..182940,1..571))
/locus_tag="APA07_RS14550"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012812390.1"
/note="incomplete; partial in the middle of a contig;
missing C-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS1380-like element IS1380A family transposase"
gene 680..973
/locus_tag="APA07_RS14555"
/old_locus_tag="APA07_41810"
CDS 680..973
/locus_tag="APA07_RS14555"
/old_locus_tag="APA07_41810"
/inference="COORDINATES: protein motif:HMM:NF025080.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="WP_012813237.1"
/translation="MDLFSDRTSSHTIRANQLRLWFSAAAYVLLTALQRLALGQTSLE
TATCGTIRARLLKIATRVTLSVRRIVLSMPDMFPCQHEFALAHARLRRLRQAI"
gene complement(1139..1738)
/locus_tag="APA07_RS14560"
/old_locus_tag="APA07_41820"
CDS complement(1139..1738)
/locus_tag="APA07_RS14560"
/old_locus_tag="APA07_41820"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813238.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_function="GO:0004519 - endonuclease activity [Evidence
IEA]"
/GO_process="GO:0006304 - DNA modification [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type I restriction endonuclease"
/protein_id="WP_012813238.1"
/translation="MSFLSENEIEDWACDILRECGYTIAWGPDIAPGGKKPERASLSD
VVLEKRLRTTINKLNPHLPQASKDEALLALMREDTPDHVDENRRLHDYLVNGVPVDVV
RKDGTQSGDRVRLLDFENPENNDFLVVRQFVVEKDEANRRPDLVLFVNGMPLGVVELK
SPSSESATLDSAWNQFQTYRSFIPSLFRFNEALTRISHT"
gene complement(1735..2307)
/locus_tag="APA07_RS17050"
CDS complement(1735..2307)
/locus_tag="APA07_RS17050"
/EC_number="3.1.21.-"
/inference="COORDINATES: protein motif:HMM:NF013579.2"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0006304 - DNA modification [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="restriction endonuclease subunit S"
/protein_id="WP_082179786.1"
/translation="MCNGGTPKRTKSSYWENGDIPWLTSGEVRKQYISETENHITNEG
LENSSAKWIPAGSIVIALYGATAGEVGLTATKMTTNQAISSLIPKGIGKSYIFLHMLH
SKVNLANKATGSAQQNLSKNLIETFETLIPNDKILYEFENKTSLLFDKIIKNFDEPHI
LAQLRDLLLPKLMSGEISIRDAEKMVEDAA"
gene complement(2326..3122)
/locus_tag="APA07_RS14570"
CDS complement(join(2326..2783,2783..3122))
/locus_tag="APA07_RS14570"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_076611628.1"
/ribosomal_slippage
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="programmed frameshift; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/codon_start=1
/transl_table=11
/product="IS5 family transposase"
/protein_id="WP_082779839.1"
/translation="MEEGDRTGTFTDETWAIWEPLIEEVRPRGKTPPHDLRRTIAAIF
WRHENGAKWRSIPAELGPWWRAAQLFIRWAKLGVWERLLALVQEQQGVAFGMTFLDGT
NIRAHHKAAGAPKKGASFEERDHREALGRSRGGYGTKVCVIADGHGKAFGFALAPGQA
HELPLAPAMLDSLPATPLWVVADKGYASNAMRERIWDMGARPAIPAKRRDGPVACPKW
AYRCRHLVENLWARLKEWRAVATRYEKTATSFLAVIHIAAAADWIKP"
gene complement(3144..3893)
/locus_tag="APA07_RS14575"
/old_locus_tag="APA07_41860"
CDS complement(3144..3893)
/locus_tag="APA07_RS14575"
/old_locus_tag="APA07_41860"
/EC_number="3.1.21.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813240.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0006304 - DNA modification [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="restriction endonuclease subunit S"
/protein_id="WP_250698453.1"
/translation="MKNGRPVLYPTYVMLMEASKLVLYGTQLHASDYVTSGVPCIMPQ
DIIDGKISTGKIAYISEENANRLSNFRLAQNDIIYPRRGDITKHALITSRENGWLCGT
GCLRIRLNTSSILPQYLYYYLTLPHVKEWISQNSVGATMPHLNTSLVGQISVSYPTYD
EQHTIASILGSLDDKIELNRRTNETLEAMARALFRDWFVDFGPTRAKMAGEAPYLAPE
LWELFPGRLDNEGKPEGWKIGELHELGPVRS"
gene complement(3925..4245)
/locus_tag="APA07_RS14580"
/old_locus_tag="APA07_41870"
CDS complement(3925..4245)
/locus_tag="APA07_RS14580"
/old_locus_tag="APA07_41870"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_006115724.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="nucleotidyltransferase domain-containing
protein"
/protein_id="WP_006115724.1"
/translation="MTGLIEITPEERAIVLRILNEIVPDREVRAFGSRVTGKAKLFSD
LDLAIMGDEPLLLETRARLEEAFSESELPWKVDVLDWALADKMFQDIIMKTSLVFRKQ
QKRF"
gene complement(4242..4643)
/locus_tag="APA07_RS14585"
/old_locus_tag="APA07_41880"
CDS complement(4242..4643)
/locus_tag="APA07_RS14585"
/old_locus_tag="APA07_41880"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813241.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="nucleotidyltransferase substrate binding
protein"
/protein_id="WP_012813241.1"
/translation="MLYLTPLERALNRLKEGWTRHLAHPDDEQLRDGLIQRFEFTYEL
SHKTLKRFLETNSASPDEYDRMGFPDMIRSANEAGLLKSAWPQWSVFRKMRNLTSHTY
NEATAKQVVATIPDFIVEAEFLLVTLKERTT"
gene complement(4643..6256)
/locus_tag="APA07_RS14590"
/old_locus_tag="APA07_41890"
CDS complement(4643..6256)
/locus_tag="APA07_RS14590"
/old_locus_tag="APA07_41890"
/EC_number="2.1.1.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_006115727.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="class I SAM-dependent DNA methyltransferase"
/protein_id="WP_012813242.1"
/translation="MSRGRPRKNPDAASAPKKTTKARKAKAATATLGFEQQMFLAADK
LRKNLEPSDYKHVALGLIFLRYISTAFEARHAELMLEDPEAAEDPDEYLAENIFWVPE
TARWSHLKDNARSANIGKMIDEAMLAIEKANPEQLKGVLPKDYGRPALDTVMLGELID
LISDIGMGDTDDKARDVLGRVYEYFLGGFAGAEGKRGGEFYTPSSVVRTLVSMLEPYK
GRVYDPCCGSGGMFVQSERFVETHGGKLGDIAIYGQESNHTTWRLARMNLAVRGIGAD
IRWNNEGSFLRDELKDLRFDYILANPPFNVSDWWNASLEEDPRWQYGKPPAGNANYAW
LQHILWHLAPDGTAGVVLANGSMSSNQNSEGEIRRRMVEADVVDCMVALPGQLFYSTQ
IPACLWFLTRTKNPKGWRDRRGEILFIDARKLGKLVDRTRRELTDEDVARIADTYHAW
RGEKNAGKYEDIPGFCKSATLDEVEQHGFVLTPGRYVGAEEAEEDSVPFTERFAALEK
TLKEQFAQGETLNAKITASLKLIVQKESV"
gene complement(6781..7854)
/locus_tag="APA07_RS14595"
/old_locus_tag="APA07_41900"
CDS complement(6781..7854)
/locus_tag="APA07_RS14595"
/old_locus_tag="APA07_41900"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010511738.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="alkene reductase"
/protein_id="WP_012813243.1"
/translation="MTSLFEPIELGSIYAKNRILMAPLTRGRGTRDHVPTPIMAEYYA
QRAGAGLIISEATGISREGLGWPYAPGLWSQEQVEAWKPITAAVHAKGGKIVAQLWHM
GRMVHSSVTGQQPVSCSATKAPEALHTYDGKQAPEVARPLTKEDIARILNDYENAARN
ALQAGFDGVQIHAANGYLIDEFLRDGTNHRSDEYGGSPENRIRFLREVTERVIATIGA
HKTSVRLSPNGDTQGCIDSHPEQVFVPAAKLLNDLDIAFLELREPGPNGTFGKSDQPK
LHGPIREVFRKPLVLNQDYTREEAIETVATGVADAISFGRPFLANPDLVRRLEDNLPQ
NKDDIRTWYSQGAEGYTDYPLAR"
gene 8112..9362
/locus_tag="APA07_RS14600"
/old_locus_tag="APA07_41910"
CDS 8112..9362
/locus_tag="APA07_RS14600"
/old_locus_tag="APA07_41910"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012812328.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS701-like element IS1452 family transposase"
/protein_id="WP_012812328.1"
/translation="MIQDMMSGGTSVEETLELWARSLRSAKDRMAPLFTQKRVVDSAC
AFLDVLIGNEPRKTGWMRAEAAGDPGPWRQQALLGRGHWDADALRDVVRDYVIEHLGT
EEGVLVIDETGFLKKGQASCGVGRQYTGSAGKITNCQIGVFGAYVSERGHAFIDRALY
LPKDWTSKPERLKRAHVPDDVVFATKPALASMMIERSIEAGVPFRWVAADSVYGVGDV
ERTLRRAGIGYVLGVKGNHWFGSWATEPLIAGEAKDIAAGLPDQAWRRLSAGHGTKGE
RLYDWAYLPLADLDAEEFDCPIAGPWTRGLLIRRNIADGDLAYFTTWSPKGTTTQELV
NVEGTRWRIEEGFETAKNEFGLDHNETRSWHGWHRHVSLVMLAYAVMASVRYQANSLK
PKKTQLRTRQSLSAGPFRRSGASS"
gene complement(9486..>10502)
/locus_tag="APA07_RS14605"
/old_locus_tag="APA07_41920"
/pseudo
CDS complement(9486..>10502)
/locus_tag="APA07_RS14605"
/old_locus_tag="APA07_41920"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_014457375.1"
/note="incomplete; partial in the middle of a contig;
missing N-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="outer membrane beta-barrel protein"
gene complement(10687..12071)
/locus_tag="APA07_RS14610"
/old_locus_tag="APA07_41930"
/pseudo
CDS complement(10687..12071)
/locus_tag="APA07_RS14610"
/old_locus_tag="APA07_41930"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012812390.1"
/note="frameshifted; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS1380-like element IS1380A family transposase"
gene complement(<12162..12650)
/locus_tag="APA07_RS14615"
/old_locus_tag="APA07_41940"
/pseudo
CDS complement(<12162..12650)
/locus_tag="APA07_RS14615"
/old_locus_tag="APA07_41940"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_014457375.1"
/note="incomplete; partial in the middle of a contig;
missing C-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="hypothetical protein"
gene complement(12977..13897)
/locus_tag="APA07_RS14620"
/old_locus_tag="APA07_41950"
CDS complement(12977..13897)
/locus_tag="APA07_RS14620"
/old_locus_tag="APA07_41950"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019088058.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="WP_041633333.1"
/translation="MKFSLRQIEYFVATAELGSIVQASRQIPISQPAISAAIAHLESV
FGVSLFIRHHAQGLSLTAEGRLVLQEARTLLLHAQELGTSLNGMLKRVQGEVRVGCMT
TLFPLLAPDLIQNFSAAYPEARLRVIAGHHEELIDKLRNGEISVMIGYNMTLPPMIGF
QPLSALPPYVFTSSDHPLAAKECVRLQDLADEPFLLLDLPFSKEYFLQLFASAGITPC
IAGHYPSMDVIRSLAARGVGFGLGNARPRNQQALDGKSLAYLTLEDECAPLLYGLFTI
VDQKFPFRVSAFLDMCEQDLSGKPLPGTLN"
gene complement(13998..15152)
/gene="argE"
/locus_tag="APA07_RS14625"
/old_locus_tag="APA07_41960"
CDS complement(13998..15152)
/gene="argE"
/locus_tag="APA07_RS14625"
/old_locus_tag="APA07_41960"
/EC_number="3.5.1.16"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_006117386.1"
/GO_function="GO:0008777 - acetylornithine deacetylase
activity [Evidence IEA]"
/GO_process="GO:0006592 - ornithine biosynthetic process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="acetylornithine deacetylase"
/protein_id="WP_006117386.1"
/translation="MTSMYDLSVQDILSQLVAFPTICRTENQNLIDWVEEFLRACGAR
CLRVPGEQAGRFNLLASIGPDTPDGIVLSAHSDVVSVEGQPWKTAPFTLTAYDGNLYG
RGTSDMKGFLACMLVAARYAAQKTTLRAPLHLAISYDEEIGCVGVHSLLRSLAVHKFQ
ARGCVIGEPTNLHVVSGHKGKLAARIVCHGLAAHSANPARGSNAILLASDMVQAIKFL
QDELQNNGAQDENFEVPYNTLQVGLIQGGVALNIVPDLCEVHFEMRLLPGVDPALYIE
RLKQEGARLCTTYPSARIEIETLNTYPGLNTRDGTPFLQEIMAITGDNAPSYIGFGTE
GGLFKEYLDIPVVVCGPGSIDRAHKADEFIRLDELSAGVQFVEKIVEKLL"
gene complement(15149..16765)
/locus_tag="APA07_RS14630"
/old_locus_tag="APA07_41970"
CDS complement(15149..16765)
/locus_tag="APA07_RS14630"
/old_locus_tag="APA07_41970"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_006117385.1"
/GO_function="GO:0016614 - oxidoreductase activity, acting
on CH-OH group of donors [Evidence IEA]"
/GO_function="GO:0050660 - flavin adenine dinucleotide
binding [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="GMC family oxidoreductase N-terminal
domain-containing protein"
/protein_id="WP_012813248.1"
/translation="MSGQNDFPTEFDFIIVGAGAAGCVLANRLSARSNLRVALLEAGQ
ADNTPRIHVPAGTISLYKSRKYTYQYYSTPQKYLNNRRIHVPRGRMLGGSSSMNSMIY
IRGARSDYDDWEAMGCTGWGYDAVLKYFMREENNHLHQDPHFHGTGGELVVDQPRDPL
GVSRLFIKAAEEVGLKENTDFNGAKLDGVGIYDVTQKDGKRLSAYRAFVAPVRSRPNL
HVVTGCKVVSLVTDGKEVQGVTIERNGQFHVLRARRETILSAGAIGSPHLLMSSGIGN
ARELLAAGVPVVADLPEVGRNLQDHVDGLVTIRSDSASTLGFSTASLSSVVPSPLQFL
LKRKGWLTTNYVEAGGFASTRYAKDVPDIQFHFVPGYRSHRGRLFEWGHGFALHTCVL
RPYSRGSIRLARDGSRNPDIDFNFLSDERDTHVLLEGVKLARSILRASPFDAIRGKEM
APTANIQTDDQLIEYLRASASTVFHPSGTCRMGADDTSVVTPDLKVRGLKGLRVADTS
IMPTLVSGNTNAPTMMIGDKASDMILADAV"
gene complement(16765..18159)
/locus_tag="APA07_RS14635"
/old_locus_tag="APA07_41980"
CDS complement(16765..18159)
/locus_tag="APA07_RS14635"
/old_locus_tag="APA07_41980"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003630594.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/GO_function="GO:0022857 - transmembrane transporter
activity [Evidence IEA]"
/GO_process="GO:0055085 - transmembrane transport
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="cytosine permease"
/protein_id="WP_003630594.1"
/translation="MTDTTTARGPEAHTIYQIPLDQRHGRPRDLFTVWFGSNIMMLTI
ITGALATTVFGLPFWPAMLSAVLGNMIGGLFMALHAAQGPQLGVPQMVQTRGQFGSVG
AMAVICLVVIMYVGFFASNLVLGGESLHTVATFLPEKTCVILLGLVSLIATIYGHDLI
HAYTRFMTVVSGIALVLCFVWILCINGVSSATLAHGTFTLSGFLGGLSTAALWQIAYA
PYVSDYSRYLPPGTGNRQAFMASYWGCVLGSLFPMILGALLGVIAGGGDVVATLTKEV
GPLALFIIPVLSLGIASTNAMNLYCGALSAITVIQTIFPSWKATHVGRAGTAVVLSGL
SLLIALGTEANFMEEYTNFILLLLYVMVPWTAINLADFYLIRHGEYDVASFFRADGGI
YGRYCWPALSAYVFGILIQIPFVSNGLYTGPIATMLGGADISWIVGLIFVTVFYVWLM
RHERHTQPVAGSAE"
gene complement(18281..18688)
/locus_tag="APA07_RS14640"
/old_locus_tag="APA07_41990"
CDS complement(18281..18688)
/locus_tag="APA07_RS14640"
/old_locus_tag="APA07_41990"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813249.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="Rid family hydrolase"
/protein_id="WP_012813249.1"
/translation="MAHTRLRPFNTKDTYPEQELDNDLCQAVITQNTIYLRGQVPQDL
DTRENVGVGDPAAQAEKVIDNIELLLSEAGAKLTDICKVTVYLTDIRYREATYRVLGR
RLKGVFPVFTGLVVVALARPEWLIEVDVIAERE"
gene complement(18826..20307)
/locus_tag="APA07_RS14645"
/old_locus_tag="APA07_42000"
CDS complement(18826..20307)
/locus_tag="APA07_RS14645"
/old_locus_tag="APA07_42000"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003630592.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="aldehyde dehydrogenase"
/protein_id="WP_012813250.1"
/translation="MKSLSYYTQRADALKFRNNCWIDGKFVPARSGKWFEDVNPATSS
ILTQVARGGAEDIDRAVKSARRAFEDGRWSRLTPSARKETLLRLAVLIREHLDEFALL
DTLDMGKPISETTNVDVPGAAQCLQWHAEAIDKLYDEVAPTGGRDVAMIRRIPLGVVG
AVVPWNFPLDIAIWKLAPALVTGNSVVLKPAEQSPLSALRLAELAAEAGLPDGVLNVV
PGLGEEAGQALGLHDDVDCLVFTGSTTVGKLFMRYAGESNMKQVWLETGGKSPNIIFP
DANLDVAADQAAFGIFFNQGEVCSANSRLLVHESIVDEMIERMRLRAEAIIPGNPLDP
DTKMGAMVDSRHAARVAEFLNSGRESSRLVAGGNRITVGASDAFIQPTVFADVPRNTL
IAREEIFGPVLAIQTFRDEEDALQLAHDTPYGLAASVWTRDIGRALDLSERLQVGTVS
VNTVDALSPMTPFGGVKQSGFGRDLSLHSFDKYTALKTVWIQY"
gene complement(20307..21566)
/locus_tag="APA07_RS14650"
/old_locus_tag="APA07_42010"
CDS complement(20307..21566)
/locus_tag="APA07_RS14650"
/old_locus_tag="APA07_42010"
/EC_number="1.14.13.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019088052.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="NAD(P)/FAD-dependent oxidoreductase"
/protein_id="WP_012813251.1"
/translation="MTIEKTEVLVVGAGQAGIAMSEHLRGYGIEHVVLERNRVAERWR
SCRWDSLVANGPAWHDRFPHLEFQHDGPDDFVPKERVADYLAAYAQKIDAPIRCGVEV
KEVRRNAGRLGFTVQTSEGVIEAKAVVAATGPFQIPVIPPIVPEASGIAQIHSASYRN
PEQLPEGAVLVVGAGSSGAQIAEELMRSGRKVYLSVGPHDRPPRHYRGRDFVWWLGVL
NKWDAEATPGVEHTTIAVSGANGGHTLDFRRLASEGMTLLGRTETFHDGVLTFAPDLA
ENIAKGDANYLSLLGEADTYVTRNGLDLPEEPTARDMLPDPECMKHPVLELDLQNAGI
NTIIWATGFGVDYSWLKVEALDEQGRPHHQRGVSAEPGIYFLGLPWQTRRGSSFIWGV
WHDAKYVADHIAKQRGYMAYKPSREEG"
gene complement(21626..22396)
/locus_tag="APA07_RS14655"
/old_locus_tag="APA07_42020"
CDS complement(21626..22396)
/locus_tag="APA07_RS14655"
/old_locus_tag="APA07_42020"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_006115463.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF1028 domain-containing protein"
/protein_id="WP_006115463.1"
/translation="MFRFGNDGGTVRSYLTPAVWLDYVSSERGSSMTFSIVARCPQSG
QFAVAVSSSSPSVAARCGFARAGVGAVTTQNVTDPRLGPWALDLLEAGASATEARDII
