LOCUS NC_019737 28455 bp DNA circular CON 08-OCT-2023
DEFINITION Crinalium epipsammum PCC 9333 plasmid pCRI9333.07, complete
sequence.
ACCESSION NC_019737
VERSION NC_019737.1
DBLINK BioProject: PRJNA224116
BioSample: SAMN02261349
Assembly: GCF_000317495.1
KEYWORDS GSC:MIGS:2.1; RefSeq.
SOURCE Crinalium epipsammum PCC 9333
ORGANISM Crinalium epipsammum PCC 9333
Bacteria; Cyanobacteriota; Cyanophyceae; Gomontiellales;
Gomontiellaceae; Crinalium.
REFERENCE 1 (bases 1 to 28455)
AUTHORS Gugger,M., Coursin,T., Rippka,R., Tandeau De Marsac,N.,
Huntemann,M., Wei,C.-L., Han,J., Detter,J.C., Han,C., Tapia,R.,
Davenport,K., Daligault,H., Erkkila,T., Gu,W., Munk,A.C.C.,
Teshima,H., Xu,Y., Chain,P., Chen,A., Krypides,N., Mavromatis,K.,
Markowitz,V., Szeto,E., Ivanova,N., Mikhailova,N., Ovchinnikova,G.,
Pagani,I., Pati,A., Goodwin,L., Peters,L., Pitluck,S., Woyke,T. and
Kerfeld,C.
CONSRTM US DOE Joint Genome Institute
TITLE Finished plasmid 7 of genome of Crinalium epipsammum PCC 9333
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 28455)
AUTHORS Gugger,M., Coursin,T., Rippka,R., Tandeau De Marsac,N.,
Huntemann,M., Wei,C.-L., Han,J., Detter,J.C., Han,C., Tapia,R.,
Davenport,K., Daligault,H., Erkkila,T., Gu,W., Munk,A.C.C.,
Teshima,H., Xu,Y., Chain,P., Chen,A., Krypides,N., Mavromatis,K.,
Markowitz,V., Szeto,E., Ivanova,N., Mikhailova,N., Ovchinnikova,G.,
Pagani,I., Pati,A., Goodwin,L., Peters,L., Pitluck,S., Woyke,T. and
Kerfeld,C.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (05-JUN-2012) US DOE Joint Genome Institute, 2800
Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA
COMMENT REFSEQ INFORMATION: The reference sequence is identical to
CP003627.1.
URL -- http://www.jgi.doe.gov
JGI Project ID: 4087140
Source DNA and Organism available from Cheryl A. Kerfeld
(CKerfeld@lbl.gov)
Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov)
Tanja Woyke (microbe@cuba.jgi-psf.org)
Whole genome sequencing and draft assembly at JGI-PGF
Annotation by JGI-ORNL
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##MIGS-Data-START##
investigation_type :: bacteria_archaea
project_name :: Crinalium epipsammum PCC 9333
collection_date :: Missing
lat_lon :: Missing
depth :: Missing
alt_elev :: Missing
country :: Missing
environment :: Missing
num_replicons :: 9
ref_biomaterial :: PCC 9333
biotic_relationship :: Free living
trophic_level :: Missing
rel_to_oxygen :: Missing
isol_growth_condt :: Missing
sequencing_meth :: WGS
assembly :: Newbler v. 2.3 (pre-release), VELVET v.
1.0.13, Parallel phrap v. 4.24 SPS
finishing_strategy :: Finished
GOLD Stamp ID :: Gi04308
Funding Program :: DOE-GEBA 2009
Gene Calling Method :: Prodigal, GenePRIMP
Temperature Range :: Mesophile
Gram Staining :: Gram-
Diseases :: None
##MIGS-Data-END##
##Genome-Assembly-Data-START##
Finishing Goal :: Finished
Current Finishing Status :: Finished
Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v.