VRNCTFPHYRQMSLIDREGRTAVYTGSKALGLSTDLCGVNIASTGNLLASKCVVEAIV
RSFEQSEKSKELGARVIVAMKAGLAAGGEAGPVRSAGLQVVAQEAWPLADLRVDWDEA
PITKLEELWTIWQPQMHDYVTRCLNPEVAPSYGVPGDE"
gene 23141..24228
/locus_tag="APA07_RS14665"
/old_locus_tag="APA07_42040"
CDS join(23141..23402,23402..24228)
/locus_tag="APA07_RS14665"
/old_locus_tag="APA07_42040"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012476889.1"
/ribosomal_slippage
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="programmed frameshift; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/codon_start=1
/transl_table=11
/product="IS3 family transposase"
/protein_id="WP_148194252.1"
/translation="MKSDRFTDAQIMGVIRQAEGGVPVPDLCREHGISNATFYRWRAK
YGGMDASMISQMKALEEENRRLKRMYADLSMQTDILKEALGKKLKRPAQRRELAAQAV
AHHGVSIALACRIFGISETCFRYRPRLAAENDRIADLLVGLTQAHRRWGFGLCFLYLR
NVQGQLWNHKRVYRIYREQELNLRIKPRRRLVREKPEKLSVPALPNRVWSMDFMADRL
MDGRAFRLLNILDDFNREGLAIEGDFSLPACRVVRCLEQVMEWRGRPEAIRMDNGPEY
VSHTLVSWAEKQGITLIYTQPGNPQQNAYIERYNRTVRQEWLEQYLFESIQDVQEVAT
QWLWTYNHDRPNMGNSGLTPAQKLKTAA"
gene complement(<24308..24439)
/locus_tag="APA07_RS16270"
/pseudo
CDS complement(<24308..24439)
/locus_tag="APA07_RS16270"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019086427.1"
/note="incomplete; partial in the middle of a contig;
missing C-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="nitrate reductase associated protein"
gene complement(24480..25454)
/locus_tag="APA07_RS14670"
/old_locus_tag="APA07_42050"
CDS complement(24480..25454)
/locus_tag="APA07_RS14670"
/old_locus_tag="APA07_42050"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813253.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ABC transporter substrate-binding protein"
/protein_id="WP_012813253.1"
/translation="MSTPLRIGVLKLADSAPVIMARQKGIFARYGLEVELVVSPSWAN
IADGLAWNRLDAAVIFAPLAIMTALGRRGHDTGLHPLGRISRGGNTIMLRGVNPISEP
WRKGEEGRKAFDIWQTVIGRKPRIAVVHMYSTHLLILRRFLKMIGIHMESQIELLVMP
PADMIHAFAEKAIDGACVGSPWGTEAERIGLAFRVGGSSTVLPNHLEKILVASGKLRN
LNDTARNLCLAIQDSLDFCQKSVHRMEIAQDLGRNVASGGLGLPMEATSTILPGGNAS
ETITFSGGSLVRSDLEWIISDMTDLGWLKTVRQQDLERWMTPTSMAPV"
gene complement(25451..26062)
/locus_tag="APA07_RS14675"
/old_locus_tag="APA07_42060"
CDS complement(25451..26062)
/locus_tag="APA07_RS14675"
/old_locus_tag="APA07_42060"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813254.1"
/GO_function="GO:0003723 - RNA binding [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ANTAR domain-containing protein"
/protein_id="WP_012813254.1"
/translation="MDEKISSTVHLKVLVADENPRRGQALSEVLYTDSSLDVQTVPCG
MALIDAVRDYGPDVVLVDMSRADRDALDSIRALSCSELERPVALFVDEDDVELMETAF
DTGICSYNVMEALPRDVKPLLRAAIALYARFRRTRDELSEAQRVLAERRIIEQAKRCF
MKNEKTSESQAYRWFQRRAMQTSSRIVAVAEKYLLSQKKDETS"
gene complement(26062..>29457)
/locus_tag="APA07_RS14680"
/old_locus_tag="APA07_42070"
/pseudo
CDS complement(26062..>29457)
/locus_tag="APA07_RS14680"
/old_locus_tag="APA07_42070"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010515345.1"
/GO_function="GO:0016491 - oxidoreductase activity
[Evidence IEA]"
/note="incomplete; partial in the middle of a contig;
missing N-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="molybdopterin-dependent oxidoreductase"
gene complement(29466..30262)
/locus_tag="APA07_RS14685"
/old_locus_tag="APA07_42080"
CDS complement(join(29466..29923,29923..30262))
/locus_tag="APA07_RS14685"
/old_locus_tag="APA07_42080"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_076611628.1"
/ribosomal_slippage
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="programmed frameshift; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/codon_start=1
/transl_table=11
/product="IS5 family transposase"
/protein_id="WP_197051022.1"
/translation="MEEGDRTGTFTDETWAIWEPLIEEVRPRGKTPPHDLRRTIAAIF
WRHENGAKWRSIPAELGPWWRAAQLFIRWAKLGVWERLLALVQEQQGVAFGMTFLDGT
NIRAHHKAAGAPKKGASFEERDHREALGRSRGGYGTKVCVIADGHGKAFGFALAPGQA
HELPLAPAMLDSLPATPLWVVADKGYASNAMRERIWDMGARPAIPAKRRDGPVACPKW
AYRCRHLVENLWARLKEWRAVATRYEKTATSFLAVIHIAAAADWIKL"
gene complement(<30300..30884)
/locus_tag="APA07_RS14690"
/old_locus_tag="APA07_42100"
/pseudo
CDS complement(<30300..30884)
/locus_tag="APA07_RS14690"
/old_locus_tag="APA07_42100"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010667597.1"
/GO_function="GO:0016491 - oxidoreductase activity
[Evidence IEA]"
/note="incomplete; partial in the middle of a contig;
missing C-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="molybdopterin-dependent oxidoreductase"
gene complement(30892..33789)
/gene="nirB"
/locus_tag="APA07_RS14695"
/old_locus_tag="APA07_42110"
/pseudo
CDS complement(30892..33789)
/gene="nirB"
/locus_tag="APA07_RS14695"
/old_locus_tag="APA07_42110"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019088893.1"
/GO_function="GO:0008942 - nitrite reductase [NAD(P)H]
activity [Evidence IEA]"
/GO_function="GO:0016491 - oxidoreductase activity
[Evidence IEA]"
/GO_function="GO:0050660 - flavin adenine dinucleotide
binding [Evidence IEA]"
/GO_function="GO:0050661 - NADP binding [Evidence IEA]"
/GO_process="GO:0042128 - nitrate assimilation [Evidence
IEA]"
/note="internal stop; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="nitrite reductase large subunit NirB"
gene complement(33819..35474)
/locus_tag="APA07_RS14705"
/old_locus_tag="APA07_42130"
CDS complement(33819..35474)
/locus_tag="APA07_RS14705"
/old_locus_tag="APA07_42130"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813259.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="alginate export family protein"
/protein_id="WP_012813259.1"
/translation="MTRIFFSSHSASFSTASVAMLAGLCLHQTAWADNAQPANKQTTN
AQVLAKSTIMPALKQKAPYSNSTPHSPDWGVFNTGKGVASGFGIIGGPGQPRWAEDWS
DLATMSPAKRRADWFNRLKYIPLTDNGDIWLSINGEERLRYIFENQPMMGTAGKTNAN
RVLLRNQYGADLHIGEHIRAYAEFLWGVAGGSNYYGYQTGVQRERLDLQQGILEVKGN
LLGAKMGAIGGRQVFLDAPLSMQSSRDLTNAQQTWDGFRGYAVWKSFRMDLFDFMQTN
KLPRNVFADGTNYNARMYGIYTSTALPNFTVMGQKSQIFADVFFIGYLFNGTPAAIST
TTGTQSGSTRRDNVGSRIWGNVGPFNVSLTGVFQGGEFRPAASQGATRAVRACAVNGV
FGWTAKNLKSAPSFSLQADMFSGGSYHSKDGAVGTFATPYFPFPYYNDVTLALTSQNL
IGVGPVITATPVPHLLLKLHVPVFWRESTQDAVYGTGKIYSWRNNLSGGFIGATPQTQ
IAWNFAPHWTWTHDIAGFVASNGMRQAGAKDGAFYMQTMEFKF"
gene complement(35508..36718)
/locus_tag="APA07_RS14710"
/pseudo
CDS complement(35508..36718)
/locus_tag="APA07_RS14710"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_006115458.1"
/note="frameshifted; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="NarK/NasA family nitrate transporter"
gene complement(37202..37906)
/locus_tag="APA07_RS14715"
/old_locus_tag="APA07_42160"
CDS complement(37202..37906)
/locus_tag="APA07_RS14715"
/old_locus_tag="APA07_42160"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_006115457.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="VIT family protein"
/protein_id="WP_012813262.1"
/translation="MENNILNSQKETHATSRLGWLRAAVLGANDGILSTSSLIIGVAS
AHAGRENILLAGISSLVAGAMSMAAGEYVSVSSQADSEKADLAREKQELGSSWDTEVG
ELADIYRQRGLDDALARTVAQQLMQHDALGAHARDELGISDATSARPIQAACASAGAF
SSGAILPVLAALLSSSSIVSWAVSAVSLISLALLGVVGARAGGAAPLRPTLRVIFWGI
VAMVGTTFVGKIFGGS"
gene complement(37963..39315)
/locus_tag="APA07_RS14720"
/old_locus_tag="APA07_42170"
CDS complement(37963..39315)
/locus_tag="APA07_RS14720"
/old_locus_tag="APA07_42170"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003626140.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="HAMP domain-containing sensor histidine kinase"
/protein_id="WP_012813263.1"
/translation="MKNWSLATRIVSGVLCVVTLSLLALSIAVAGFTRYEITERLDNS
LQEVSERLQAIITIQPHKAQSDNVAWVPDVGPRTLAYQVVDQSGHVVLRSQNAPVDPF
VPDIHTGFSNTPLFRVYIAAPTATAYRVLVGEPTLHRRGATWRATAMAVLPILIFLPV
IWVLVRLIVRRALRPLNRLHDEMQSRGSGNLSPISSLDLPVELVSIQHAVNTLLSRLK
TALSTERAFAASAAHELRNPLGALLAQVQMLGRMLPEGSSANKRVEIIADRTQRLART
VEKLLQFSRASSGVAFRRDRFDLLAVLYVLVDDLGHLPRDGRSINLKAKGIGHIFVYG
DMDATGILLRNLLENALLHGTSDMPVKVEVKPEGCIDVINDCPALAPDTLAQLTSPFV
RGGSSSNGSGLGLAIASNIARQMDARLQLQSPLTGSARGLSVSLCFPNPEIILLSEET
"
gene complement(39312..39983)
/locus_tag="APA07_RS14725"
/old_locus_tag="APA07_42180"
CDS complement(39312..39983)
/locus_tag="APA07_RS14725"
/old_locus_tag="APA07_42180"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_006115455.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="response regulator transcription factor"
/protein_id="WP_003626138.1"
/translation="MRILIVEDEHDLGAAVQERVRQDGHAVDWFMTLEDARAAVATVD
YDFMLLDLGLPDGNGRDLLREIRRTSFDTAILITTAEDQISDRIAGLSDGADDYIVKP
YDLNELVARIAAVARRYVAPRRQACYQMGEIVIDRENRSVTRNEMELELTAREWAIME
LLSRRPGRIYSRQQIDTALYALDQDVGSNTVEVFISRLRKKVGNTVIKTVRGRGYCLA
DRADA"
gene complement(39983..43057)
/locus_tag="APA07_RS14730"
/old_locus_tag="APA07_42190"
CDS complement(39983..43057)
/locus_tag="APA07_RS14730"
/old_locus_tag="APA07_42190"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813264.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/GO_function="GO:0051139 - metal cation:proton antiporter
activity [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="CusA/CzcA family heavy metal efflux RND
transporter"
/protein_id="WP_012813264.1"
/translation="MARKYLEALLRARMLVLGGLALILAAGMMAVLELPVEAVPDISP
KQVLVSVVAPGLATEEVEKLITFPVEASMTGIPGMTDLRSVSRGGVSVVYVQFADDTD
INLDRTRVNERIQQARGSISVPGITVSMGPLATGMGEIMQFQIKGAGRSLMELNRIMN
WTVVPQMRLVPGVVDVNVNGGAEETYEVALDPARLIASNLSVSEVYRAVDANNAASGG
GWITHHAEQQSVVGRGLISSLADFGNIAVRANADGSIIRLRDLGHITTGARTRLGAVT
RDGQGEIVIGVVMMESGASSNATLAAINRALPSIRQSLPTGVTLEPYYTRATLTGQTI
ATVRDNLLMGAVLVIAVLVVVMGSWQAALVIASVIPVALVCAMAGMRYFGISANLLSL
GAIDFGMIVDGSLVVIEHILSRREEEPEAAFMPLVVSSVQQVMRPVGFAILVIIMVYL
PILTLQGIEGHMFRPMAQTVIMALLASLAYCFICIPVIAALALARVRPKGDTWLIARL
RAPYVHLTEWGEAHPQLLFGGTLAVLVLSAGLATRLGGEFIPQLDEGALAVTTTRLPS
ASLETVLASVTRQEQILRGFPEVKTVVSNTGTSAIPTDPMGVNETDSFILLNPPSTWK
TARTQAGLVAAMDETLRRELPDALYSWSQPVQMRMDDLLSGVRTQIAVSIFGDDLATL
ATLGDKVVAAISSVKGAADVAAADDGSVPLVVVDIDRAQAASRNVAVQDILDTVEAIG
GHIGARPVIVGNAIISTQVRLNGRHVASAAAIAALPVRRMDGQGNVMLSQVAHVHEVD
GTPRISRDGVRRRMVVQANVRGRDLSSFVAEAQMRVAHDVHLPSGYTMQWDGQFRNLH
SAVQRLEIVLPIALGLIFALLVVTFGAIRPALLVFINLPVAATGGIMMLTLRGMPFSI
SAGIGFIALFGVAILNGVVLVSEIAALRARGMAVAQAAFAGAKSRFRPVMATALVASL
GFFPMAFSESAGAEVERPLASVVIGGLVTSTLLTLLVLPSLYARVMREEVQN"
gene complement(43057..44211)
/locus_tag="APA07_RS14735"
/old_locus_tag="APA07_42200"
CDS complement(43057..44211)
/locus_tag="APA07_RS14735"
/old_locus_tag="APA07_42200"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813265.1"
/GO_function="GO:0005215 - transporter activity [Evidence
IEA]"
/GO_process="GO:0006810 - transport [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="efflux RND transporter periplasmic adaptor
subunit"
/protein_id="WP_012813265.1"
/translation="MKGRILAYFAVCFCMSPLANAEDQILPSVVALDMAAIKNEGITV
TFAKSGKVSRILPVISRVMPDTTRLVYIHPAGSGKVLDVLVQPGASVRKGQVLLRYQD
HSLHGARLQAIQMRAALTAAIASRNNAAAAVQRAKQLVGQTLSLAELRRRQDILAQAD
ATMRARQADVDTLGHRFNEEFNSSSEQSSRKQQDEVSTLISPVDGMVQTLDTSVAADL
TPTTNVASVADLSDVWIVSDITPEQAARLQPGGLQTTETNDGAITSRIDTVDGMANPQ
TGLVRVISRVSNPTGVLVPGMVLDASLTERDSVTGMVVPSDAIQKIDVHNVVFVQIDK
THYRPVVVDVVLDNGMHAVVSSGLKEGEAVVSHGSFALKSIIGLAGMDAD"
gene complement(44208..45443)
/locus_tag="APA07_RS14740"
/old_locus_tag="APA07_42210"
CDS complement(44208..45443)
/locus_tag="APA07_RS14740"
/old_locus_tag="APA07_42210"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003626131.1"
/GO_function="GO:0015562 - efflux transmembrane
transporter activity [Evidence IEA]"
/GO_process="GO:0055085 - transmembrane transport
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="TolC family protein"
/protein_id="WP_006115452.1"
/translation="MREILLLSIVTFSFGIFSANAQNMPEKIDFHRAVNMAWAVDPVR
TELQVGHHSAKARSSAAGSWFAGGPTLSGEYMDDHAIGSNEGYTTYQGGVSVPLWLPG
QGSATRQVASAEAASLDEQLNVEYLSLSIRVLDGAAKAQIAQERLKAAHQLYEYASRI
NSLIAHSAHVGESSSSESQIAQSEMENARNEQALAQEYLENSQAELEVLFAQPVEVDL
SHGADMAHVRFVEPRDMEDNDPRVKAAHKNVEAAQANMKLARRSFMPNPELGIDVIHE
KQYGSPWDDRVGVNFSIPLPSEARNTPIMSEASNRLASANSQEIQARRMVHLEISRVR
ARLMAATAARQTTRIAAANMQKRAAAEEHAWRVGEATLETVMQAEQAACNAQFANARA
EVEWHVATLRMMIAMGITP"
gene complement(45462..45932)
/locus_tag="APA07_RS14745"
/old_locus_tag="APA07_42220"
CDS complement(45462..45932)
/locus_tag="APA07_RS14745"
/old_locus_tag="APA07_42220"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813266.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012813266.1"
/translation="MQRVIRYGLSILITLSLCGCVSYTETESICKGTEEGILLHIDGS
YAGYPHSVLRHAVLQSVACPTGETELQAFHAIAVPPPHMRVSIKRPAGQGRLGSLSVT
LFSQGRFVIGERMALTSFSRTQSPSSIKGDINLATVNLWNDLASRITHNKPIIP"
gene complement(46201..>46499)
/locus_tag="APA07_RS16275"
/pseudo
CDS complement(46201..>46499)
/locus_tag="APA07_RS16275"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003627302.1"
/GO_function="GO:0000150 - DNA strand exchange activity
[Evidence IEA]"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0006310 - DNA recombination [Evidence
IEA]"
/note="frameshifted; incomplete; partial in the middle of
a contig; missing N-terminus; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="recombinase family protein"
gene complement(46615..47865)
/locus_tag="APA07_RS14750"
/old_locus_tag="APA07_42240"
CDS complement(46615..47865)
/locus_tag="APA07_RS14750"
/old_locus_tag="APA07_42240"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012812328.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS701-like element IS1452 family transposase"
/protein_id="WP_012812328.1"
/translation="MIQDMMSGGTSVEETLELWARSLRSAKDRMAPLFTQKRVVDSAC
AFLDVLIGNEPRKTGWMRAEAAGDPGPWRQQALLGRGHWDADALRDVVRDYVIEHLGT
EEGVLVIDETGFLKKGQASCGVGRQYTGSAGKITNCQIGVFGAYVSERGHAFIDRALY
LPKDWTSKPERLKRAHVPDDVVFATKPALASMMIERSIEAGVPFRWVAADSVYGVGDV
ERTLRRAGIGYVLGVKGNHWFGSWATEPLIAGEAKDIAAGLPDQAWRRLSAGHGTKGE
RLYDWAYLPLADLDAEEFDCPIAGPWTRGLLIRRNIADGDLAYFTTWSPKGTTTQELV
NVEGTRWRIEEGFETAKNEFGLDHNETRSWHGWHRHVSLVMLAYAVMASVRYQANSLK
PKKTQLRTRQSLSAGPFRRSGASS"
gene complement(<47906..48498)
/locus_tag="APA07_RS14755"
/pseudo
CDS complement(<47906..48498)
/locus_tag="APA07_RS14755"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_004450096.1"
/GO_function="GO:0051537 - 2 iron, 2 sulfur cluster
binding [Evidence IEA]"
/note="frameshifted; incomplete; partial in the middle of
a contig; missing C-terminus; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="Rieske 2Fe-2S domain-containing protein"
regulatory complement(48825..49044)
/regulatory_class="riboswitch"
/inference="COORDINATES: nucleotide
motif:Rfam:14.4:RF00174"
/inference="COORDINATES: profile:INFERNAL:1.1.4"
/note="cobalamin riboswitch; Derived by automated
computational analysis using gene prediction method:
cmsearch."
/bound_moiety="adenosylcobalamin"
/db_xref="RFAM:RF00174"
gene 49327..50310
/locus_tag="APA07_RS14765"
/old_locus_tag="APA07_42260"
CDS 49327..50310
/locus_tag="APA07_RS14765"
/old_locus_tag="APA07_42260"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003618828.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF1852 domain-containing protein"
/protein_id="WP_041633342.1"
/translation="MIQESSFNIKRIHFDENYHPSDRTRLTTNFANLARGGSRQENLR
NVLRMIDNRFNGLAHWDNPLGDRYSVELEIVSVEMDLAFAAKNDSFPLIEVLYTTIVD
KKYNKRIEGLAGNSFSSYVRDYDFSVLLPKYNKDKVEFSVPHNYGDLHGNLFKSAVNS
TAYKKNFRKPPVICLSVSTNRTYHRTENQHPVLGVEYQQHEFSLTDQYFAKMGMKVRY
FMPANSMAPLAFYFSGDLLSDYSTLELVSTISTMESFQKVYRPEIYNANSAAAGCYQP
SLKHQDYSNTRIVYDREERNQLAVAQGKYTEESFIKPYHDILEQWSASYAA"
gene 50338..51366
/locus_tag="APA07_RS14770"
/old_locus_tag="APA07_42270"
CDS 50338..51366
/locus_tag="APA07_RS14770"
/old_locus_tag="APA07_42270"
/EC_number="2.1.1.13"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010973349.1"
/GO_function="GO:0003871 -
5-methyltetrahydropteroyltriglutamate-homocysteine
S-methyltransferase activity [Evidence IEA]"
/GO_function="GO:0008270 - zinc ion binding [Evidence
IEA]"
/GO_process="GO:0009086 - methionine biosynthetic process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="methionine synthase"
/protein_id="WP_012813270.1"
/translation="MKTLLPTSTAGSLPKPSWLAKPEALWSPWKLQGEELVEGKQDAL
RLTLDDQDRAGIDIVSDGEQTRQHFVTTFIEHLSGVDFENRQTVKIRNRYDASVPSVV
GTVTREMPVFVEDAKFLRTLTKKPIKWALPGPMTMIDTLYDIHYKSREKLAWEFAKIL
NQEARELEAAGVDIIQFDEPAFNVFFDEVNDWGIAALERAIEGLKCETAVHICYGYGI
KANIDWKNALGEEWRQYEEIFPKLQKSNIDLISLECQNSRVPMDLIELISGKKVMVGA
IDVATKTIETPEKVADILRKALKFIDADKLYPCTNCGMAPLPRDVARGKLNALGAGAE
ILRKELSV"
gene 51476..52402
/locus_tag="APA07_RS14775"
/old_locus_tag="APA07_42280"
CDS 51476..52402
/locus_tag="APA07_RS14775"
/old_locus_tag="APA07_42280"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813271.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="WP_052583250.1"
/translation="MGVLERSHLTIIQEVAREGSLTAAAVRLNLTQPALSHAIRKIEN
LLEVKIWRREGRSLVLTQAGEWLLSLANRLLPQFELAENRLQQFANGERGTLRVGMEC
HPCYQWLLKVVSPYLERWPKVDVDVRQKFQFGGIGALFSNEIDILVTPDPLYKPGLIF
TPVFDYELVLVVGPEHPLRGAKFVVPEQLAGETLITYPVPPERLDIYTQFLQPAGFGP
RQQKQIETTDIMLVMVAHGRGIAALPRWLVEEYRSRFELHPVKLGKKGIAKQIFLGRR
ETDEEIQYLRDFIECAGSPSSACRQLSPESGT"
gene 52463..53217
/locus_tag="APA07_RS16280"
CDS join(52463..52802,52802..53217)
/locus_tag="APA07_RS16280"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_076611877.1"
/ribosomal_slippage
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="programmed frameshift; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/codon_start=1
/transl_table=11
/product="IS5 family transposase"
/protein_id="WP_087651418.1"
/translation="MRRYSLRDDQWERIKDLLPGREGYVGGTAVNNRLFVEAVLYRYR
AGIPWRDLPARFGDWKNVHRRLRRWCESGVIERIFRYLAADYDNEYMMIDSTIVRAHQ
HSAGALKKGARNQAIGRSRGGLTTKIHAICDALGNPVELGITPGQDADITQAEPLLEN
IEPDAFLADKAYDADRLIDRLIQRGITPVIPPKRNRTTRRKTDFSLYRERNLVERFFN
KLKQFRAIATRYDKLKSTFLAAVQFASIIILLN"
gene complement(53360..53656)
/locus_tag="APA07_RS14790"
/old_locus_tag="APA07_42310"
CDS complement(53360..53656)
/locus_tag="APA07_RS14790"
/old_locus_tag="APA07_42310"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_006115735.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="helix-turn-helix domain-containing protein"
/protein_id="WP_006115735.1"
/translation="MSTYDSILQGLNEALAYSEAQVQNSVTHKVRVLSVNVAAIRTRT
GLSQAQFAKSIGVAKGTLLNWEHGRRQPTGPAQVLLAMLDKRPSLVSELLPAAR"
gene complement(53653..53994)
/locus_tag="APA07_RS14795"
/old_locus_tag="APA07_42320"
CDS complement(53653..53994)
/locus_tag="APA07_RS14795"
/old_locus_tag="APA07_42320"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015075038.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type II toxin-antitoxin system RelE/ParE family
toxin"
/protein_id="WP_012813272.1"
/translation="MSKLQTVVELPEFIKRAKALMSDDDRMALINTLAAMPDSGVSLG
GGLRKIRFAREGSGKRGGYRTLYVFGGRHMPLFLLTVFAKNEKDNLSRSEQAALVDLS
KTLIAKYGEPS"
gene complement(54308..55387)
/locus_tag="APA07_RS14800"
/old_locus_tag="APA07_42330"
CDS complement(54308..55387)
/locus_tag="APA07_RS14800"
/old_locus_tag="APA07_42330"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003618723.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ArsO family NAD(P)H-dependent flavin-containing
monooxygenase"
/protein_id="WP_012813273.1"
/translation="MAEQFDVVIVGGGQAALAASYFLRRTGLTYVILDNGTQAGGAWV
HGWDSLHLFSPASYSSLPGWPMPDTPDGSYPTRDEVLDYLHRYEARYAPPIHRPVMVG
RVERTDQKFLNVRTSVGDFVSRAVIGATGTWSAPFIPDYPGRELFVRTQIHSSHYCNA
LPFAGQRLLVVGGGNSGAQIMAELSLVAQATWVTQHDPVFLPDDVDGRVLFERATARV
LGGPSAMPTGGFGDIVMVPPVRAARERGVLHAVRQFVRMTATGVVWPDGREEAIDAII
WCTGFRPALSMFAPLDVIEPDGLIRVNGQQAVREPRLWLLGYGSWCGPASATLLGAGR
VARSMVRQLAAWLASPAQGVRLPKP"
gene complement(55396..56094)
/gene="arsH"
/locus_tag="APA07_RS14805"
/old_locus_tag="APA07_42340"
CDS complement(55396..56094)
/gene="arsH"
/locus_tag="APA07_RS14805"
/old_locus_tag="APA07_42340"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003618725.1"
/GO_function="GO:0003674 - molecular_function [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="arsenical resistance protein ArsH"
/protein_id="WP_012813274.1"
/translation="MTEPDLPALHPEYLERVDLARLEPQPRVDHPPRILLLFGSLRPR
SFSRLLVLEAERILKVLGAETRVFDPTGLPVADSVPATHPKVQELRDLSIWSEGQVWC
SPERHGNITAVFKNQIDWLPLSEGAVRPTQGRTLAVMQVSGGSQSFNSVNALRVLGRW
MRMFTIPNQSSVPMAYTQFGDDDRMKPSPLYDRMVDVMEELMKFTWLLRDRADYLVDR
YSERKAEFRLPESL"
gene complement(56118..57413)
/locus_tag="APA07_RS14810"
/old_locus_tag="APA07_42350"
CDS complement(56118..57413)
/locus_tag="APA07_RS14810"
/old_locus_tag="APA07_42350"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_006115732.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="arsenic transporter"
/protein_id="WP_006115732.1"
/translation="MLALLIFVATLVFVIWQPRGLGIGWSAMAGAAVALAAGVIHWHD
IPVVWHIVWDATFTFIALIVISLLLDEAGFFHWAALHVVRWGKGRGRTLFPLIVVLGA
AIAAVFANDGAALLLTPIVIAILTQLRLSHGAALAFIIATGFVADTTSLPLVISNLVN
IVSANFFGIAFDRYAAIMVPVDLVALGATLAVLWLWYRRQVPATYPVAELPAPAAAIR
DHHVFRAAFPLLVLVLAAYFLTAPFHIPVCVVACLAAGILLLVAGYGRVIPVRKVLRG
APWQIVIFSLGMYLVVYGLRNAGLTDYLATALVWLGHQGTFTATIGTGFLAAVLSSIM
NNMPSVLVGALAIQQAHDITPLTRDLMIYANVIGCDLGPKFTPIGSLATLLWLHVLAS
RNHRVTWGQYMKVGLAITPPVLLVTLAALSLWLPWISHS"
gene complement(57413..57835)
/gene="arsC"
/locus_tag="APA07_RS14815"
/old_locus_tag="APA07_42360"
CDS complement(57413..57835)
/gene="arsC"
/locus_tag="APA07_RS14815"
/old_locus_tag="APA07_42360"
/EC_number="1.20.4.1"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_006115730.1"
/GO_function="GO:0008794 - arsenate reductase
(glutaredoxin) activity [Evidence IEA]"
/note="This arsenate reductase requires both glutathione
and glutaredoxin to convert arsenate to arsenite, after
which the efflux transporter formed by ArsA and ArsB can
extrude the arsenite from the cell, providing resistance;
Derived by automated computational analysis using gene
prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="arsenate reductase (glutaredoxin)"
/protein_id="WP_006115730.1"
/translation="MTIMIYHNPACGTSRNVLALIRNAGIEPTTIEYLKTPPGRAELV
DLIARMGVPVRSVLREKGTPFHELGLDNPALSDDALIDAMMAHPILINRPIVVTPLGA
ALCRPSETVLDILPNPQRGAFVKEDGEKIVDESGKRII"
gene complement(57832..58185)
/locus_tag="APA07_RS14820"
CDS complement(57832..58185)
/locus_tag="APA07_RS14820"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007397884.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="metalloregulator ArsR/SmtB family transcription
factor"
/protein_id="WP_006115729.1"
/translation="MDTESALAALSALSQSTRLEIFRLLVRHEPDGLPAGDVARHLDV
PQNTISAHLATLTRAGLLTSQRHSRLIVYRACLPRLRDLMLFLVTDCCAGSPELCAPL
VASLSSCCPSPESCS"
gene complement(58322..59059)
/locus_tag="APA07_RS14825"
/old_locus_tag="APA07_42370"
CDS complement(58322..59059)
/locus_tag="APA07_RS14825"
/old_locus_tag="APA07_42370"
/EC_number="3.4.-.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813275.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="SprT family zinc-dependent metalloprotease"
/protein_id="WP_012813275.1"
/translation="MGDKDHRILTYGDEHIRVELLPRARPGTTLRIKVHPDLTVQVVV
PEDTIETDLDRALKQKTRWIWQKLRDFRAVQEHATPRAYVSGESHFYLGRRHLLKVQH
QPDAPETVRMLRGRLEVSVQERNALRIQKLLELWYFARAQDVFRTRLDALLPSALWVT
TPPTLKLQVMQTQWGNCSAGGTITLNPHLVKAPRDCIDYVILHELCHLKEHNHGPAFW
ALLARVMPDWERHKVRLDGMAEMMLQN"
gene complement(59062..62358)
/locus_tag="APA07_RS14830"
/old_locus_tag="APA07_42380"
CDS complement(59062..62358)
/locus_tag="APA07_RS14830"
/old_locus_tag="APA07_42380"
/EC_number="3.1.21.3"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813276.1"
/GO_component="GO:0019812 - type I site-specific
deoxyribonuclease complex [Evidence IEA]"
/GO_function="GO:0009035 - type I site-specific
deoxyribonuclease activity [Evidence IEA]"
/GO_process="GO:0009307 - DNA restriction-modification
system [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="HsdR family type I site-specific
deoxyribonuclease"
/protein_id="WP_012813276.1"
/translation="MVSAPKFQEEYSAKLPALALLSTLGWRFLPPSEALALRGDRQSA
VVLDTLLRAELKKRCFTFEGQEHSLSDQAINTLVSHVTHPDFVSGLRDANDKMTTHLL
FGIAIPEFINGHKANPTIALIDWQNPENNSFTFTEEFSVLRTDLTQTRRPDIVCFVNG
IPLAVIEAKRPDGQPGKGPTVEAGISQSIRNQNKDEIPQLFAYSQLLLSINGHDGRYG
TCGTPKKFWASWKEEDIPESRMEALKNMPLSGTQKDVLFADRKPPARIWFEDWASRPL
HVSDQDRLLIGLLSPQRLLDMTRYFTLVDRKVGKIVARYQQVFGIKRLLERIKSRRSD
GGREGGVVWHTTGSGKSFTMVFLSRALILDDDLKQCRIIVVTDRKDLERQLSITFSTG
GELADKKDKEEALATSGRRLAQQIGHGQERIIFSLINKFHTATGYPECHNDSADIIVL
VDEGHRSQGGENHARMKHALPNAAFIAFTGTPLLKGSETTNRFGKIIHSYTMQQAVAD
GTVTPLLYEERKPDLDVNDRAIDAWFERITQGLTEEQVTDLKKRFARANQVYKADDRI
RLIAMDLATHFDSNIDSGLKGMLACDSKLSAIRYKRYLDEVGLFESAIVMSPPDTREG
HTEVDERKQPEIQTWWKENVGSQSEEDYTRDVIDRFENDPNLKLIIVVDKLLTGFDEP
KNAVLYIDKPLKQHNLLQAIARVNRLHDQKKHGLLIDYRGILAELDTTLAKYDELAAE
NVGGYDPKDIAGLYSQMSTEYRELPALHKALWAIFDGVKNKSDIQQLRAVLMPRMVEE
HGQMVDVNLKRRDDFYEALTKFAACLKVALQSVAFFEDTSFTEKDRATYKETLKQLTS
LRQMVMQDTGEKVDFDQYAEQVKKLLDRHVAGVKVHESEGLYAVGKMGQKPDDNQPET
WSEEKTRNETDLIRTRVTKMIDHEMQDDPYAKEAFSALLRKVIAEAESLFDHPLKQFM
LFQEFEEQVANRKLENIPTVFDGHRHAQAYYGVFLKTLAAIFNHKQTDEENQRWIDLA
FQIDTIVDKAVRENSLSRPDMEKAVRKELLPLLFSTGQKAGFGVDKAQEIIEQVIQIM
RAGPADTLRS"
gene complement(62390..63544)
/locus_tag="APA07_RS14835"
/old_locus_tag="APA07_42390"
CDS complement(62390..63544)
/locus_tag="APA07_RS14835"
/old_locus_tag="APA07_42390"
/EC_number="3.1.21.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813277.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0006304 - DNA modification [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="restriction endonuclease subunit S"
/protein_id="WP_012813277.1"
/translation="MLPEGWKETTLEKYIHVKHGYAFKGEYFSNSGKYIVLTPGNFFE
TGGFKEQKDKIKYYSGEIPKEYILKKGDCILAMTEQGAGLLGSAAFIPNDDKFLHNQR
IGLIEITDPNSVSSDFLYWLYNDPKNRLIISNEAGGTKVKHTSPKKLVDISILLPPLS
EQKKIAAILSTWDRAIEETEKLLANSQQQKKALMQQLLTGKKRLPGFTGEWKTKYLGD
IADIQTGSSNRQDSLTNGEYTFFDRSEDIRTSNRYLFDCEAVIVPGEGQDFVPKYFVG
KFDLHQRTYAISCFQACDGKFIFYTVGYHRSHFLSQAVGSTVKSLRLPMFQKMPLKLP
PLSEQRAIAAVLTTADEKLAALESDLSRLRQEKKALMQQLLTGKRRVTVD"
gene complement(63534..65060)
/locus_tag="APA07_RS14840"
/old_locus_tag="APA07_42400"
CDS complement(63534..65060)
/locus_tag="APA07_RS14840"
/old_locus_tag="APA07_42400"
/EC_number="2.1.1.72"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019088982.1"
/GO_function="GO:0009007 - site-specific
DNA-methyltransferase (adenine-specific) activity
[Evidence IEA]"
/GO_function="GO:0015666 - restriction
endodeoxyribonuclease activity [Evidence IEA]"
/GO_process="GO:0006306 - DNA methylation [Evidence IEA]"
/GO_process="GO:0009307 - DNA restriction-modification
system [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type I restriction-modification system subunit
M"
/protein_id="WP_012813278.1"
/translation="MTEQISQDTINKALWNACDTFRGTVSPDTYRDYVLTMLFLKYIS
DVWQDHYDTYKKEYGDNPELIEAMMAQERFVLPKGADFYTLYKERNTPGNGERIDKAL
HAIEEANGTKLKDAGKSVFQDISFNSDRLGDEKQKNTVLRHLLEDFAKPDLNLRPSRV
GNLDVIGNGYEFLIKNFAASGGQKAGEFYTPPEVSELLARILSPQPGESICDPACGSA
SLLMKCGKQVTQNHNGSKDYALYGQEAIGSTWSFAKMNMFLHGEDNHRIEWGDTIRSP
KLLDDKNHLMRFDVVTANPPFSLDKWGHEDAAEDVHHRFARGVPPKTKGDYAFILHMI
STLKDRTGRMGVVVPHGVLFRGSSEGRIRQKLIEENLLDAVIGLPEKLFFGTGIPAAI
LIFRKDRKTKDVLFIDASREFKAGKNQNVLTEENITKIVNTYRTRKDVDKYAHLATPD
EIRENDYNLNIPRYVDTFEEEEEIDLNAVRKERAEIKAELAKLEAQMDAYLKELGYAS
"
gene complement(65096..65692)
/locus_tag="APA07_RS14845"
/old_locus_tag="APA07_42410"
CDS complement(65096..65692)
/locus_tag="APA07_RS14845"
/old_locus_tag="APA07_42410"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813279.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012813279.1"
/translation="MKPNGAQKMDLVAVASISAGHPFRGRIDPVAGVETAVVQMRDTS
SSGVDWTSCVRTEVAGRREPDWLRPGDILFPARGNVSLAVLVNESIGSLQAVAAPHFF
LLRVMHPNVLPAYLAWWLNQEPAQRHLEQNAQSSTLVRNIARPVLEATPVILPPLPRQ
EQIVGLANAMQREEDLLHRLRQTNQQIMTGLARDLLAG"
gene complement(65928..67015)
/locus_tag="APA07_RS14850"
/old_locus_tag="APA07_42420"
CDS complement(join(65928..66754,66754..67015))
/locus_tag="APA07_RS14850"
/old_locus_tag="APA07_42420"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012476889.1"
/ribosomal_slippage
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="programmed frameshift; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/codon_start=1
/transl_table=11
/product="IS3 family transposase"
/protein_id="WP_148194249.1"
/translation="MKSDRFSDAQIMGVIRQAEGGVPVPDLCREHGISNATFYRWRAK
YGGMDASMISQMKALEEENRRLKRMYADLSMQTDILKEALGKKLKRPAQRRELAAQAV
AHHGVSIALACRIFGISETCFRYRPRLAAENDRIADLLVGLTQAHRRWGFGLCFLYLR
NVQGQLWNHKRVYRIYREQELNLRIKPRRRLVREKPEKLSVPALPNRVWSMDFMADRL
MDGRAFRLLNILDDFNREGLAIEGDFSLPACRVVRCLEQVMEWRGRPEAIRMDNGPEY
VSHTLVPWAEKQGITLIYTQPGNSQQNASIERYNRTVRQEWLEQYLFESIQDVQEVAT
QWLWTYNHDRPNMGNSGLTPAQKLKTAA"
gene <67086..67442
/locus_tag="APA07_RS14860"
/old_locus_tag="APA07_42440"
/pseudo
CDS <67086..67442
/locus_tag="APA07_RS14860"
/old_locus_tag="APA07_42440"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010668756.1"
/GO_function="GO:0005384 - manganese ion transmembrane
transporter activity [Evidence IEA]"
/GO_process="GO:0030026 - cellular manganese ion
homeostasis [Evidence IEA]"
/note="incomplete; partial in the middle of a contig;
missing N-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="VIT1/CCC1 transporter family protein"
gene 67520..67873
/locus_tag="APA07_RS16285"
CDS 67520..67873
/locus_tag="APA07_RS16285"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007397884.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="metalloregulator ArsR/SmtB family transcription
factor"
/protein_id="WP_006115729.1"
/translation="MDTESALAALSALSQSTRLEIFRLLVRHEPDGLPAGDVARHLDV
PQNTISAHLATLTRAGLLTSQRHSRLIVYRACLPRLRDLMLFLVTDCCAGSPELCAPL
VASLSSCCPSPESCS"
gene 67870..68292
/gene="arsC"
/locus_tag="APA07_RS14865"
/old_locus_tag="APA07_42450"
CDS 67870..68292
/gene="arsC"
/locus_tag="APA07_RS14865"
/old_locus_tag="APA07_42450"
/EC_number="1.20.4.1"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_006115730.1"
/GO_function="GO:0008794 - arsenate reductase
(glutaredoxin) activity [Evidence IEA]"
/note="This arsenate reductase requires both glutathione
and glutaredoxin to convert arsenate to arsenite, after
which the efflux transporter formed by ArsA and ArsB can
extrude the arsenite from the cell, providing resistance;
Derived by automated computational analysis using gene
prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="arsenate reductase (glutaredoxin)"
/protein_id="WP_006115730.1"
/translation="MTIMIYHNPACGTSRNVLALIRNAGIEPTTIEYLKTPPGRAELV
DLIARMGVPVRSVLREKGTPFHELGLDNPALSDDALIDAMMAHPILINRPIVVTPLGA
ALCRPSETVLDILPNPQRGAFVKEDGEKIVDESGKRII"
gene 68292..>68756
/locus_tag="APA07_RS14870"
/old_locus_tag="APA07_42460"
/pseudo
CDS 68292..>68756
/locus_tag="APA07_RS14870"
/old_locus_tag="APA07_42460"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_006115732.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/note="incomplete; partial in the middle of a contig;
missing C-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="ArsB/NhaD family transporter"
gene 68812..70022
/locus_tag="APA07_RS14880"
/old_locus_tag="APA07_42480"
CDS join(68812..69097,69097..70022)
/locus_tag="APA07_RS14880"
/old_locus_tag="APA07_42480"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_076612078.1"
/ribosomal_slippage
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="programmed frameshift; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/codon_start=1
/transl_table=11
/product="IS3 family transposase"
/protein_id="WP_148194250.1"
/translation="MSNKSKRFPPEFRDRAARMVLEEEKNHPSRWSAVMMIAPKLDIH
PDTLSKWTRLHERANAPAVSELPDREKIRQLERENRELRQANDILRKASAYFCPGGAR
PHLQAMTRFIEEHRQTYGVGSICRVLSIAPSAYYATVARQKNPCVRSQKDKELCDDIR
RVWNNNFCVYGARKVWHQLRREGLDVARCTVERLMRRMGLKGVIRGKGVRTTRPDPQR
PCPQDLVQRQFHAPAPNRLWVSDFTYVSTWQGFVYVAFIIDVFARVIVGWRVSSTAHT
DFVLDALEQALCQRRPEGKVTHHSDRGCQYVSIRYTQRLAEAGLVASVGSVGDSYDNA
LAETINGLYKTELIYRQGPWKNREAVELATLKWVDWFNNRRLLSSIGNIPPAEAEARF
YAQQKSHALAA"
misc_feature 69090..69206
/locus_tag="APA07_RS14880"
/old_locus_tag="APA07_42480"
/inference="COORDINATES: nucleotide
motif:Rfam:14.4:RF01497"
/inference="COORDINATES: profile:INFERNAL:1.1.4"
/note="AL1L pseudoknot; Derived by automated computational
analysis using gene prediction method: cmsearch."