1.0.13, Parallel phrap v. 4.24 SPS
Genome Coverage :: 30x
Sequencing Technology :: 454/Illumina
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Date :: 10/08/2023 13:50:09
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 6.6
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA
Genes (total) :: 5,090
CDSs (total) :: 5,032
Genes (coding) :: 4,873
CDSs (with protein) :: 4,873
Genes (RNA) :: 58
rRNAs :: 4, 4, 4 (5S, 16S, 23S)
complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)
tRNAs :: 42
ncRNAs :: 4
Pseudo Genes (total) :: 159
CDSs (without protein) :: 159
Pseudo Genes (ambiguous residues) :: 0 of 159
Pseudo Genes (frameshifted) :: 63 of 159
Pseudo Genes (incomplete) :: 102 of 159
Pseudo Genes (internal stop) :: 18 of 159
Pseudo Genes (multiple problems) :: 21 of 159
CRISPR Arrays :: 6
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..28455
/organism="Crinalium epipsammum PCC 9333"
/mol_type="genomic DNA"
/strain="PCC 9333"
/isolation_source="not provided; submitted under MIGS 2.1"
/db_xref="taxon:1173022"
/plasmid="pCRI9333.07"
gene 779..1744
/locus_tag="CRI9333_RS24350"
/old_locus_tag="Cri9333_4967"
CDS 779..1744
/locus_tag="CRI9333_RS24350"
/old_locus_tag="Cri9333_4967"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015180041.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0006310 - DNA recombination [Evidence
IEA]"
/GO_process="GO:0015074 - DNA integration [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="tyrosine-type recombinase/integrase"
/protein_id="WP_041227128.1"
/translation="MDDSTLVPKLPDLLMLANQTPDVLRDFVADKRSPKTKSEYVKDI
KDFFQFVTGNNPRPQQAVEFLELDRFQAVALVLRYKQNLIERGLKEATVNRRLAALKS
LVNYAFKVGKCAWTLADIKSERIKPYRDTTGIKPSEFKQMLAVSDRTTNRGKRDYAIL
RLLWDNALRRGEVSSLSIGDLDLDSRRLWILGKGRGSQKEAVALSIPTVNALQEWLQA
QRETDINKPLFISLDKASPGHRLSTTSIYKIVNAIAQDAGITKKLSPHRIRHSSVTAA
LEATNGDVRRVQKLSRHSNLNTLMIYDDNRLSHQGEITDLLADLV"
gene 1780..2238
/locus_tag="CRI9333_RS24355"
/old_locus_tag="Cri9333_4968"
CDS 1780..2238
/locus_tag="CRI9333_RS24355"
/old_locus_tag="Cri9333_4968"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015203082.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF29 domain-containing protein"
/protein_id="WP_015180081.1"
/translation="MTTNLKLTSYQELYHIDYYKWLDTTAQLLRNHQFDDVDFDNLIE
EIEAMSGSQRRELENRLRVLLMHLLKYKYQPERRSNSWLNTIDEQRNQLELLLEYSPS
LKPFYSEVFDKCYVKARRSAANETGLSINTFPSDSPFTQDDTLNPDWLPE"
gene 2456..2590
/locus_tag="CRI9333_RS28210"
CDS 2456..2590
/locus_tag="CRI9333_RS28210"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_269667537.1"
/translation="MTSAVQGAAVNQYAVELSESAVQQCNCSNQLKCSAVRNSSETVQ
"
gene complement(2941..4560)
/locus_tag="CRI9333_RS27960"
/old_locus_tag="Cri9333_4969"
CDS complement(2941..4560)
/locus_tag="CRI9333_RS27960"
/old_locus_tag="Cri9333_4969"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_015180082.1"
/translation="MVARKRTEQSERELATAPSGAGSKSRAAASSQIDITKELDQLGS
TVEQANTDLELQLGGNQSADHDAGRNNSTTRNSQPTASPTSGISEADISQQFEEINRI
HEGTRRRRKAELSELKEDLAAGISELEKEIDDSSPMAIAQKNWESSPAWQHRPEWERN
FLTCAFEELKKTAENFQCIEGATFKDEKYMAYMVNPKSLYIKVVGQPVIAYESYRDKE