/db_xref="RFAM:RF01497"
gene 70023..70883
/locus_tag="APA07_RS14885"
/old_locus_tag="APA07_42490"
/pseudo
CDS 70023..70883
/locus_tag="APA07_RS14885"
/old_locus_tag="APA07_42490"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012333165.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="internal stop; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS481 family transposase"
gene complement(71062..71973)
/locus_tag="APA07_RS14890"
/old_locus_tag="APA07_42500"
CDS complement(71062..71973)
/locus_tag="APA07_RS14890"
/old_locus_tag="APA07_42500"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813285.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="LysR family transcriptional regulator"
/protein_id="WP_012813285.1"
/translation="MRGYDLDLLRFLQVLIEEQSVSNAARRMNVSEPAMSRHLSKLRT
VFGDPILVPSGRRLIASTFALNIRDRLQAVLRAADGLIETQALANLRNMAPKFTVRAN
DVIIAAIALPLLQALRQDCPNCELVFAPEFDEAANLALRDDSIDLYIGATDVLKPEIR
RQTIFHHVMKALVRADHPILSEGVTVESLTRFEHISVSRRGRAHGPIDTILRDQFGLT
RRVVLVVPNYKAMIDSIRGTDFIVTLPDMALNNVLLTETGLAAIDYPFPLPRVEAFQA
WHPRRDNDPVHRWLRETLFRVAQKFQN"
gene 72092..73789
/locus_tag="APA07_RS14895"
/old_locus_tag="APA07_42510"
CDS 72092..73789
/locus_tag="APA07_RS14895"
/old_locus_tag="APA07_42510"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813286.1"
/GO_function="GO:0022857 - transmembrane transporter
activity [Evidence IEA]"
/GO_process="GO:0055085 - transmembrane transport
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="MFS transporter"
/protein_id="WP_012813286.1"
/translation="MNSSHDGTPDDIRGLGERTHQLSPARSFSPAAPIIHPSPPLPSY
IPPFGRRTIIGCLGVLLAVHMASFNEHVTEIGLSDIRGAMHIGHDEGTWFTTIYEAFN
IASMAFTPWFYATFSIYRFSIFMTAMIALLAIPAPFMPDVTSLCILRGFQGLTAGCLP
PVLMTVMLKYLPAEIRVFGIGAYAMSATFGPNLGVPLEAFWFEYVGWHWLYWEIIPLA
VLSIFMIAYGLPRDPLQLERFGKFNWLGLLTGLPAICSLVIVLYQGDRLDWFRSPVIT
DLAFWGCAAFIVFLVNESFHPSPFFKIHYWGSRSIAASLLSLIGILAICGLLSALPMS
YLEEIRGYRPQQISPVSLVVALPQLIMLPLIAAICNSRKVDCRYVLAAGMLCLAVASW
LGTWLTPDWVRDNFYVMQALQAFGQPMTVIPTLMLSALALGPADGPFISGMVNMLKGL
ANAVAFALFAALTRRREHYHSVMLLDHYGNHGLALQGMGDPIGHQLANTSPDAQHVVH
NALEVFHTFVHEQALVLGFADIYFILIWVCIFFAILNIILPRRVYPPRAPSILNSAK"
gene 73978..75170
/locus_tag="APA07_RS14905"
/old_locus_tag="APA07_42530"
CDS join(73978..74236,74236..75170)
/locus_tag="APA07_RS14905"
/old_locus_tag="APA07_42530"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_076611353.1"
/ribosomal_slippage
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="programmed frameshift; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/codon_start=1
/transl_table=11
/product="IS3 family transposase"
/protein_id="WP_124307069.1"
/translation="MGKVTRKRYAAEFKSRVALEAIRGELTLAELASKHGVHQTMIAQ
WKRQAIEGMASLFSGKSVTEPSVSPADVEKLHAKIGQLLVERGFFTRCLCSVGRDQRR
QMIDPKRACLPIIRQCTLLQLNRSGVYYRPVPQSEANLELMRLIDAQFLETPYYGSRQ
MTWHLRRLGHEVGRKRVRRLMVIMGLRAIYQKPRTTVPHPEHRKYPYLLRDLVINRPD
QVWCSDITYIPMKRGFLYLVAIMDWFTRKVLSWRLSNTMDVEFCIEALQDALMRYGAP
DIFNTDQGSQFTTPRFTGILEERQIRISMDGRGRWRWLDNVFIERLWRSLKYECVYLH
AFETGSELRAGLGIWIAHYNERRPHTALAGRTPDEAYHDVPTPSGPGLTPDQMANSNA
VRRAA"
gene 75415..76020
/locus_tag="APA07_RS14910"
/old_locus_tag="APA07_42540"
CDS 75415..76020
/locus_tag="APA07_RS14910"
/old_locus_tag="APA07_42540"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_006117298.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_250698443.1"
/translation="MPVDLIYRLVRPNPKRYIPAFNLFVGMVFPTGDYTKLGDKQDGV
GSGAYVFRTALTEQSTYTLPGNHELRLRVWNWFRRAVTSAKLVDTTSYGTAYGFRGRG
QPGMSGQTGFSLEYGLSQKWVLAMDIAHDWSNGSTLRGHDKNGTYIHKTGAAGTDWQI
APAFEYNWNANWGVIVGSAFYFAGHNKSIQVSPQFAVNAMF"
gene complement(76062..76451)
/locus_tag="APA07_RS14915"
/old_locus_tag="APA07_42550"
CDS complement(76062..76451)
/locus_tag="APA07_RS14915"
/old_locus_tag="APA07_42550"
/inference="COORDINATES: protein motif:HMM:NF013970.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type II toxin-antitoxin system VapC family
toxin"
/protein_id="WP_012813288.1"
/translation="MFDTNTISDIIRADERVLLHVEALDPDQCCVSAVTAGEVAYGLA
KRPSATRLQRLTRTVMDRLTILPWNNDVAEHYGKLRAEQERRGQILGSLDLMIAAHAL
TEHLMLVTSDHAFSQVRGLTVRNFRNS"
gene complement(76460..76714)
/locus_tag="APA07_RS17055"
CDS complement(76460..76714)
/locus_tag="APA07_RS17055"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_006560334.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DNA-binding protein"
/protein_id="WP_041633335.1"
/translation="MSDTAKIFMTGRSQAVRLPAAYRFDTSEVTIRRDPRTGDVILSP
RPEGWSETLSAIRKAKGADLFPEGRSQDQQDRDPFSECLP"
gene 77189..>77815
/locus_tag="APA07_RS14925"
/pseudo
CDS 77189..>77815
/locus_tag="APA07_RS14925"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003626656.1"
/note="incomplete; partial in the middle of a contig;
missing C-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="recombinase family protein"
gene complement(77817..78776)
/locus_tag="APA07_RS14930"
/pseudo
CDS complement(77817..78776)
/locus_tag="APA07_RS14930"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007635327.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="internal stop; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS481 family transposase"
gene <78834..>78923
/locus_tag="APA07_RS17060"
/pseudo
CDS <78834..>78923
/locus_tag="APA07_RS17060"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011548634.1"
/note="Hsp31 stabilizes early unfolding protein
intermediates under severe heat stress; incomplete;
partial in the middle of a contig; missing N-terminus and
C-terminus; Derived by automated computational analysis
using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="protein deglycase HchA"
gene 78990..80077
/locus_tag="APA07_RS14940"
/old_locus_tag="APA07_42590"
CDS join(78990..79251,79251..80077)
/locus_tag="APA07_RS14940"
/old_locus_tag="APA07_42590"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012476889.1"
/ribosomal_slippage
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="programmed frameshift; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/codon_start=1
/transl_table=11
/product="IS3 family transposase"
/protein_id="WP_148194253.1"
/translation="MKSDRFTDAQIMGVIRQAEGGVPVPDLCREHGISNATFYRWRAK
YGGMDASMISQMKALEEENRRLKRMYADLSMQTDILKEALGKKLKRPAQRRELAAQAV
AHHGVSIALACRIFGISETCFRYRPRLAAENDRIAALLVGLTQAHRRWGFGLCFLYLR
NVQGQLWNHKRVYRIYREQELNLRIKPRRRLVREKPEKLSVPALPNTVWSMDFMADRL
LDGRAFRLLNILDEFNREGLAIEVDFSLPACRVVRCLEQVMEWRGRPEAIRMDNGPEY
VSHTLVSWAEKQGITLIYTQPGNPQQNAYIERYNRTVRQEWLEQYLFESIQDVQEVAT
QWLWTYNHDRPNMGNSGLTPAQKLKTAA"
gene 80271..81869
/locus_tag="APA07_RS14945"
/old_locus_tag="APA07_42600"
CDS 80271..81869
/locus_tag="APA07_RS14945"
/old_locus_tag="APA07_42600"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813291.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="KUP/HAK/KT family potassium transporter"
/protein_id="WP_012813291.1"
/translation="MSLTAPASVQVGKGAAGHDARPAGFAAILGALGVVFGDIGTSPI
YALRTTAQVVSDHGTIAASEVLGVESLLFWTLMLIVTVKYVILVMRADYNGEGGIIAL
MSLAQQTAKRRSVKLLLGMTGVIGACLFFGDGIITPAVSVISAIEGIEVSFPAASHLV
VPLSIVVLIGLFSIQFHGTGRIGIIFGPVMVVWFLMIGILGVLAIIHHPGILLALSPI
YAIMFIAQHGYLSFLALGSVVLAVTGAEALYADMSHFGRRPIREAWLFFVLPCLALNY
FGQGALLISDPATISNPFFLLGPQWLQVPMIIISTIATVIASQACISGGFSLCRQLIQ
LGYVPRMRIMHTNPTEESQIYLPGLNHSLMVGALLLVIAFRSSEALASAYGIAVTGTF
LCTCILAAVVYRDRYKWSPWATIAVFGGFFIIDGIFFASNTLKIIEGGWVPVLLAAVL
ILMMFTWKKGRSLVLARQQHDAMSVAAFMARLPHSRSIIRVPGTGVFMTANPEFIPTS
LLHNLKHNKVLHEHVVIPPFLVGH"
gene complement(81878..82965)
/locus_tag="APA07_RS14950"
/old_locus_tag="APA07_42610"
CDS complement(join(81878..82704,82704..82965))
/locus_tag="APA07_RS14950"
/old_locus_tag="APA07_42610"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012476889.1"
/ribosomal_slippage
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="programmed frameshift; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/codon_start=1
/transl_table=11
/product="IS3 family transposase"
/protein_id="WP_148194248.1"
/translation="MKSDRFSDAQIMGVIRQAEGGVPVPDLCREHGISNATFYRWRAK
YGGMDASMISQMKALEEENRRLKRMYADLSMQTDILKEALGKKLKRPAQRRELAAQAV
AHHGVSIALACRIFGISETCFRYRPRLAAENDRIADLLVGLTQAHRRWGFGLCFLYLR
NVQGHVWNHKRVYRIYRELELNLRIKPRRRLVREKPEKLSVPALPNTVWSMDFMADRL
LDGRAFRLLNILDEFNREGLAIEVDFSLPACRVVRCLEQVMEWRGRPEAIRMDNGPEY
VSHTLVSWAEKQGITLIYTQPGNPQQNAYIERYNRTVRQEWLEQYLFESIQDVQEVAT
QWLWTYNHDRPNMGNSGLTPAQKLKTAA"
gene 83080..83394
/locus_tag="APA07_RS14960"
/old_locus_tag="APA07_42630"
CDS 83080..83394
/locus_tag="APA07_RS14960"
/old_locus_tag="APA07_42630"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="potassium transporter Kup"
/protein_id="WP_012813292.1"
/translation="MTDQRAEVAEVAPNIYRVTLRYGFMEMPNLPPALAQLQFESTGF
DVSQASYFVSRELLVRSRPSHISRWRMALFLLMTKNATPITDFLRIPLDRVVELGVRI
GI"
gene complement(83677..84457)
/gene="istB"
/locus_tag="APA07_RS14965"
/old_locus_tag="APA07_42640"
/pseudo
CDS complement(83677..84457)
/gene="istB"
/locus_tag="APA07_RS14965"
/old_locus_tag="APA07_42640"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012553061.1"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/note="frameshifted; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS21-like element helper ATPase IstB"
gene complement(84447..>85910)
/gene="istA"
/locus_tag="APA07_RS14970"
/old_locus_tag="APA07_42650"
/pseudo
CDS complement(84447..>85910)
/gene="istA"
/locus_tag="APA07_RS14970"
/old_locus_tag="APA07_42650"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012226833.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="incomplete; partial in the middle of a contig;
missing N-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS21 family transposase"
gene 86004..87389
/locus_tag="APA07_RS14975"
/old_locus_tag="APA07_42670"
CDS 86004..87389
/locus_tag="APA07_RS14975"
/old_locus_tag="APA07_42670"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012812390.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS1380-like element IS1380A family transposase"
/protein_id="WP_012813230.1"
/translation="MQTECSAGAYEFPASCGRRVVARFDGGRMSSDGGVIVVKQADDI
LGLSRRFAACFRDKRHPGFVEYRVEDLVRQRIMGLALGYEDLNDHDALRHDLIFGLAS
GRLSGGRANCAALAGKSTLNRLERSGHKADRYCRIIADHEALATLFVTLFLDQHEHAP
ARIVLDVDATDDRIHGHQEGRAFHGYYGHNCYLPLYVFCGDHLLSATLRTADRDPGKE
ALADIRRIVEQIRSRWPRVRILVRGDSGFARDSLMTWCEDNHVDFLFGLAGNTRLYDR
IASLSAEVRDEAATTGRAARGFASFDWITKDSWTRRRRVVAKAEWRHGNRYHRFIVTT
LPQGMSDPRHLYEQIYCARGDMENRIKECQMDLFSDRTSSHTIRANQLRLWFSAAAYV
LLTALQRLALGQTSLETATCGTIRARLLKIATRVTLSVRRIVLSMPDMFPCQHEFALA
HARLRRLRQAI"
gene 87619..88104
/locus_tag="APA07_RS14980"
/old_locus_tag="APA07_42680"
CDS 87619..88104
/locus_tag="APA07_RS14980"
/old_locus_tag="APA07_42680"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813296.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="relaxase domain-containing protein"
/protein_id="WP_012813296.1"
/translation="MPTGGDPHAHFHNTMFNMVVTDDGHVGSLDTKQLRSRVHEFGAY
FQAILAQELRKIGIAQTYDANEQATVVSAVPQEISDFFSKGRRNVLKAAQSYASEQGL
EWDKLSIERKQKMLSMAGLAARLGKDLDADDHDIWKRQAKELGWVEQSLMGPEIDPGL
D"
gene complement(88142..>88783)
/locus_tag="APA07_RS14985"
/old_locus_tag="APA07_42690"
/pseudo
CDS complement(88142..>88783)
/locus_tag="APA07_RS14985"
/old_locus_tag="APA07_42690"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_086558243.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="incomplete; partial in the middle of a contig;
missing N-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS3 family transposase"
gene complement(88968..90353)
/locus_tag="APA07_RS14990"
/old_locus_tag="APA07_42700"
CDS complement(88968..90353)
/locus_tag="APA07_RS14990"
/old_locus_tag="APA07_42700"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012812390.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS1380-like element IS1380A family transposase"
/protein_id="WP_012813298.1"
/translation="MQTECSAGAYEFPASCGRRVVARFDGGRMSSDGGVIVVKQADDI
LGLSRRFAACFRDKRHPGFVEYRVEDLVRQRIMGLALGYEDLNDHDALRHDLIFGLAS
GRLSGGRANCAALAGKSTLNRLERSGHKADRYCRIIADHEALATLFVTLFMDQHERAP
ARIVLDVDATDDRIHGHQEGRAFHGYYGHNCYLPLYVFCGDHLLSATLRTADRDPGKE
ALADIRRIVEQIRSRWPRVRILVRGDSGFARDSLMTWCEDNHVDFLFGLAGNTRLYDR
IASLSAEVRDEAATTGRAARGFASFDWITKDSWTRRRRVVAKAEWRHGNRYHRFIVTT
LPQGMSDPRHLYEQIYCARGDMENRIKECQMDLFSDRTSSHTIRANQLRLWFSAAAYV
LLTALQRLALGQTSLETATCGTIRARLLKIATRVTLSVRRIVLSMPDMFPCQHEFALA
HARLRRLRQAI"
gene complement(90411..92441)
/locus_tag="APA07_RS14995"
/old_locus_tag="APA07_42710"
CDS complement(90411..92441)
/locus_tag="APA07_RS14995"
/old_locus_tag="APA07_42710"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813299.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="TraM recognition domain-containing protein"
/protein_id="WP_012813299.1"
/translation="MVKRQIGGPLGHQQIKRGATYRDTRPLFERFTAEMRTSSSGFVL
LIVAGLSWFIPALVGLTLPLALLLTCWVVTRKPLLPFHLPRYSELPDAHDLDPSTRKP
KKAGGIIYLGTDAHTGQQLWFSSDAGRQHAAMPGTTGAGKTTSALSLMANPLSHGSGF
LLIDGKGDNTVYGDVAALLRRFGLDDQLLTLNLLTASSIRESNTFNPFATGNADAIRE
MLVSQLGEPVSNDANGVFRDRAVNLIGTLTPALVWMRDRHGISINIETIRFATELRWL
ATLARHKIFLVRSPGQPQPIKIPVPDIPDDVLYPFQAYLGELPGYDIGLEWNQQKESR
PSEQHGFATMYFSKIFTQFAVSLGHIFKCENGDIDMRDVVLNRRVLVVILPSLENSSD
TLAGLGKIIVASVRAVMAQLLGARLNGPASEIFKLKAGSGDAPYQFFFDELSAYATDG
MDRMLAMGRGLNCMFWLGFQDLPGLTSRIGDKAFTLLGNANLTHAMRLQDAMRTREWI
EKQADRVEVTQATHYEGNSAGSYREGRGAEIREVARIPWADLQSLIEGEAITMFGGKV
VHSKTFFAAVNGRTGVIRTAQPVMLSAPLVLDGSAPDDETRAVLETIENGSYRSELHA
PVTEPAFERLVAEVKSAGNTPAAIGRRFPIIAQATVGLSVDAEISQKGCTSG"
gene 92492..92662
/locus_tag="APA07_RS16645"
CDS 92492..92662
/locus_tag="APA07_RS16645"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_158301033.1"
/translation="MSRVGADPRLARLLWSVQRQLLGHPLDSARLQLGLFHQVFVGEA
LYGLMLLPVAYL"
gene complement(93090..94238)
/locus_tag="APA07_RS15000"
/old_locus_tag="APA07_42730"
CDS complement(93090..94238)
/locus_tag="APA07_RS15000"
/old_locus_tag="APA07_42730"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813301.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012813301.1"
/translation="MSSSSTPWSSSDDYALFSIIAIIVGGAGLSYMVWSNWHAEISLL
YIRALVWQIDFLHLHSQPLVQLRQQLVTASWSPEHVRAIQLWYGLMILGSALRWPVAI
IIAALGITCIFRATPGRFAKALDLEGLIEVQARMFPTLRGFAERRLTKLVAPAQGMPR
PADPALHAHEWRARFATDRNGHFSEAGAISAFTAQLGRHWTGLDAATPVERVLFAAFI
AHHSQERAEAMDLLGRLSESLRKAGLDGPEGPKSALSVPSEIISIADEKLSVPGVSAK
IDTICARNGWTTTALMTLLTEARRKAGVLAPPAFAIVKLIDRSLWYALHSLDFPHERP
EEDVHPNPRVEAAGARAHWEAERKARRPIYTPTVSVAVATLQKNSDQS"
gene complement(94235..94750)
/locus_tag="APA07_RS15005"
/old_locus_tag="APA07_42740"
CDS complement(94235..94750)
/locus_tag="APA07_RS15005"
/old_locus_tag="APA07_42740"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813302.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="lytic transglycosylase domain-containing
protein"
/protein_id="WP_012813302.1"
/translation="MKSLSLLTATFLALGLTRISHAQTAQDDAFVQGQRVQACLTAAA
SNARVPAGVLLVLLYVENGRPGMVSTNSNGTVDLGPMQVNSTWVRKVAAHWHSTPLRT
YTALRDNVCANIEAGSWILGQALSETHGDLWQAVAYYHSHTPRYGEAYLRRFYHIATD
MMVRARKGRAS"
gene complement(94750..95184)
/locus_tag="APA07_RS15805"
CDS complement(94750..95184)
/locus_tag="APA07_RS15805"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_064776532.1"
/translation="MNISASIVRVDDVAHGVLTLLSEIERPAIVVDRATGQEASVSHE
EIARADGYLPVIVVAAEALWFDLTGTGFALDVRENAEATLGYSLHGIRAGSWSVLMLC
IIDLFETLALNEETLRLNDLVELWGNARSRLQTVPVPLQEAS"
gene complement(95181..95429)
/gene="icmT"
/locus_tag="APA07_RS16865"
CDS complement(95181..95429)
/gene="icmT"
/locus_tag="APA07_RS16865"
/inference="COORDINATES: protein motif:HMM:NF038220.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IcmT/TraK family protein"
/protein_id="WP_081273971.1"
/translation="MWRGTGLPVKFLILDARSCLPILLAVVHWSWTTLIIGVLGTAFF
GTISFFGLTLPAALRTARRWLIGRRRTAVPTWKRRRYS"
gene complement(95429..96595)
/locus_tag="APA07_RS15015"
/old_locus_tag="APA07_42760"
CDS complement(95429..96595)
/locus_tag="APA07_RS15015"
/old_locus_tag="APA07_42760"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813304.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ATPase, T2SS/T4P/T4SS family"
/protein_id="WP_012813304.1"
/translation="MNVIITPPEERETWENEGRSGYTWVVERRKYAPGLDDLLKWAYR
LGASRIDFKTGHPVTILVHGKVRCATRGATDDFAIADVVSHMYAQDGMSMLAIYHDLD
SAYSVSLNRRETLRFRVNFTPCEVMRGQGVNIVMRPIPSRPPSLASQNVEPEVLASND
IPSGMKLIGGATGQGKSSLTFALAEEKVMRPDANCNIATGESPVEFLMDYIRSPTGSK
ITQTEIRPPHMTFAKFVRGTTRREMTELIVGECRDHETMDAAINCAITGSILGTTIHA
DNVGLMMQRAVSLCAREERDNLVSALAQSMRFCLNQRLLPRKGGGRVAIREFLTFDRD
LRFRLMRTDPQCWPEFINDVLKTDGQSYARAIDARLEQGLITEETALMAKRRDD"
gene complement(96592..97626)
/locus_tag="APA07_RS15020"
/old_locus_tag="APA07_42770"
CDS complement(96592..97626)
/locus_tag="APA07_RS15020"
/old_locus_tag="APA07_42770"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813305.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type IV secretory system conjugative DNA
transfer family protein"
/protein_id="WP_012813305.1"
/translation="MRKTIHYTLMACTMLATFVRPGLAEEAPHIDGRLIPFKTSAPPT
APNGTLVPMPQPPEPAADDIEQAEPALANPTNKPITGAQELDKIVGGDRPLSLEALQN
TRPNDEGSDGLKPGRKEALQEAAHIYGAQGGLAARSFAINEMLRRYEDTLDATFDFRS
LVLPIGSGQTLMQPPIVTEAQMAFALNGTGQVAHETQCVFEITREAQLTSAPPNWRTY
LVRSWRKPQHPAAAALPMNRKEVGYWNDWVAEGWAAGEKQATEIFLSDLSRLQRDIVG
MARYRVLLANGRVEEPHVVFEQKASVGGGDTLHVGDRVVRITSQPGLRGLRRDRGYGF
SAPLYPERCR"
gene complement(97619..98077)
/locus_tag="APA07_RS15025"
/old_locus_tag="APA07_42780"
CDS complement(97619..98077)
/locus_tag="APA07_RS15025"
/old_locus_tag="APA07_42780"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813306.1"
/note="Members of this family include DotD of type IVB
secretion systems and TraH of plasmid conjugative plasmid
systems, both lipoproteins.; Members of this family
include DotD of type IVB secretion systems and TraH of
plasmid conjugative plasmid systems, both lipoproteins;
Derived by automated computational analysis using gene
prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DotD/TraH family lipoprotein"
/protein_id="WP_012813306.1"
/translation="MKKTSFLFATLTIGLTACSGHIKPGPIETTGMPNPELALQRSIS
STTADLRELGTIHAAPSVPVADQSSTPDDINRRIWFVWKGPLNAGVRKLGKEIGYTVT
VFGKSHDIPVQTNSVAAVLDILRSFGDQAGDAATVQVDPFHHQIAVVYHA"
gene 98216..>98440
/locus_tag="APA07_RS16310"
/pseudo
CDS 98216..>98440
/locus_tag="APA07_RS16310"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_014849395.1"
/note="internal stop; incomplete; partial in the middle of
a contig; missing C-terminus; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="transposase"
gene 98773..99042
/locus_tag="APA07_RS15030"
/old_locus_tag="APA07_42790"
CDS 98773..99042
/locus_tag="APA07_RS15030"
/old_locus_tag="APA07_42790"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813307.1"
/GO_process="GO:0006355 - regulation of DNA-templated
transcription [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type II toxin-antitoxin system RelB/DinJ family
antitoxin"
/protein_id="WP_012813307.1"
/translation="MTSSNAISQVNLKVNTQLKENAYATLKELGTTPSDFFRDILEYV
VREKKLPIKRLTVSDEDAEFYALVRERLKNPGKIHRNVDLESLLR"
gene 99023..99319
/locus_tag="APA07_RS15035"
/old_locus_tag="APA07_42800"
CDS 99023..99319
/locus_tag="APA07_RS15035"
/old_locus_tag="APA07_42800"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019089371.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type II toxin-antitoxin system RelE/ParE family
toxin"
/protein_id="WP_231111232.1"
/translation="MSPYSVDMLDAAKKELAALPKTENNQIIKRLIKLQDNPHIPALA
LSGNLAGCYEIKLRTAGIRAVYSVDDGKMTLLVIAIGKRERKQVYKTASDRFNE"
gene complement(99542..102190)
/locus_tag="APA07_RS15040"
/old_locus_tag="APA07_42810"
CDS complement(99542..102190)
/locus_tag="APA07_RS15040"
/old_locus_tag="APA07_42810"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="ATP-binding protein"
/protein_id="WP_148194251.1"
/translation="MSREERKQVSEEQAATAKAFPNIGDTQRFALRSEIMLARHTAAV
HRIEGALNGLDISCTLINPHEALRITREIVYRETAASKWNPCLIGDRVMPRLPDAPDA
EGPLLEGELWPAIRDQIFNADADTIGGQLVNIGDYCYAPVDMELGPEDPRPFSELSAT
LGRKRIPWRSAMILESGGGAAFALKEVGAGFLAMLPGNEDIRRSFAALRTMREKKNHN
SVRLRMTAATWAPIGEDAKLRRQASALSQAIEGWGNCKTTRVSGDPLEAAMGSVPTLS
LGSTANPSLAPLGEAFTMMPWVRSASPWQRGSILFRRPDGSIWSFDPTGGGLREAIVD
IIVAPPGGGKTVMSNTINLGLVLSSAALSGNGAKLPFIGKVDIGPGGQGFVSLLQAAL
GQERAHEVAYLKMQKTQGYEVNVFDLQLGLEYPLPLERVFLENFISLLATPLGKPPFE
GMDHLVQDVIDEAYRLCTDVSGGEPKLYRPGTEPMVDAAIQHHNLTLPHHGGEEDPTW
WRDVVDALIDVGDYRMAGIAQRHAVPVLQDLLRAARTPEISKRYEKIRIETGESLIDV
FDRYIMNVIKNFPTLAAPTQLDLGDARVIMIDLAEVAPKGSAAADRQTALMYMLARHL
IARNFFLHPEYADEPVMPSKMRDYHLARFTEMKEAVKRLDYDEWHRAESAPQVNAQAV
RDAREGRKHGVQLGFISQRPRDFSDDLMGQSTGRWVLKKGDGKDAEQLISRWELTTAS
AWIVRNALPGPGRNGAPFFLQLNAAEGMYEVQLINVLGPIELWSFSSTPGDTALRSRL
FNAIGSQMALRYLAVVFPDGSAIGEITRRRHARINETGLSAEEAELGVIDDLAKEILE
GRGIAVGVHDRVRSMDHDNDIPIAAE"
gene 102289..103376
/locus_tag="APA07_RS15050"
/old_locus_tag="APA07_42830"
CDS join(102289..102550,102550..103376)
/locus_tag="APA07_RS15050"
/old_locus_tag="APA07_42830"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012476889.1"
/ribosomal_slippage
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="programmed frameshift; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/codon_start=1
/transl_table=11
/product="IS3 family transposase"
/protein_id="WP_148194247.1"
/translation="MKSDRFTDAQIMGVIRQAEGGVPVPDLCREHGISNATFYRWRAK
YGGMDASMISQMKALEEENRRLKRMYADLSMQTDILKEALGKKLKRPAQRRELAAQAV
AHHGVSIALACRIFGISETCFRYRPRLAAENDRIAALLVGLTQAHRRWGFGLCFLYLR
NVQGQLWNHKRVYRIYREQELNLRIKPRRRLVREKPEKLSVPALPNRVWSMDFMADRL
MDGRAFRLLNILDDFNREGLAIEVDFSLPACRVVRCLEQVMEWRGRPEAIRMDNGPEY
VSHTLVSWAEKQGITLIYTQPGNPQQNAYIERYNRTVRQEWLEQYLFESIQDVQEVAT
QWLWTYNNDRPNMGNSGLTPAQKLKTAA"
gene 103418..103954
/locus_tag="APA07_RS15055"
/old_locus_tag="APA07_42840"
CDS 103418..103954
/locus_tag="APA07_RS15055"
/old_locus_tag="APA07_42840"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019088698.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012813311.1"
/translation="MALCLGLLATPAFAQQTEQGSVGCAELTQAAANAINQRVQANDA
YEKQPDSIGPLSCLDGFLHGQGLNVITSGLDPMSLIQNLESQLGSQICQAAQSAWGNA
MGGTQCSLSLSGINLGLGFGNVGSGTMCPSLNFGGGGPPLASGGFGTTGGSGGLYVES
NPLLPSGYSADSAMDGVF"
gene 104014..105141
/locus_tag="APA07_RS15060"
/old_locus_tag="APA07_42850"
CDS 104014..105141
/locus_tag="APA07_RS15060"
/old_locus_tag="APA07_42850"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019091437.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_259286391.1"
/translation="MTVSIQPQRAYGFMGEAAVVGAIHALQSFMGKQMDKVGENITNS
LNDMTNPNSVSSMIRDAATQEANYAKGQVAAQSRIADAQNTAMAAFLRRQQETGIRDE
HMMSPEFCGGLDSQQTTMAAARASRSALGAITTIVEPRGEAAKGTPSYYGRAQGVDAN
TNFHLRRYCSQEDVDAGLCSAVSRLPNADQRASTLFIADTLSGDGAVDAANDYSTTLI
QPVAPAAIRGEQASSTMGREQMLQRRAYNARMSLARFVMAFITSLETPSVSLTTEQKR
EMQAEGLQPLDRASWLQAMSLEVNRRVSSVSWNAALQAMPTASILREIATELAQSNYL
AMQNYRLGLYQASIGATGIAQNEEARLQHASNKMPSPTINP"
gene 105156..105308
/locus_tag="APA07_RS16815"
/old_locus_tag="APA07_42860"
CDS 105156..105308
/locus_tag="APA07_RS16815"
/old_locus_tag="APA07_42860"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813313.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012813313.1"
/translation="MSETLTQIADLANVMDYLDRTKDVVREHAPDVVQRFERLKERVS
TRISHT"
gene complement(105474..106859)
/locus_tag="APA07_RS15065"
/old_locus_tag="APA07_42870"
CDS complement(105474..106859)
/locus_tag="APA07_RS15065"
/old_locus_tag="APA07_42870"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012812390.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS1380-like element IS1380A family transposase"
/protein_id="WP_012813229.1"
/translation="MQTECSAGAYEFPASCGRRVVARFDGGRMSSDGGVILVKQADDI
LGLSRRFAACFRDKRHPGFVEYRVEDLVRQRIMGLALGYEDLNDHDALRHDLIFGLAS
GRLSGGRANCAALAGKSTLNRLERSGQQADRYCRIIADHEALATLFVTLFLDQHEHAP
ARIVLDVDATDDRIHGHQEGRAFHGYYGHNCYLPLYVFCGDHLLSATLRTADRDPGKE
ALADIRRIVEQIRSRWPRVRILVRGDSGFARDSLMTWCEDNHVDFLFGLAGNTRLYDR
IASLSAEVRDEAATTGRAARGFASFDWITKDSWTRRRRVVAKAEWRHGNRYHRFIVTT
LPQGMSDPRHLYEQIYCARGDMENRIKECQMDLFSDRTSSHTIRANQLRLWFSAAAYV
LLTALQRLALGQTSLETATCGTIRARLLKIATRVTLSVRRIVLSMPDMFPCQHEFALA
HARLRRLRQAI"
gene complement(<106953..>107225)
/locus_tag="APA07_RS15070"
/old_locus_tag="APA07_42880"
/pseudo
CDS complement(<106953..>107225)
/locus_tag="APA07_RS15070"
/old_locus_tag="APA07_42880"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_017503035.1"
/note="incomplete; partial in the middle of a contig;
missing N-terminus and C-terminus; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="SDR family NAD(P)-dependent oxidoreductase"
gene 107281..108491
/locus_tag="APA07_RS16315"
/pseudo
CDS 107281..108491
/locus_tag="APA07_RS16315"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_076612078.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="programmed frameshift; internal stop; Derived by
automated computational analysis using gene prediction
method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS3 family transposase"
misc_feature 107559..107675
/locus_tag="APA07_RS16315"
/inference="COORDINATES: nucleotide
motif:Rfam:14.4:RF01497"
/inference="COORDINATES: profile:INFERNAL:1.1.4"
/note="AL1L pseudoknot; Derived by automated computational
analysis using gene prediction method: cmsearch."