ARQCLLTPEQKQAFLPPGQQLEINHEAEQQISIGEEAPNELQLNDATAPEYASNLNHQ
TALTVPSDPTIPTNQTDSTVQHPTVPTVPTELNQDDDQTDDDESVNVDPREENWQPLR
SYLIEDCCLPSDILDALHEEGWIYANNEDMAVFSLRTSQNVETGVWVLDPETESNTWI
DLNLDPEVEKEVNGEPAYFWVSSLSDAPINKVIITSDPIETISSIALDPSFGQNNTLY
IATESAEQLPIEPLQKLGKNVVVSFKGDEDGIELANEVMSVLPNSQKVELDEAGWNGI
LQAQEQERQAEIEQMQLIAQYQEKQQSQMEL"
gene complement(4741..5190)
/locus_tag="CRI9333_RS24365"
/old_locus_tag="Cri9333_4970"
CDS complement(4741..5190)
/locus_tag="CRI9333_RS24365"
/old_locus_tag="Cri9333_4970"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015201448.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_015180083.1"
/translation="MDDLSSKTSKLAPKVRATQSQDLATRALRIKEAIAQLRQEIEHL
ELEGNIAPPDVWVMRYKARSRTGYYWYYKLQAKEAIFPQKIDSSKRSKYKHLGKAGSS
EHIDAVMLVARRGKIDACARAISSLYESWLSLYSESQPESTPESTPK"
gene 5286..6860
/locus_tag="CRI9333_RS27965"
/old_locus_tag="Cri9333_4971"
CDS 5286..6860
/locus_tag="CRI9333_RS27965"
/old_locus_tag="Cri9333_4971"
/inference="COORDINATES: protein motif:HMM:NF040081.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF6399 domain-containing protein"
/protein_id="WP_015180084.1"
/translation="MNVRQRCFDISQACWNHGQKSLRKIAQVTQISKSSVHRHQQAMK
RRDLHPESYLWEIPEAYQWLRLLVFATLYIFGIQQGVGCEAISRFFHILRLQNVIGVS
PSSLRRIEAQMREQILNYQVQMQQQLENHSAPIEVRAGADETFFPEVVLVLMDLVSGY
IILEDYSTDRQYLTWSQKAKSALNNLGTTVIVKSLVSDRASALIQLAVHMGCLSIPDL
FHAMRGISRVIGCRFGNRLNQIKKQLRTLHNQALNYSGHSQSIPKKLAQKIAVLQEQY
NFLLTGKLAYHNILHQITCAVHPFAIDGSGFQTTVDVATILYQQLPQLATLGYTYQIP
KLETAISTFSGQVSAIAAGINLWWQSVEESLQLEQVSPDLSNWLLGYFLPHFYWLSVI
KQTKNPALKEIYTQVSRHYSSHLLEHPLTSKVSKNEWIHWRSWAEQMSAQFQRSSSAI
EGRNGYLSRIHHCGRGISSKHLQVLTVIHNFDIQRADKTTAAQRLFNQEFPALFDWVI
SQMGDLPLPRKSYQII"
gene complement(7029..8129)
/locus_tag="CRI9333_RS24375"
/old_locus_tag="Cri9333_4972"
CDS complement(7029..8129)
/locus_tag="CRI9333_RS24375"
/old_locus_tag="Cri9333_4972"
/inference="COORDINATES: protein motif:HMM:NF015397.3"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="relaxase/mobilization nuclease domain-containing
protein"
/protein_id="WP_015180085.1"
/translation="MIGKQIISNGFGATSKYVLGKEDAELLYSNMGGANYQQLSQEFA
AIARLRPNNNRACLHAVLSLPHREDDQGEVIAHESLNNNQWVEIGQRWLEEMGFTDNQ
YLMVRHHDTKHEHLHIVANRIRLDGEVVPDSYNFFRSQAVIRKIEQDYELEAVTPSWE
THRRAPTTPELKEFERTGTGSVRLTIAELAQEAASNSPTMPEYLDRMKELGVEVKVNI
TRNDKVRGLSYSMGAYAFQGSDIGKDYSWNGLQQYLGVSYVQSRDFETISQGESRTNN
SKSRPARTSQQNESGDRTVEPTVSQPAAADHQFDPGKQLVQTAVNQLNRNTEQLTAAV
SQLDRSTDDFSRRLEQTNSNSRKRATNLRRDS"
gene complement(8126..8518)
/locus_tag="CRI9333_RS24380"
/old_locus_tag="Cri9333_4973"
CDS complement(8126..8518)
/locus_tag="CRI9333_RS24380"
/old_locus_tag="Cri9333_4973"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015186406.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_015180086.1"
/translation="MGVKAKRSDGAVRTIAWSVRFAADECDQLREKAYRAHTSVSEYI
RRAALGRKVIEPAPPPAVNIQTYRELSSIGNNLNQLVAAVNRAVLMEQDVNVDELKLS
RLIDGLQVSIKEVQVQLLTVETGEDNQQ"
gene complement(8886..9836)
/locus_tag="CRI9333_RS24385"
/old_locus_tag="Cri9333_4974"
CDS complement(8886..9836)
/locus_tag="CRI9333_RS24385"