/pseudo
/db_xref="RFAM:RF01497"
gene 108634..110535
/locus_tag="APA07_RS15090"
/old_locus_tag="APA07_42920"
CDS 108634..110535
/locus_tag="APA07_RS15090"
/old_locus_tag="APA07_42920"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012812475.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="Hint domain-containing protein"
/protein_id="WP_012813318.1"
/translation="MADDVTTISSNTSWLNYNGGGTQDSHTPPDNATSGLGTGPTLNV
TNGALLEISGYLNLNAATLNITDGATVSVVPNGLLGGDLTNAAGGTVNIDGGTLTLSN
EFNGNQSVYNITNGTLSVGNDFNGNQAVYNIYKGGVLDAGTNYSNINAGRYNIEGGTV
IFSGIANIDAGNKIDFHNIPGGQLVIGSTSLSDLSGDSLNVENFVYGDQIKIASSTSY
SDDTLSTAISGDDLLIQSTVDGKTTTVVTIKGYATSSAANVEPAPTVTYSDGYILFGE
QSDTGACFLAGSMVRTPQGSVAVENIQAGTDIFVYDWKSNTETTQQVTWAGQAFTVVN
SSLPDDEAGYPVRILKDALADGTPYKDMLVTAEHCLFFNGRFVPARMLVNGASIFYDK
SITSYPYYHVETAEHAVISVDGVLTESYLDTGNRRSFRQNSKVVQLHSKTRTWEEDAA
APLGVDVDFVKPLFDNFKNRARHVAGSQTPAAPGTLTTDPNLHLVTQTGAVIRPVRCA
NQHYSFMLPSGTRSVQIVSRASRPADVIGPFVDDRRQLGVAVADIQLVTARQHATPIT
AHLQPNKPAGWHNTGWAECAWTNGNATLPLDAQTEHNDIAMLSITLQATGSYPLAAEV
QENVQRHSA"
gene complement(110980..112185)
/locus_tag="APA07_RS15095"
/old_locus_tag="APA07_42930"
CDS complement(110980..112185)
/locus_tag="APA07_RS15095"
/old_locus_tag="APA07_42930"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003630712.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS701 family transposase"
/protein_id="WP_012813319.1"
/translation="MIQDMMSGGASVEETLALWASGLRSAKERMAPLFTQKRVVDSAC
AFLDVLIGNEPRKTGWMRAEAAGDPGPWRQQALLGRGHWDADALRDVVRDYVIEHLGT
EEGVLVIDETGFLKKGQASCGVGRQYTGSAGKITNCQIGVFATYVSTRGHAFVDRALY
LPKDWTSKPERLKQAHVPDDVVFATKPALASMMIERSIEAGVPFRWVAADSVYGVGDV
ERTLRRAGIGYVLGVKGNHWFGSWATNPLIAGEARDIASDLSEQDWRRLSAGHGTKGE
RLYDWAYLPLADLDAEEFDCPIAGPWTRGLLIRRNIADGDLAYFTTWSPKGTTTQELV
NVEGTRWRIEEGFETAKNEFGLDHNETRSWHGWHRHVSLVMLAYAVMASVRYQANSLK
PKKTHRRTR"
gene complement(112634..114019)
/locus_tag="APA07_RS15100"
/old_locus_tag="APA07_42940"
CDS complement(112634..114019)
/locus_tag="APA07_RS15100"
/old_locus_tag="APA07_42940"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012812390.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS1380-like element IS1380A family transposase"
/protein_id="WP_082179761.1"
/translation="MQTECSAGAYEFPASCGRRVVARFDGGRMSSDGGVILVKQADDI
LGLSCRFAACFRDKRHPGFVEYRVEDLVRQRIMGLALGYEDLNDHDALRHDLIFGLAS
GRLSGGRANCAALAGKSTLNRLERSGHKADRYCRIIADHEALATLFVTLFLDQHEHAP
ARIVLDVDATDDRIHGHQEGRAFHGYYGHNCYLPLYVFCGDHLLSATLRTADRDPGKE
ALADIRRIVEQIRSRWPRVRILVRGDSGFARDSLMTWCEDNHVDFLFGLAGNTRLYDR
IASLSAEVRDEAATTGRAARGFASFDWITKDSWTRRRRVVAKAEWRHGNRYHRFIVTT
LPQGMSDPRHLYEQIYCARGDMENRIKECQMDLFSDRTSSHTIRANQLRLWFSAAAYV
LLTALQRLALGQTSLETATCGTIRARLLKIATRVTLSVRRIVLSMPDMFPCQHEFALA
HARLRRLRQAI"
gene 114326..115231
/locus_tag="APA07_RS15105"
/old_locus_tag="APA07_42950"
CDS 114326..115231
/locus_tag="APA07_RS15105"
/old_locus_tag="APA07_42950"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813321.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012813321.1"
/translation="MKPDGRVFLKSVFGQISDEWPCISFSRSSVGNMLRQEFVPGRDI
LIYVGTLNGNLTEDPEHRGRLIAAVVIEPSQVLETRRIISKNFWSNLGEQWPHAMAVL
KAAVMEGPPYPKAHDVIPNAYRQFALMENRGGIAEAIGEERAAVMALPITPLDLHLSP
EVQAYINVRASVSETPKSIREEATRMADLIINRVRNGGTQRIVTNANRTAPNISDLYP
MLTRKWQVDQCGLCALCGGLLLPGTRNKMLQPSADRIDSSNEAYDEENVHITHLACNL
AKNKYGTDDFEEWLIALRGNDPRNE"
gene 115474..116307
/locus_tag="APA07_RS15110"
/old_locus_tag="APA07_42960"
CDS 115474..116307
/locus_tag="APA07_RS15110"
/old_locus_tag="APA07_42960"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813322.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012813322.1"
/translation="MNCNLSDKSICERSFQKNNARWYYPTHPNHSWFEGFSRNFLSPD
VRIWADYNDSVTEWYGWESRHLNDVKAPQDFVDRSAALKAVFDGAMFLYLGKIYQPII
FGAAEAHAVADQPFIRHLPESADVRVDPFSQIEINKTVVSTEYPFDNPVSTMLFAARY
DYVVRDILKYIGVQNLTYVTLYALHDWMTMKECGWTTNELASHAGWTKAELKDFTQTA
NNPAYLGPFCRHGGVDTPPKRPMPLDKAIDPILTATTAFIEKRIQSIDLQDKWDTLIA
P"
gene complement(116427..116702)
/locus_tag="APA07_RS15115"
/old_locus_tag="APA07_42970"
CDS complement(116427..116702)
/locus_tag="APA07_RS15115"
/old_locus_tag="APA07_42970"
/inference="COORDINATES: protein motif:HMM:NF013970.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type II toxin-antitoxin system VapC family
toxin"
/protein_id="WP_012813323.1"
/translation="MSIVSLWEIAIKIRIGKLDADMNDILAAIPAEGFSLLQIQPEHL
QILMSLPLHHRDPFDHLLMAQAQAEHATFLSEDGQMDHYPIKRIRCS"
gene complement(116742..117829)
/locus_tag="APA07_RS15120"
/old_locus_tag="APA07_42980"
CDS complement(join(116742..117568,117568..117829))
/locus_tag="APA07_RS15120"
/old_locus_tag="APA07_42980"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012476889.1"
/ribosomal_slippage
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="programmed frameshift; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/codon_start=1
/transl_table=11
/product="IS3 family transposase"
/protein_id="WP_088365092.1"
/translation="MKSDRFTDAQIMGVIRQAEGGVPVPDLCREHGISNATFYRWRAK
YGGMDASMISQMKALEEENRRLKRMYADLSMQTDILKEALGKKLKRPAQRRELAAQAV
AHHGVSIALACRIFGISETCFRYRPRLAAENDRIADLLVGLTQAHRRWGFGLCFLYLR
NVQGHVWNHKRVYRIYRELELNLRIKPRRRLVREKPEKLSVPALPNTVWSMDFMADRL
MDGRAFRLLNILDDFNREGLAIEVDFSLPACRVVRCLEQVMEWRGRPEAIRMDNGPEY
VSHTLVSWAEKQGITLIYTQPGNPQQNAYIERYNRTVRQEWLEQYLFESIQDVQEVAT
QWLWTYNHDRPNMGNSGLTPAQKLKTAA"
gene complement(118008..118346)
/locus_tag="APA07_RS15135"
/old_locus_tag="APA07_43010"
CDS complement(118008..118346)
/locus_tag="APA07_RS15135"
/old_locus_tag="APA07_43010"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813325.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="prevent-host-death protein"
/protein_id="WP_012813325.1"
/translation="MPQEFSTSSLCVHVMMTHGEETMSQHLSDNAPLPQKIGVREFRG
NLTAYLRQVRQGSTILVTSHDQVVAELRPPAPSYRPRRQPGALRGRIRMSEDFDETPP
DLLESMERDL"
gene complement(118354..118992)
/locus_tag="APA07_RS15140"
/old_locus_tag="APA07_43020"
CDS complement(118354..118992)
/locus_tag="APA07_RS15140"
/old_locus_tag="APA07_43020"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813326.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0006310 - DNA recombination [Evidence
IEA]"
/GO_process="GO:0015074 - DNA integration [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="tyrosine-type recombinase/integrase"
/protein_id="WP_012813326.1"
/translation="MEKKTRFPSPTLKASVPWNAGKMVGAKRALKEKHVWAIRFWLGS
EQRVRDRALFDLALDSKLRGCDLVSLRIGDIVTSGQVRHRAMVVQQKTRRPVQFEITE
TTRESVRAWLEHRGGGLNEYVFPSRLSAKAHLSTRQYARLLDQWVQAVGLIAGEYGTH
SLRRTKVAMIYKRTGNIRAVQILLGHSKLDSTVRYLGVDVEDALALSEATDL"
gene 119380..119577
/locus_tag="APA07_RS15145"
CDS 119380..119577
/locus_tag="APA07_RS15145"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019088954.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_010516885.1"
/translation="MLSVFGLDTMMFGAGGNPDFLDSVKIHEGNSEPNQKVEPDRMVA
ERDTEAVFILGSIGISDIIFK"
gene complement(119604..122738)
/locus_tag="APA07_RS15150"
/old_locus_tag="APA07_43030"
CDS complement(119604..122738)
/locus_tag="APA07_RS15150"
/old_locus_tag="APA07_43030"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019092215.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/GO_function="GO:0022857 - transmembrane transporter
activity [Evidence IEA]"
/GO_process="GO:0055085 - transmembrane transport
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="efflux RND transporter permease subunit"
/protein_id="WP_012813327.1"
/translation="MTGRSFSLQAAIIGFSIRFRGVVIATACLLFFYGLYGLRHASYD
VFPEFIPPRVTIQTEAAGFTPEQVETLVSRPMEIALSGLPGIQRVQSTSIQGLSVVNV
LFATSTDIYRARQLVGEQMNVVAQQLPAGVHAPTMTPLTSSAGLVLVIGLTSEQQSLM
QLRTLTDWSLRPRLLALPGVAGVSVFGGERRSLQIQVHPDQLILHHIGLDDVLAAAQE
ATGIQGAGFIDTPNQRVVLQSDGQALTPESLARTVIVRSDNGAVTLGSIATVTEAPIP
AFGAASIEGKTGIVVNIWEQYGANTMAVTREIEAALTDFRPQLQGQGITLHADLFRPA
NFITTALGNATQALLLGGFLVVVVIFLFLFDLRTAAICCATIPLAILIALSLLETLGV
TLNAMTLGGLAIAIGEVVDDAVIGVENVTRRLRENRLLVQPASTARVVLDACVEVRSA
VVYATFAVIIVFLPVIALPGLSGRLFAPLATAYVLAVMASLAAAVTVVPALCAWLLAT
PGETRREPPLAGWTARAYERLLARLMRHPRFVIGGMILTTLIGFAALPFLESDFIPDF
KEGHLIIHMTAAPGTSLEQSLKLGRQVTEKLRQLPEIRSVAQRVGRASLDEDTSGPHT
SEFEVDLNQVDGKASRQIDARVRKALDGFVGASFSVSSFLTMRVNETLSGSSSAVAIN
IIGDDLDVLDIQANNIVRMLHQIHGATDVRIEAPPGVPELAIRLRPTDLERWGLRSAD
VLRSIHTAWQGETVGQIYERSAAFNVMVRLDDASRNDVASVGFLPLHTVHGNYVPLRA
VADIYETNGRYQVSHLGAQRTQTVTANVTGRSAQSFVQDARTAIAKNIKLPLGTYVQF
TSAAEAESQSRKELFINSGLAAIAVMILLSIITQGWRNLALILVNLPFAFVGGILAII
VSGTTLTLGATVGFVTLFGITLRNSVMMISHFETLVEREHLTWGVTTALRGARDRVVP
VLMTSLVTALGLAPLAVDMNAPGREIEGPMAAVILGGLMTSMILNLFVLPILAVKFGS
FSENETGVPETLFK"
gene complement(122738..123772)
/locus_tag="APA07_RS15155"
/old_locus_tag="APA07_43040"
CDS complement(122738..123772)
/locus_tag="APA07_RS15155"
/old_locus_tag="APA07_43040"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003618801.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="efflux RND transporter periplasmic adaptor
subunit"
/protein_id="WP_003618801.1"
/translation="MKARAFWLPLVGLSVFLVLNVADIAIADDDDPPVSVLGAEATVT
VSPEAVTKSGIASARPSIVPWRKLVPAYGYVLNATQLITLVSDYADMKARLESMQAQQ
TLARAKLDRDKGLYRDRQNISQEQFQETTARFQSNSAMVKAEQVRVNNALNIIRQQFG
SVISDATEKNTIFITQLLQQQVVLVKVTLPPDTDLPTPPSQADVTDYGNTGGHGTMLH
YLSPVTMTDPAIQGRSFFYFASAESQLVAGMNVSVLLPTEEERPGIRIPASAIIWLQG
KSWIYRDNGHGKFTRLPLTTDVPDREGGYLIQDTPGQITHETQIVVGGTQLLLSEEFR
AQLESGGDDD"
gene complement(123769..125211)
/locus_tag="APA07_RS15160"
/old_locus_tag="APA07_43050"
CDS complement(123769..125211)
/locus_tag="APA07_RS15160"
/old_locus_tag="APA07_43050"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019088956.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="TolC family protein"
/protein_id="WP_012813328.1"
/translation="MYKSYNTLEYIKQVRRRTRYNAAFILLIFPLLCGCTNSDHSNIS
PESDVQKFSSRQFTDAGLQEFITKVLGPNVSSQENAWGITRLTLATLYFHPDILVAKA
ELETARAGIKTAGQLPNPSFTVLGGPSAHYVGYGASILIEFFGRRYHRIKEARYRAAV
AQWEVINTAWKLRSDTRSALLGVWAVSGRLKLVEETAAAKRELFTLEQARFDQGRASA
LEISQVRTEMIHAELSVSDLRREYAVRKAALAGAIGVPAEALDSIALDTKAFDVCPDL
MEYRDSQDMRYQAVMQRADLRELLASYDAARQALRVEVSRRYPDVTISPSYNWDFSNR
FEVNPSLQIPIFNQNEGPIAEAVGQEHEAAARLRRAENTVFKSISQATANYRGTTSIL
LQADELAKTVRVRLNQMQHRLQSGAIDRPTMVMTHIEQIQAETALLEAEIQQRQAIGQ
IEDGMQQPIFDHTSAAQVSGLLENNQRNSP"
gene complement(125204..125854)
/locus_tag="APA07_RS15165"
/old_locus_tag="APA07_43060"
CDS complement(125204..125854)
/locus_tag="APA07_RS15165"
/old_locus_tag="APA07_43060"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007284432.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/GO_function="GO:0008324 - monoatomic cation transmembrane
transporter activity [Evidence IEA]"
/GO_process="GO:0006812 - monoatomic cation transport
[Evidence IEA]"
/GO_process="GO:0055085 - transmembrane transport
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="cation transporter"
/protein_id="WP_010516881.1"
/translation="MAGGCCGGCTDTPLPINKSWRRALLIALFLNASMFAVEAGAGVS
VGSASVQADAIDFLGDSANYAISLSVAGMALRWRAGAAFLKGLTLFMAGLWVMANAGW
IVMNSNHPPHPDAMGGIGLLALAVNLACALILWTHRKGDANRRSVWICSRNDAIGNVA
VVLAALGVFGTRSAWPDIAVAAILAMLGISGGVQIMRQSRVELTDNKSDISRHINV"
gene 125928..126326
/locus_tag="APA07_RS15170"
/old_locus_tag="APA07_43070"
CDS 125928..126326
/locus_tag="APA07_RS15170"
/old_locus_tag="APA07_43070"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003618791.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="helix-turn-helix domain-containing protein"
/protein_id="WP_003618791.1"
/translation="MRSIGALGKATNTKVETIRYYERIGLLAPPQRTDGNYRTYDDEA
LARLSFIRRSRDLGFSLDQVRALLSLTDQGTQDCKTVDRIARDHMAEIERKIADLIAL
RHELSTMIESCGGGNISECRIIEALSPFDN"
gene complement(126648..127097)
/locus_tag="APA07_RS15175"
/old_locus_tag="APA07_43080"
CDS complement(126648..127097)
/locus_tag="APA07_RS15175"
/old_locus_tag="APA07_43080"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813131.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="phosphate-starvation-inducible PsiE family
protein"
/protein_id="WP_012813131.1"
/translation="MIKNIPGFEKISSIFDLFEEIAMLVLTLCIMVVAALGLIHVLYA
VFEMLRTATLSPTNPVVLQSLFGLFFTVLIALEFKHSILVSPDTPSHSMVRMRSVLLI
GMMATVRKFIVLDLSGLDVMEVLALSAAILALGIVYWLVRGNNKITS"
gene complement(127134..128456)
/locus_tag="APA07_RS15180"
/old_locus_tag="APA07_43090"
CDS complement(127134..128456)
/locus_tag="APA07_RS15180"
/old_locus_tag="APA07_43090"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813132.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="outer membrane beta-barrel protein"
/protein_id="WP_012813132.1"
/translation="MSDPFYAAFLSGESTTMMTRVYLDKSAFLKWTPRSGNVGFFLTA
AITMVLLDMNDAIAKPATEWLDDITLAGQIEGGINANVSRPANGINFGQFFGDRANQA
QLDQLTLTAARAVDTTASSYDVGFMVRGLYGADGRYFNIAGITDRLMTSRYQFIVPQA
HLDVHLPWLTRHGLDMQAGILASPMGVESLDPSLRPFYTLSYTTEYSTPFEHVGAMFQ
WHLTDHIDALFGVDTGNQVSFGGGDNNHTAAGYFGLTASSLANGKLSLTYLGRVGPEN
STRSLGQRANSAQRYWNDLSGSYKISDRLTFTGELNFLHDEGLHANTYSFVSYLSYQL
TPTLLLNYRGEIYRDDTGLFVTSFIANNAYMQATLGKPTVTQSAPPTTYGALTLGATW
RPVLGHSVKLFEIRPEVRFDRSLNGTRPFNDLRNVGQFTFGADAVLGF"
gene 128732..128821
/locus_tag="APA07_RS16330"
CDS 128732..128821
/locus_tag="APA07_RS16330"
/EC_number="7.2.2.6"
/inference="COORDINATES: protein motif:HMM:NF021144.2"
/GO_component="GO:0005886 - plasma membrane [Evidence
IEA]"
/GO_function="GO:0008556 - P-type potassium transmembrane
transporter activity [Evidence IEA]"
/GO_process="GO:0043462 - regulation of ATP-dependent
activity [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="potassium-transporting ATPase subunit F"
/protein_id="WP_082179775.1"
/translation="MTFELIMASVVTLGLLGYMTAVLLRPEKF"
gene 128824..130530
/gene="kdpA"
/locus_tag="APA07_RS15185"
/old_locus_tag="APA07_43100"
CDS 128824..130530
/gene="kdpA"
/locus_tag="APA07_RS15185"
/old_locus_tag="APA07_43100"
/EC_number="7.2.2.6"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813133.1"
/GO_component="GO:0031004 - potassium ion-transporting
ATPase complex [Evidence IEA]"
/GO_function="GO:0008556 - P-type potassium transmembrane
transporter activity [Evidence IEA]"
/GO_process="GO:0006813 - potassium ion transport
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="potassium-transporting ATPase subunit KdpA"
/protein_id="WP_012813133.1"
/translation="MSFYGWVAIMAFLICVIAMTRPLGGFLKRVLEGEQHVLGRIFGP
VERGIYRIAGIHKDREQSWSQYAIAVIVFKVICFIAVYTLLRVQGVLPLNPNGMGGVA
PDLAYNTAISFLTNTNWQSYGGETTMSHLTQMLGLTVQNFVSAAAGIAIAAAVIRGFA
RRSATSIGNFWADLVRTTLYVLLPICVVLALFFVLEGVPQTLLGSVTVSTLEGARQTI
AFGPVASQEAIKMLGTNGGGFFNVNSAHPFENPNALTNFVQMLAIFALGAGLTNMFGR
MVGRERQGWAIFSAMALLFLIGTGVAYWSEAHANPLITALGADPSAGNMEGKETRFGI
IGSALFATVTTDASCGAVNSMHESFLPLGGMVPLLNIMLGEIIFGGVGSGLYGFLLFA
IIAVFMAGLMVGRTPEYLGKKIEAREIKMTMLAVLCLPLVMLGFTALAVVVSPGLSAL
SASGPHGFTEALYAYTSAAGNNGSAFGGLTANTFWNVTLGIGMMAGRFFVIIPVLAIA
GAMAAKKTATPTPGTFPTDTGLFIALVTGVILIVGGLTFLPALALGPIVEHLAMLGGT