/old_locus_tag="Cri9333_4974"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="CopG family transcriptional regulator"
/protein_id="WP_157462510.1"
/translation="MNLMNDEFDLPKVNIGARIPPAWAEELKELAINIGCSQTELITE
AIGRYLEKPIDKIVDRVTTLERKLDGFNDNGTVETVETGISSKLLNKLEQVIEINQTI
IKENTKTNQILIKKNSEINQTIFKENTELKNIIANLNNTIANLSHQLNNLSDQINNIQ
QQPPTENLTLVDTGGSPELIKKNEQVIEIDQAPIKETAKINQTIIKENTELKNTIANL
KNTIANQKNTIANLNHQIDNIKQQPPIERLIEPVSDNKFLGGLTQTELCIRSGINPGS
LAGKAKKAGLSPQEYLAERTGWEYRVRPGGKLGRWYPPEE"
gene complement(9940..10290)
/locus_tag="CRI9333_RS24390"
/old_locus_tag="Cri9333_4975"
CDS complement(9940..10290)
/locus_tag="CRI9333_RS24390"
/old_locus_tag="Cri9333_4975"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_015180088.1"
/translation="MPRKQQRIKDSDKKRQKIVERLQAKVDKPKDVTLRDFILSVKSK
IEEVLEAGYSYEEIAETFKLEGVEVAATTIKTYMADSRSNKTSGKKSKNQPDTPAESD
LPMESDTEADEEES"
gene 10832..11281
/locus_tag="CRI9333_RS24395"
/old_locus_tag="Cri9333_4976"
CDS 10832..11281
/locus_tag="CRI9333_RS24395"
/old_locus_tag="Cri9333_4976"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_016861354.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_015180089.1"
/translation="MSTANPLSQLRDAIKAQLAGVNIIPDPSRDITITFRVSHAEKLR
LESRCEGILQSDYIRARLFDYALPRRKTVMPVANREVRYHLKQIAANINQQSLDINQA
VKQGLQPLNKDVKAYSQKLKAVEVLIKELRKQLDLTTLSSDSQDDAK"
gene 11281..11814
/locus_tag="CRI9333_RS24400"
/old_locus_tag="Cri9333_4977"
CDS 11281..11814
/locus_tag="CRI9333_RS24400"
/old_locus_tag="Cri9333_4977"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_015180090.1"
/translation="MIGRIYTSKSFRATVGNVLEKTGALVIGGNMYGDDVESLTLEFM
VSRNLAPSVKSPCYHLVLSELPTDKSDEQLALLAERHFAAVIVLSRLKRDLSSVGVEN
KLSDKELNKLIDEFIDDGLAAYDYFVARSGAVDQYEVDIVASRINFINGVALATWKHW
EYVERSLQLLENRVQTG"
gene complement(11845..12237)
/locus_tag="CRI9333_RS24405"
/old_locus_tag="Cri9333_4978"
CDS complement(11845..12237)
/locus_tag="CRI9333_RS24405"
/old_locus_tag="Cri9333_4978"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015213717.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type II toxin-antitoxin system VapC family
toxin"
/protein_id="WP_015180091.1"
/translation="MVIDTSVLMAIIYAEPEELIFLELINESEDCLLSSPSYVEASIV
VGTKHGEQGIEKLKLLMEALSITITPFSAEQAQLASEAFLKFGKGRHPAKLNMGDCFS
YALAKSTNQPLLFKGNDFTHTDIDKVVY"
gene complement(12237..12497)
/locus_tag="CRI9333_RS24410"
/old_locus_tag="Cri9333_4979"
CDS complement(12237..12497)
/locus_tag="CRI9333_RS24410"
/old_locus_tag="Cri9333_4979"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_016950027.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_015180092.1"
/translation="MQQINIDARVDENGFIYLKMPPSLAGVEIKGTLLYQLPAQDSQN
IKGKKIDINAVRNICKDIRNLPTLDHRTPDEIIGYNDFGIPE"
gene complement(12712..12882)
/locus_tag="CRI9333_RS27140"
/old_locus_tag="Cri9333_4980"
CDS complement(12712..12882)
/locus_tag="CRI9333_RS27140"
/old_locus_tag="Cri9333_4980"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_015180093.1"
/translation="MDCIRQYRVATSNIYSELGDLKGCNIADHAPFHNNEYFEQGYKS
YPNTAIAVFTQN"
gene complement(13096..16254)
/locus_tag="CRI9333_RS24415"
/old_locus_tag="Cri9333_4981"