LF"
gene 130620..132653
/gene="kdpB"
/locus_tag="APA07_RS15190"
/old_locus_tag="APA07_43110"
CDS 130620..132653
/gene="kdpB"
/locus_tag="APA07_RS15190"
/old_locus_tag="APA07_43110"
/EC_number="7.2.2.6"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018181653.1"
/GO_component="GO:0031004 - potassium ion-transporting
ATPase complex [Evidence IEA]"
/GO_function="GO:0008556 - P-type potassium transmembrane
transporter activity [Evidence IEA]"
/GO_process="GO:0006813 - potassium ion transport
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="potassium-transporting ATPase subunit KdpB"
/protein_id="WP_041633169.1"
/translation="MQASLLLPAIRESFRKLDPRIMWRNPVMFVVEVVTILTTVLLIR
DIVAGGTHLGFAIQINLWLWFTLLFANFAEAVAEGRGKAQADSLRRTRTETLGKRLLM
NDEGGYSHLGLYEEVPAPELVVGDVVLVQAGDFIPSDGEVVDGIASVDESAITGESAP
VIRESGGDRSAVTGGTRVLSDWVIVRITAAQGSTFLDRMISLVEGAQRQKTPNEIALT
ILLAGMTLIFIFAVATIPSFVHYAGGHISVLILVALFVTLIPTTIGALLSAIGIAGMD
RLIRFNVLAMSGRAVEAAGDVDTLLLDKTGTITIGDRQATAFVPVSGVTEHELADAAQ
LASLADETPEGRSIVVLAKEKFGIRGRDMRDLGAHFVPFTAQTRISGVDVGDRQIRKG
AVDSVIASLGETLPSVEQIRQIADDIARQGGTPLAVADNTRLLGVVHLKDVVKGGIRE
RFAELRRMGIRTVMITGDNPMTAAAIAAESGVDDFLAQATPEAKLALIRSEQASGKLV
AMCGDGTNDAPALAQADVGVAMNTGTVAAREAGNMVDLDSDPTKLIEIVGIGKQLLMT
RGALTTFSIANDVAKYFAIIPAMFVGFYPALSALNIMHLATPESAVLSAIIFNALIII
ALIPLALKGVRYRPVGAASLLRRNLLVYGIGGLIVPFIGIKLIDMLVTSIGLA"
gene 132664..133287
/gene="kdpC"
/locus_tag="APA07_RS15195"
/old_locus_tag="APA07_43120"
CDS 132664..133287
/gene="kdpC"
/locus_tag="APA07_RS15195"
/old_locus_tag="APA07_43120"
/EC_number="7.2.2.6"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813135.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/GO_function="GO:0008556 - P-type potassium transmembrane
transporter activity [Evidence IEA]"
/GO_process="GO:0006813 - potassium ion transport
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="potassium-transporting ATPase subunit KdpC"
/protein_id="WP_012813135.1"
/translation="MTLIRQLRPALVIFGFLSVLTGLLYPLGITAISHLLLPEKAGGS
LVHENAQTVGSALIGQNFTQPRYFHGRPSATTGADPNDPTKTVPTPYNAAASMGSNAS
PTSRALIERVRIAVAQLKTENPDAIAAGWSIPMDLVTTSASGLDPDISPQAALFQVKR
VAHARNLPEQTVRQLVEHMIAHPLMGWLGEPHVNVLELNMALDALHR"
gene 133287..135974
/locus_tag="APA07_RS15200"
/old_locus_tag="APA07_43130"
CDS 133287..135974
/locus_tag="APA07_RS15200"
/old_locus_tag="APA07_43130"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813136.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="sensor histidine kinase KdpD"
/protein_id="WP_012813136.1"
/translation="MEAHLIRPDPDALLRQTVLDGESRKRGRLKVFLGAAPGVGKTFE
MLTVAHQLQRDGVDVVIGVVETHGRAETAALVNGLELVPLRTMTYRDRMAQEMDLDAV
LRRAPCVAAVDELAHTNVPGSRHPKRWMDVEELLAAGIDVLTTVNIQHLESLNDIVAS
ITRIRVRETVPDHVIGDADEVELIDLTPNDLLQRMRDGKIYAEHTAGRAMLHYFSPGN
LTALRELALRQTAQQVDAQLVDHMKANAIVGPWAAGERIMVCLTLQDGDASLLRYGKR
LADHLHAPWIVLHVETNRDLSDAARATMASQMHLAQSLGAELVTIPGQDVALDAVAYA
RTQNVTQIVAAHPVGRGWSARVRQWLGRSTTERLIQFAQGFPVHVVPRSPGENAPTEQ
LLNIAPFTARPYVVGTLIVLGALVVALLLRQSFEVSNVSLAFLTAILGVAVAYGLWPS
LWASLMAMLCFNFFFLPPFYTLTIAAPDNVVALFFFLVTALIASNLGARVRNQAVVAR
HRADITQSLYHFSRTITGILQLEDLLWSASHQIATMLDCDVAMLLPDGEILKVKASYN
GGKAVGAADLAAATWAWKNNKVAGRGSDNLPGGRWLFIPLRTGRGPVAVIGLHAERTG
PILDLEQQGLLDALADQTASAIESILLAGELDQARLDVETDKLRGALLTSISHDLRTP
LASILGATSSLESYGEELDENARKELLSTIHDEADRLNRFVANLLDMTRLEAGALQPR
KERVDIGEVIASALCRAARLLSDHETEMVIEPDLPMLLLDDVLLEQALFNILDNAGKY
TPVGTKIVVTASVAADTLLIRVTDEGEGFAAHDPETAFSKFKRFKSADRSRPGTGLGL
AISRGFIEALGGKIVSRNRKDCSGAELVMTFPLDEKNTK"
gene 135971..136654
/locus_tag="APA07_RS15205"
/old_locus_tag="APA07_43140"
CDS 135971..136654
/locus_tag="APA07_RS15205"
/old_locus_tag="APA07_43140"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813137.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="response regulator transcription factor"
/protein_id="WP_012813137.1"
/translation="MSNPSVLVVDDEPAIRRLLRTALGSQAWRVIEARTGEMALNMAM
EVVPDIVVLDLGLPDMDGVDVLRRLRSAHPTLPVVILSVRDDERGKVAALEAGADDYV
TKPFSMAELVARMRNAVRHALQQEGTIPLFVSGDLSIDLVRRQISRGESEIRLSPREW
DILRMLVRYAGRVLTHQTIMSQLWGATGDVQQLRVYIRQIRQKIEIDPERPRHIITET
GVGYRMVQL"
gene 136958..137527
/locus_tag="APA07_RS15210"
/old_locus_tag="APA07_43150"
CDS 136958..137527
/locus_tag="APA07_RS15210"
/old_locus_tag="APA07_43150"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813329.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="TetR/AcrR family transcriptional regulator"
/protein_id="WP_012813329.1"
/translation="MARPLSEEKRAAILRAATELVATIGISAATSQIAKRAGIADGTL
FTYFPTKDDLLNQLYLSIKSALAEAIMADYPSRAGVFERTRHCWDRLVNWGAEHPAQH
KAMRQLSVSDRISENTRDAVNLAFQDINRMIRDNLNRGAAGDESAAFVGALIIAMSDV
TLDCIAAHPEKIDLYRESGFQVFWNGIRS"
gene 137579..138406
/locus_tag="APA07_RS15215"
/old_locus_tag="APA07_43160"
CDS 137579..138406
/locus_tag="APA07_RS15215"
/old_locus_tag="APA07_43160"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813330.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="SDR family NAD(P)-dependent oxidoreductase"
/protein_id="WP_012813330.1"
/translation="MSKIWFVTGSSRGLGRDIVEAALAAGDSVVATARKPADLDAVVA
QYGDRVFPLALDVTDARAAQAAALRAKEHFGRIDVVVNNAGYANIASVEDITIEDFTQ
QVQTNFFGVAYVSKAVLPILREQGHGHIFQIASIGARIATPGLSAYQAAKFAVRGFSL
ALAQEMAPLGVKVTTIEPGGIRTDWAGSSMKIPPISAPYEQTVGTFVKMIRESSGHQS
SDPAKIASLIVDLANRADAPTELLVGVDAVEYAKQAAEAVTENDRKWRSLSITTAAD"
gene 138428..139216
/locus_tag="APA07_RS15220"
/old_locus_tag="APA07_43170"
CDS 138428..139216
/locus_tag="APA07_RS15220"
/old_locus_tag="APA07_43170"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003631091.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type 1 glutamine amidotransferase
domain-containing protein"
/protein_id="WP_245191575.1"
/translation="MKRAHILVYTSSATKIPLVGGGTHDVGIFLGELVEPIEPLIRAG
HLVEFVSPDGKGCVIDPASYRITNWGLSRSRMEHARNFFETTLQELGVGNPVKLSDIL
ADKTRLNSYDVVFIPGGHAPMTDVLHKDWLVSDEYNDQTGELLLHFHKNNKITSAICH
GSAALGAAPQVNGKWIYADYNMTCVSMAAEWLTEDIPFFNIGGHMPDYPVRILKRLGG
KVHTKMLGRSNVVEDRELITGQDPYSAKELGEKLMKKIEVRQNF"
gene complement(139994..143011)
/locus_tag="APA07_RS15225"
/old_locus_tag="APA07_43180"
/pseudo
CDS complement(139994..143011)
/locus_tag="APA07_RS15225"
/old_locus_tag="APA07_43180"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019956669.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/GO_function="GO:0016787 - hydrolase activity [Evidence
IEA]"
/note="internal stop; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="DEAD/DEAH box helicase family protein"
gene complement(143063..144325)
/locus_tag="APA07_RS15235"
/old_locus_tag="APA07_43200"
CDS complement(143063..144325)
/locus_tag="APA07_RS15235"
/old_locus_tag="APA07_43200"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813334.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="restriction endonuclease subunit S"
/protein_id="WP_012813334.1"
/translation="MTIAAYSKYDAYRDSGVQWVGQFPANWELARLGGLFEERRHKVS
DTDFEPLSVTKNGIFPQLANAAKTNDGENRKLVRAGDFVINSRSDRKGSSGISPLDGS
VSLINIVLEPKRILPEFCHHLLKSYAFVEEYYRVGRGIVADLWTTRYDEMRTILIALP
SPDEQRTIAAFLDGKCALIDEAVRIKEKQIRLLVERRQILIQQAVTRGLNPDAPMKDS
GIDWIGQIPAHWEVKRNKHMFVEINERSAKGEEQHLSMSQKLGLVPADLVEKSLASES
YQGAKLVRTGDLVLNRLKAHLAVFSLAPMEGLVSPDYSVFRPLVQGASSDYFEILFKT
SKYLGEFRLRVRGIVEGFYRLYTDDFMDCPLLLPPLDEQLQIVEHVRATTAQFHNVIA
IKESQITALREYKTSLINAAVTGKIKVL"
gene complement(144322..146715)
/locus_tag="APA07_RS15240"
/old_locus_tag="APA07_43210"
CDS complement(144322..146715)
/locus_tag="APA07_RS15240"
/old_locus_tag="APA07_43210"
/EC_number="2.1.1.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813335.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="class I SAM-dependent DNA methyltransferase"
/protein_id="WP_012813335.1"
/translation="MNQTSHSSLVSFIWRIADDCLRDVYVRGKYRDVILPMVVLRRLD
TLLEPTKDAVLEEVRYQKEDIGVTELDDEPLKDASGYVFFNTSHWTLKKLYNTATNNQ
QILLANIEDYLDGFSDNVKEIIGRFNLFEQMRHMAEKQVLLDVIEKFVSPWVNLTPND
IEDPEGNTLPGLSNLGMGYVFEELIRKFNEENNEEAGEHFTPREVIHLMTHLVFDPIK
DRLPQILTIYDPACGSGGMLTEAQNYITDADGPFHAHGDVYLYGKEINDETYAICKSD
MMIKGNNPENIRIGSTLSTDEFSAHRFDFMLSNPPYGKSWNSEVKYIKDGKGVIDPRF
QVKLADYWGNVETMDATPRSSDGQLLFLMEMISKMKPTSASPLGSRIASVHNGSSLFT
GDAGSGESNIRRFIIENDMLDTIIQLPNNLFYNTGITTYIWLLSNAKPEARRGRVQLI
DANLMFRKLRKNLGDKNCEFSDEHIQQITEAFLNFAPVERQIDAAGDPEGIAVQVFDN
ADFGYHKVTIERPDRRRAAFSAERLAPLRFDKSLREPMEWLYDEHGDQVYQPGFLKEQ
AKQITAWCEEAGLTLNAKAKAKLLDTRYWVKLRDLLATATQIMGDVGLEETDDFNAFR
KVVNAAIKARKIKLGVTEKNAILNAVSWYDETAQKVIAKKHKLTGAEVEELTTHLGCA
AEDLADFGWYRQKDGSYLTYESTAELRDAESVALKDNIHRYFLAEVKPHVEEAWINLD
SVKIGYEISFNKYFYRHKPLRSLEEVTQDILALEEKADGLIADILGVEVATKLETAE"
gene 147246..147539
/locus_tag="APA07_RS15245"
/old_locus_tag="APA07_43220"
CDS 147246..147539
/locus_tag="APA07_RS15245"
/old_locus_tag="APA07_43220"
/inference="COORDINATES: protein motif:HMM:NF024139.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="helix-turn-helix domain-containing protein"
/protein_id="WP_250698446.1"
/translation="MRYQEAADYLGIAKGTLANWVSQRIGPRSIKIGSMRLFRQEDLD
VFIEEKLFETERFEKRRRRQRGRGALVLTCQHPDLFLFSVLVLALAVFIFTVP"
gene complement(147588..148679)
/locus_tag="APA07_RS15250"
/old_locus_tag="APA07_43230"
CDS complement(147588..148679)
/locus_tag="APA07_RS15250"
/old_locus_tag="APA07_43230"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813337.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="site-specific integrase"
/protein_id="WP_012813337.1"
/translation="MTKSPKETLKDPVTGKPLPKGVWYRGPGQYQARRMVNGKRHRET
FASASLARRWLQDVRAKAHVGQLEPPARKRNQITFGELFERFGRERMTERDADRMGHL
PALLGSDIASLKIDKWTNSDVRNFRDAMLAAGLAKGTVVKRLNMIAAIVEYANSEWDT
TILNHASAKRTKRPEGADRKRNRRLKDGEEAELLRAASRPDGVFRHYPDVVWLIRWSI
EQGCRLGESLSLRWQDIDFRRQTISLARVKSDRHREELGPEIRPMTKGAQRVLMEKRA
TMEKVPDRKDVVFSVGERKIFSVLFGRMTRQAGIQDLTFHDLRHEATSRLARYLNPIE
LTRVTGHRDLKSLNRYYQPVPGDIADKTR"
gene 149027..149545
/locus_tag="APA07_RS15260"
/old_locus_tag="APA07_43240"
CDS 149027..149545
/locus_tag="APA07_RS15260"
/old_locus_tag="APA07_43240"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_006559683.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_246860445.1"
/translation="MYEDNEMRVEIRARLKGRIRYNVTTDQIEVMVGEDDELLRWETI
DRRTMSQHLPPTVIDRLWDMICDAAGSGVYADDRLAGVQFLGLHRIVDHLEREGLRIE
AVPVPSLSPPALVAVTLAAFLAARERTTLAEIMQNVIDVPPEKELLVMLKNAGWESRR
TATGRFWVKTRG"
gene 149668..151101
/locus_tag="APA07_RS15265"
/old_locus_tag="APA07_43250"
CDS 149668..151101
/locus_tag="APA07_RS15265"
/old_locus_tag="APA07_43250"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003630722.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012813339.1"
/translation="MTQNPSEKPKSRASAKVGTTVTKDNLKALGADRLADLLIELAGQ
DTALTRRLRMALTAVHAKDKLGKEIEKRLRTIQRSRGFLPWDRIRPLAAELDTLRQSI
LGDVASADVGQAISAMRLLVEIAPSVYERSDDSSGYLSDVFREAASDLGVLWGRQANR
DPAIVVTDLLTLLDDDGYGTCDRLLAACGTALGETGAAMLRTMLLARLRDLPASKGNS
DYHTDIARMQVIRHLRDLADAMGDVDAYSEAVSLSDRQYAYTGDVARRLLDKGRAREA
LDWLDRETEENSRFYKENDDLRIEAYEAVGDRDKAQALRWNVFRERLSLPHWKAYQRH
LSDYDAIDAEEQALDHIRNFPNRSVVLSTLLEWPALDEAARLVRHHTAELDGRDYGTL
RPAAERLSEAYPNEATLLYRLLVEAVLDRALSRYYAYAAKDLASCQRLAPMLTMAEGM
ESHETFMTRLKASHKRKLGFWSLIAVP"
gene 151207..151431
/locus_tag="APA07_RS15270"
/old_locus_tag="APA07_43260"
CDS 151207..151431
/locus_tag="APA07_RS15270"
/old_locus_tag="APA07_43260"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813340.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="AbrB/MazE/SpoVT family DNA-binding
domain-containing protein"
/protein_id="WP_012813340.1"
/translation="MLTRTTLFLSNRSQAVRLPKAVAFDVNLKDVVIIPDGARRIIAP
ANAAWDDFFAAPGTPLPERDQPRMQERESF"
gene 151431..151769
/locus_tag="APA07_RS15275"
/old_locus_tag="APA07_43270"
CDS 151431..151769
/locus_tag="APA07_RS15275"
/old_locus_tag="APA07_43270"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013481091.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="PIN domain-containing protein"
/protein_id="WP_012813341.1"
/translation="MLRYLLDTNFCIRVLRDRPQGLRERFNDNAEALCISDVVLYELL
YGAEKSHDPAKIRREVEHFAARLSVLPFDDDAAAHTAEIRAELEKRGCVIGPYDLMIA
GHARSRGLVC"
gene 151877..153400
/gene="istA"
/locus_tag="APA07_RS15280"
/old_locus_tag="APA07_43280"
CDS 151877..153400
/gene="istA"
/locus_tag="APA07_RS15280"
/old_locus_tag="APA07_43280"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012226833.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS21 family transposase"
/protein_id="WP_012813342.1"
/translation="MELLSVIRRWHCRDHLPIREIERRTGLSRNTIRKYLRAQSIEPR
FQVPERPSRLDPFADRLRGWLVLEAARPRKNRRTARRLHEDLVALGYDGSYGRVAAFI
RQWKHEQHQARQTTGRGVFVPLCFQPGEAFQFDWGEDWAVIAGRRVKLQVAHTKLSFS
RAFILRAYPLQTHEMLFDALTEAFRVLGGVPRRGIFDNMKTAVDRIGSGKARQVNLRF
MALASHYLFETTFCNPAAGWEKGQIEKTVQDARRQIWQDLPAFPDLGALNAWLEARCL
DCWERLQHIELARSIAEVHASERPHLMVPGRPFDGFVEQTKRVSPTCLIQFDGNRYSV
PASFANRPVSLRVYPDRLRIIAEGQVLCVHDRIITRSHGVPGRTVYDWRHYLAVIQRK
PGALRNGAPFTELPAAFRTLQDQLLRRPGGDREMAEILALVLQHDEQAVLCAVELALE
DGVATKTHVLNTLHRLIDAKRTVVPRLDAPQALVLEHEPCADTGRYDILRRDSRHAS"
gene 153390..154170
/gene="istB"
/locus_tag="APA07_RS15285"
/old_locus_tag="APA07_43290"
/pseudo
CDS 153390..154170
/gene="istB"
/locus_tag="APA07_RS15285"
/old_locus_tag="APA07_43290"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012553061.1"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/note="frameshifted; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS21-like element helper ATPase IstB"
gene 154499..154744
/locus_tag="APA07_RS16335"
/old_locus_tag="APA07_43300"
CDS 154499..154744
/locus_tag="APA07_RS16335"
/old_locus_tag="APA07_43300"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007400720.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type II toxin-antitoxin system CcdA family
antitoxin"
/protein_id="WP_080587162.1"
/translation="MVRVHSTSPLRRPTNVTLPAQLLEEARSLDLNISQACEQGLKSA
IASVRAQQWLAENRSSLEASRQYVEKNGLPLADYRNF"
gene 154745..155050
/locus_tag="APA07_RS15290"
/old_locus_tag="APA07_43310"
CDS 154745..155050
/locus_tag="APA07_RS15290"
/old_locus_tag="APA07_43310"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003630719.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="CcdB family protein"
/protein_id="WP_012813344.1"
/translation="MARFDVYCLAGRGEARFVLDVQADLLDELGTRIVVPLLSQKVAP
RPAKRLNPIFVVDDQSFVMMTQFMAAVPDRDLKKVVTSLSLYQDEIIQAIDLLLTGF"
gene 155107..155613
/locus_tag="APA07_RS15295"
/old_locus_tag="APA07_43320"
CDS 155107..155613
/locus_tag="APA07_RS15295"
/old_locus_tag="APA07_43320"
/inference="COORDINATES: protein motif:HMM:NF014898.2"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0015074 - DNA integration [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="site-specific integrase"
/protein_id="WP_250698451.1"
/translation="MPKADISYHNQLGKAANTRRAYRSAIRGWYVWAARHDLPALPAR
SEDVATYLADLALRERKPATIELHRAALRYLHHISHLPIPTTHALVSETLAGIHRSPR
KTPPRQVKGLTWEMICEVVDRIPMTSLVDARDRAILLLGYGGALRRSELAAIQLDAEI
SQKGCTSG"
gene 155671..157056
/locus_tag="APA07_RS15300"
/old_locus_tag="APA07_43330"
CDS 155671..157056
/locus_tag="APA07_RS15300"
/old_locus_tag="APA07_43330"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012812390.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS1380-like element IS1380A family transposase"
/protein_id="WP_012812390.1"
/translation="MQTECSAGAYEFPASCGRRVVARFDGGRMSSDGGVILVKQADDI
LGLSRRFAACFRDKRHPGFVEYRVEDLVRQRIMGLALGYEDLNDHDALRHDLIFGLAS
GRLSGGRANCAALAGKSTLNRLERSGHKADRYCRIIADHEALATLFVTLFLDQHEHAP
ARIVLDVDATDDRIHGHQEGRAFHGYYGHNCYLPLYVFCGDHLLSATLRTADRDPGKE
ALADIRRIVEQIRSRWPRVRILVRGDSGFARDSLMTWCEDNHVDFLFGLAGNTRLYDR
IASLSAEVRDEAATTGRAARGFASFDWITKDSWTRRRRVVAKAEWRHGNRYHRFIVTT
LPQGMSDPRHLYEQIYCARGDMENRIKECQMDLFSDRTSSHTIRANQLRLWFSAAAYV
LLTALQRLALGQTSLETATCGTIRARLLKIATRVTLSVRRIVLSMPDMFPCQHEFALA
HARLRRLRQAI"
gene complement(<157241..158272)
/locus_tag="APA07_RS15305"
/old_locus_tag="APA07_43340"
/pseudo
CDS complement(<157241..158272)
/locus_tag="APA07_RS15305"
/old_locus_tag="APA07_43340"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012553139.1"
/note="incomplete; partial in the middle of a contig;
missing C-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS701-like element IS1452 family transposase"
gene complement(158371..159504)
/locus_tag="APA07_RS15310"
/old_locus_tag="APA07_43350"
CDS complement(158371..159504)
/locus_tag="APA07_RS15310"
/old_locus_tag="APA07_43350"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003631182.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="MFS transporter"
/protein_id="WP_259293030.1"
/translation="MDAFCDPAIGYVVDRIGGLIVPRLIRSLAIPFGITGFLCFLALP
LSPTGKVVCAGATYIVFGAIYSCINTPYGALAVMMSRSASQRVGLNAFRMMGCQAGSL
LVALLTIPAITWLGGGESAAQHRYGMAVYVLALSVFGTFLWLCVARGCAVRYPPAPVR
QDLVSTLRHLLGNRRWVLSNLLAFFYFVGQAALFGFALYYARIVLGGTEQLGANIITF
VTVLLFAGVPACLPLARRMGTVGAGIICLIVQGIAYLAMAVAGASITGFFLSIALLAL
AQGVMSPLYYTLLAEAVDDGDSRTSTGSAGLAYSINTWVTKLAMGLTGFVLAQFLSQG
HYVEGGTTQSSDLSFWITAGFVWLPLGAVCLQVFCLLAWPDKK"
gene complement(159447..159650)
/locus_tag="APA07_RS17065"
CDS complement(159447..159650)
/locus_tag="APA07_RS17065"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_259293031.1"
/translation="MKEKIAYGCGDAASNMMWGMTSSYLMYYYTDIYACRWWLSHGYC
WWPVLWMLSAIRPSAMLLTVSAG"
gene complement(159804..>159941)
/locus_tag="APA07_RS17070"
/pseudo
CDS complement(159804..>159941)
/locus_tag="APA07_RS17070"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003631183.1"
/note="incomplete; partial in the middle of a contig;
missing N-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="alkene reductase"
gene 160029..161380
/locus_tag="APA07_RS15320"
/old_locus_tag="APA07_43370"
CDS join(160029..160365,160365..161380)
/locus_tag="APA07_RS15320"
/old_locus_tag="APA07_43370"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_076611865.1"
/ribosomal_slippage
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="programmed frameshift; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/codon_start=1
/transl_table=11
/product="IS3 family transposase"
/protein_id="WP_088365099.1"
/translation="MSQKSLPETTSGERLIRDIRRATRRQYSAEEKIRIVLDGLRGES
SIAELCRREGIAESLYYSWSKEFLEAGKKRLAGDTARNATTSEVRHLRDEARALKEVV
AEQTLELRLLKKKHDRGWGRPRMRYMASEKLEIIRLVEQSALPVRQVLGKIGIPRSTF
HRWCDLYRTGGPEALADKPSGPNRIWNRIADDIRAQIIDLALETPELSPREIAVRFTD
EQGYFVSEASVYRLRKAHDLIASPKFIVIKAAESFHTKTTAPNQLWQTDFTYLKVIGW
GWFYLSTILDDFSRYIIAWKLCTTMAASDVTQTLELALQASGPHQATVRHRPRLLSDN
GPCYVADELAKWLNQNSMDHVRGAPNHPQTQGKIERWHQTLKNRVLLEHYYLPGDLES
QIEAFVENYNQHRYHESLNNLTPADVWFGRGQTILFERERIKRATIQKRRLLHQQRAA
"
gene complement(161778..162113)
/locus_tag="APA07_RS15325"
/old_locus_tag="APA07_43390"
CDS complement(161778..162113)
/locus_tag="APA07_RS15325"
/old_locus_tag="APA07_43390"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813351.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_012813351.1"
/translation="MRSVLRHSGLLLTDGAHYLAANGAAWLIDVLASVQYLPAMRAEE
RQFWTLQVDLEKHAAVVVCTDGDKTGEGEIELYRQEIPYTDFPLNEAKLFAFREPGMG
RVVLLPSEY"
gene complement(162091..163203)
/locus_tag="APA07_RS15330"
/old_locus_tag="APA07_43400"
CDS complement(162091..163203)
/locus_tag="APA07_RS15330"
/old_locus_tag="APA07_43400"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813352.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ParB N-terminal domain-containing protein"
/protein_id="WP_012813352.1"
/translation="MTELRRVDPRTLVPNPNNPRKTQPDARAEHQLALNIKTVGLIHA
PCVRELEDGRLMIVAGHRRVRACIAAKLDEIDVHVRSGDEKSDTMAAVAENVVRADMT
ESEQWRGVLDMREKGATDTEICRAFMVTPAYLRGLMLLSQIHPPIIAAIDGGIGPSYT
ERNAIARTPLERQRDVWAEIWAESADEGVDPTDYEMSREEFAHFDWEDFVRYLDQVEL
YARDFEFDDETAQEAGVVWEEDLFGQGGQDNRYCTQFAAIFKAQQIWAEKKKPEGCVF
IPANEYGEGIVPEGHRSVGSWEMEQADDISTIWVSSRTLAIKTGRMRKITQRTAQSCE
EGSLSFSSAQSAEKPKERADISGTGQKIIGEVRTQA"
gene complement(163390..168516)
/locus_tag="APA07_RS15335"
/old_locus_tag="APA07_43410"
CDS complement(163390..168516)
/locus_tag="APA07_RS15335"
/old_locus_tag="APA07_43410"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012813353.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/GO_function="GO:0016787 - hydrolase activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DEAD/DEAH box helicase family protein"
/protein_id="WP_012813353.1"
/translation="MSMSASQLNLFDTTVLSGELAALWSLDDDQPIPEVCIPSPHPFR
IPQRDFRLNGVRGLAQGWKARAEANIAAIALLATLEREDRNATAAEQDVLARFTGFGA
GELANSLFPPTGREVRKGWESLASELEQLTTETERAGLQRATQYAHYTPELIVHSMWD
MALRMGFRGGSVLEPGCGTGLFIAARPEKLEGKIAFTGIENDPISARIARKLYPNQWI
RSEDFTRAQLPQGYDLAIGNPPFSNRTVHGRDGLEKLGLSLHDFFIARSIDALRPGGI
ALFVTSRYTLDKTDPNARRIIGESADLLGAVRLPEGAMRDDAGTDVVVDVLAFRKREM
GEEPSNESWVETADIPDSDEGNGPLVINRYFHDHPEQVLGSHIWTTTQFGPGYTCSAT
AGAELDLLLPQALNRIAPNTHFLPPREARIVRPAGEGVTIGTAASGADLKEGSYFVDR
SVLHQIIEGQAQIVPIRKAGQTEGIFAKHARIIRALVPIRDAARSVLRAQMQNLPYGA
QQRTLKTAYQSFVREFGPINHTRTTLRENPETGKTRETQRRPNLQPFMDDPDVWLVAS
IEEYDERTDTGRMGPIFSERVIHAPTEPEIHGAHDALAVSLHETGRVDLPLIAELLGR
SEADTLAELGESVYLDPERSVQGRDVWVTADEMLSGAVRTKLALSRDATQLDPRFARN
VSALEGVQPPDLRPSEITARLGAPWLPVTDIQDFVQEVMGIETTVRHTPEVACWSINR
APFLSRAEATSVWGTERRNAAELLEDALSQSIPKIWDHWRDENGNDRRELNTQETEAA
KEKLAAIKSAFEKWVWGDPERSDRLVKLYNETYNNLVPRAFDGSHLCLPGASSVITLR
AHQKRVVWRIIASGRTYMAHAVGAGKTFSMAAAIMEQKRLGLISKAVIVVPGHCLAQM
AREFLMLYPTARIIVADETNFVKAKRQRFIARAATENWDAIIITHDAFKFIPVEAGFE
REMIEDQIASYEAILSGLDGDDRISRKRIERMKEGMESKLEGLAAQKDDLLHMGEMGI
DQILVDEAQLFRKLSYATNQSDLRGVDPNGSQRAWDLFVKTRYLAKKDPTRPLIMASG
SPITNTIAELWNVGRYMDLDALVARNLHEFDAWAANFGETRTELELQPNGLYKPVTRF
TEFVNVADLMAMYRDFADVVQSDELSRYVKLPSVKSGNRQIVVAESTEDFRAFQQTLA
ERMRAIEARSGRPQKGDDIILSVMNDARHGAIDLRFIAPWADDDPHSKLNVMIRKVFE
IWHETSANRYTNPETGRAYDLPGAVQMIFSDLGTQASQTKRGFSAYNWIRSELIRMGI
PAEQIAFMQDYDKAAAKLRLFGDLNAGRKRILIGSTATMGTGVNAQQRLKALHHLDVP
WLVADIMQREGRIVRQGNQHDEVEIYAYAQQGSVDATNWQLLERKMRFIGLAMSGDRT
IRRIEDVGGEGNQFAMAKALASGDMRLIQKAGLEADIARLERLQAAHFDDQFNVRRQI
QRAERDIQTAQTRIPKIEAAIGQRVSTKGEAFALHRDTTVVESREKAGAWILSQARLA
EREGRTGQWSMGRIAGFEVMCEAHEQQFRTSDKRKPEVVSSIYLDTPAGEIEVETDRE
TKPLGLISRIEHAALRLDSDLAEARRSLDEAQRRLPAYRAREGLPFAEAADLKAKCAE
LYALDAELEAEGKEEGTALKLASANDDAASDVGEKIEEMA"
gene 168971..169606
/locus_tag="APA07_RS15340"
CDS 168971..169606
/locus_tag="APA07_RS15340"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019088964.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ParA family protein"
/protein_id="WP_081461418.1"
/translation="MLSSPKGGVGKSSLSRNILVLASRAGKNVLGLDMDKQATLATWA
ERRERVRAGISGVSEIPVRRVMLDDWRGALKEARNSTADFIVIDTPPSIEINMTAILG
LCEGADFVLVPCQQTQDDFDSVAPWMRHLKQSDVKAAFIINRANIRARSYATIRSKLM
NVGPVCPIEISQAEEISLANGKGLGVMDLSKPKNAEAFGALWAYLKQELDL"
gene 169603..170301
/locus_tag="APA07_RS15345"
CDS 169603..170301
/locus_tag="APA07_RS15345"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019092593.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_019088965.1"
/translation="MSKATSRRGVSLRALQDLDADEVPAFDARPQELRELTIVSSETL
ETISSVFSGTELANDQARIRVILETQRAVNAAWERAARSFLEIGRALNTLDNVLFSRE
EKNRLKSSFEEFFPFSEPVASQFRRIAHVVDSGRLDETSLPGSYSAAYQLSLLAPEEL
DIARAQGLVGPNTSRSAIIAFRKSIKRNISHVDFAALSTEARRLKSTRRHMLEQLIAI
RTRLKEIQTLLDED"
gene complement(170352..171106)
/locus_tag="APA07_RS16345"
CDS complement(join(170352..170767,170767..171106))
/locus_tag="APA07_RS16345"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_076611877.1"
/ribosomal_slippage
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="programmed frameshift; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/codon_start=1
/transl_table=11
/product="IS5 family transposase"
/protein_id="WP_087651418.1"
/translation="MRRYSLRDDQWERIKDLLPGREGYVGGTAVNNRLFVEAVLYRYR
AGIPWRDLPARFGDWKNVHRRLRRWCESGVIERIFRYLAADYDNEYMMIDSTIVRAHQ
HSAGALKKGARNQAIGRSRGGLTTKIHAICDALGNPVELGITPGQDADITQAEPLLEN
IEPDAFLADKAYDADRLIDRLIQRGITPVIPPKRNRTTRRKTDFSLYRERNLVERFFN
KLKQFRAIATRYDKLKSTFLAAVQFASIIILLN"
gene complement(171897..172820)
/locus_tag="APA07_RS15360"
/old_locus_tag="APA07_43440"
CDS complement(171897..172820)
/locus_tag="APA07_RS15360"
/old_locus_tag="APA07_43440"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_006115744.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="replication protein RepA"
/protein_id="WP_003631062.1"
/translation="MGQIHSLLDRFGVEEMRRLASLEDKTQRLCVEAAHEVMSDEDQA
IGIAHAGFAMAALPHKKISESIWRREGGSIQLLVESGLDKENKAVGVPFGAMARLILL
YLQTQAVRTRSREVELGSSMNAWLKAMGVSVGGKTYIAVRDQANRISRCRLTFTRINA
GAEIITNGAFVRDAIMPIESENGNQLSFWKEAVRLDEGFYESLIEHPLPLREIAIRQI
SNKSKAIDIYIWLAYRLHVLNDPLTLSWNTLKNQFGPEYKELRYFKKDIVTPLKIALS
VYPEAKVQMDDKYGIILYPSPPPIPEKRIGK"
gene complement(173313..174803)
/locus_tag="APA07_RS15365"
/old_locus_tag="APA07_43450"
CDS complement(173313..174803)
/locus_tag="APA07_RS15365"
/old_locus_tag="APA07_43450"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003625690.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0006310 - DNA recombination [Evidence
IEA]"
/GO_process="GO:0015074 - DNA integration [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="tyrosine-type recombinase/integrase"
/protein_id="WP_006115745.1"
/translation="MLDTLHITGSWPVLRSYVLEQVDRLTCQRLNDPQASIDVLRPIL
STAHFSPPLPVLIAGSALPDGSFLPDTELPRHAEHAAAAGEAVKATFPTLPSGYQIEL
ALEIDCEKLAFVATLVSSKISSNSGPRAEKEDTSKILPPAPIGQAPANVTRWFSALCE
IDIPEHDGRLETSQAAVGAFVQHGKSANTRRAYRSAIKGWCAWTNRHGLPALPARSTD
VATYLADLALRGRKPTTIELHRAALRYLHHIAQLPIPTAQALVTETVAGIHRSPGKEM
PRQVKGLTWDMMCEVIDAIPMTTLVDARDRAILLIGYGGALRRSELASIRLEYVTLDD
DCMRITLPQSKGDKQNKGTVVAIPRGITRFCPVRAWETWLRLSGLKPRKKTANDHSTT
AAFPRIWSPAASKPGVSPPLPKIGTQSLSDWSVAKIIKQRCLAAGLEGDFSGHSLRRG
AITTGAQDNYDLMALKRFSRHRDYRVLEAYIEDDQALTRHPGKSRF"
gene 174996..176246
/locus_tag="APA07_RS15370"
/old_locus_tag="APA07_43460"
CDS 174996..176246
/locus_tag="APA07_RS15370"
/old_locus_tag="APA07_43460"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012812328.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS701-like element IS1452 family transposase"
/protein_id="WP_012812328.1"
/translation="MIQDMMSGGTSVEETLELWARSLRSAKDRMAPLFTQKRVVDSAC
AFLDVLIGNEPRKTGWMRAEAAGDPGPWRQQALLGRGHWDADALRDVVRDYVIEHLGT
EEGVLVIDETGFLKKGQASCGVGRQYTGSAGKITNCQIGVFGAYVSERGHAFIDRALY
LPKDWTSKPERLKRAHVPDDVVFATKPALASMMIERSIEAGVPFRWVAADSVYGVGDV
ERTLRRAGIGYVLGVKGNHWFGSWATEPLIAGEAKDIAAGLPDQAWRRLSAGHGTKGE
RLYDWAYLPLADLDAEEFDCPIAGPWTRGLLIRRNIADGDLAYFTTWSPKGTTTQELV
NVEGTRWRIEEGFETAKNEFGLDHNETRSWHGWHRHVSLVMLAYAVMASVRYQANSLK
PKKTQLRTRQSLSAGPFRRSGASS"
gene 177446..177985
/locus_tag="APA07_RS15380"
/old_locus_tag="APA07_43480"
CDS 177446..177985
/locus_tag="APA07_RS15380"
/old_locus_tag="APA07_43480"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011252870.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="phosphate-starvation-inducible PsiE family
protein"
/protein_id="WP_012813355.1"
/translation="MEEISMKRSWHSRDWSRLVRLFNGLTFYERFEQAIILILIALIM
LVTAIATVHLISAVWHLIVDIGIDPIKQEIFQEIFGAIFTVIIALEFKHSLLVVLAQH
ENVIRVRTIVLIALLAVARKFILLDLNKVSAMELFALSVAVLALGIVYWLALQLHFVL
SSESMGNHDSGYDEWRYVC"
gene 177948..>178301
/locus_tag="APA07_RS15385"
/old_locus_tag="APA07_43490"
/pseudo
CDS 177948..>178301
/locus_tag="APA07_RS15385"
/old_locus_tag="APA07_43490"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012553139.1"
/note="incomplete; partial in the middle of a contig;
missing C-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="transposase"
gene complement(178369..>179348)
/locus_tag="APA07_RS15390"
/old_locus_tag="APA07_43500"
/pseudo
CDS complement(178369..>179348)
/locus_tag="APA07_RS15390"
/old_locus_tag="APA07_43500"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_076611849.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="frameshifted; incomplete; partial in the middle of
a contig; missing N-terminus; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS3 family transposase"
misc_feature complement(179158..179274)
/locus_tag="APA07_RS15390"
/old_locus_tag="APA07_43500"
/inference="COORDINATES: nucleotide
motif:Rfam:14.4:RF01497"
/inference="COORDINATES: profile:INFERNAL:1.1.4"
/note="AL1L pseudoknot; Derived by automated computational
analysis using gene prediction method: cmsearch."
/pseudo
/db_xref="RFAM:RF01497"
gene 179444..>180523
/locus_tag="APA07_RS15400"
/pseudo
CDS 179444..>180523
/locus_tag="APA07_RS15400"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012812390.1"
/note="incomplete; partial in the middle of a contig;
missing C-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS1380-like element IS1380A family transposase"
gene complement(180711..>181409)
/locus_tag="APA07_RS15405"
/pseudo
CDS complement(180711..>181409)
/locus_tag="APA07_RS15405"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012812390.1"
/note="incomplete; partial in the middle of a contig;
missing N-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS1380-like element IS1380A family transposase"
gene complement(181524..182774)
/locus_tag="APA07_RS15410"
CDS complement(181524..182774)
/locus_tag="APA07_RS15410"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012812328.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS701-like element IS1452 family transposase"
/protein_id="WP_012812328.1"
/translation="MIQDMMSGGTSVEETLELWARSLRSAKDRMAPLFTQKRVVDSAC
AFLDVLIGNEPRKTGWMRAEAAGDPGPWRQQALLGRGHWDADALRDVVRDYVIEHLGT
EEGVLVIDETGFLKKGQASCGVGRQYTGSAGKITNCQIGVFGAYVSERGHAFIDRALY
LPKDWTSKPERLKRAHVPDDVVFATKPALASMMIERSIEAGVPFRWVAADSVYGVGDV
ERTLRRAGIGYVLGVKGNHWFGSWATEPLIAGEAKDIAAGLPDQAWRRLSAGHGTKGE
RLYDWAYLPLADLDAEEFDCPIAGPWTRGLLIRRNIADGDLAYFTTWSPKGTTTQELV
NVEGTRWRIEEGFETAKNEFGLDHNETRSWHGWHRHVSLVMLAYAVMASVRYQANSLK
PKKTQLRTRQSLSAGPFRRSGASS"
CONTIG join(AP011137.1:1..182940)
//