CDS complement(13096..16254)
/locus_tag="CRI9333_RS24415"
/old_locus_tag="Cri9333_4981"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015180077.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF3987 domain-containing protein"
/protein_id="WP_015180094.1"
/translation="MVANFKQRLPYQSGKNHPCPICDRTKDGDCKFSETEALCHTHID
GEPIGLNNSTHLLLWKYNGATKDRGWGQYRLDTRERQERKEIRAKSRKEYFYDDRNGN
RLIKVTRVDDGQGRKQFYQSHWDGQKWVSGLTEEVKKAVPIYKYQQVRSAIANGQPIF
MVEGEGVADALWELGIAATTTLGGSKKYRTYGDYSQDLVGASLVISPDRDECGLEHME
DINQDFPDAQWCYCFPDSPLWEHIPKNSGSDLADWIINDKATEKDIMNAVGAKRELKQ
FQPNDNSNSNVISHPTATREIYTNEEIDQKINQFISEGLSGSQLELQLANLAANSPHS
SSVIEKIYKAKLKECELFESRKEVADELDVLLLASSSTVELEKILPTDLANPITKLAS
WLSLRPEGYLTCLLTAVSTLHKVGTKIVLHNGMGFKVTPNLFAGIVAESSQKKSPIVK
AMVSEPLGILQGKAREEYNSSKKQYELDCSEWDRLKGDERRDRFPEGKPQKPVMKRYY
YSSSTNEGLVNQVTAYPEQGILANVDELAGLFKSANAYRNGRGSDEEDMLSFYDGTGS
SVLRADGMRADLEGLLLGIVGTIQPLTIQKMMQDCSDGNGKWARFIFVNQPLAASEMP
DDGGDIDLHLMLARLYENIDKLPATTYRLSPEAFQYFRGQYNKLEQKRVNDPNPGMRT
VWGKTEGRIGKLAINLHVIHELMNGRTPSEVIPLDIIKKAVRLAKFYCHQVQAMYSEF
SSGSLAPHLAKIIQLCERKQRAVTPKEISLTFPHSKRPKAEVVKIWFNELAAMGLGNV
EGKGRLVEFSSISTSSSLPVVTSSHSVVSPVVSQKPTQTHILQELQNSSSLSSQISPF
ASVDQLDGQNDLLQAQLVVEPVEERIENLTTETTETTESVFAIPVEDSSSSHATTEAT
TELTTETTGATTEIKIDLKIGSSVMINCPQSPKHNQIAQILRAAKTEGYWVVQFSDGT
DTILPTSNLPLVQQMALPLQESGIQVGDKVKDSKKEGVVVERYQQGSDFICGVDFGDK
IGVVYLSESELNKRFTRIGSKL"
gene complement(16248..16478)
/locus_tag="CRI9333_RS26335"
/old_locus_tag="Cri9333_4982"
CDS complement(16248..16478)
/locus_tag="CRI9333_RS26335"
/old_locus_tag="Cri9333_4982"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015180095.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_157462511.1"
/translation="MSGYPPIAIQKIRMVYKIMLTDVRPIQPHTTERITLLSGDELIQ
KTDALGLSSSIIFSQLLHINCTPSSFIGGAAW"
gene complement(16690..16857)
/locus_tag="CRI9333_RS27495"
/old_locus_tag="Cri9333_4983"
CDS complement(16690..16857)
/locus_tag="CRI9333_RS27495"
/old_locus_tag="Cri9333_4983"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015180079.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_015180096.1"
/translation="MLVMTNKGKKVVLHVEVEESTRTRLRLEAVRRGVTMGQLLEEIV
DKTIPPLDSRD"
gene 17081..17299
/locus_tag="CRI9333_RS24420"
/old_locus_tag="Cri9333_4984"
CDS 17081..17299
/locus_tag="CRI9333_RS24420"
/old_locus_tag="Cri9333_4984"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015179972.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_015180097.1"
/translation="MNDSSSSDGATSVLFPLFLCSIGLNVLQHAWNSNQLAILQQADN
LQQQKIAQLQTDKDVCAGKLAGFIEGRR"
gene 17299..17808
/locus_tag="CRI9333_RS24425"
/old_locus_tag="Cri9333_4985"
CDS 17299..17808
/locus_tag="CRI9333_RS24425"
/old_locus_tag="Cri9333_4985"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015205602.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_015180098.1"
/translation="MSNEVYTTAQAAEFLGISTNNLRVWKSRKSDQLIEGTHWVTGDN
NQVFWTPIGLEVLQQIKGATACNADITDDVIDPLQETVTQPLHQSDVDPLRRYSSLIN
AVADAITPGLMQRIDNAVTGRVKTAIATPMSPTECVTLLTELGLKPCNPELLLSGNQP
NLLTESKEN"
gene 17812..18321
/locus_tag="CRI9333_RS24430"
/old_locus_tag="Cri9333_4986"
CDS 17812..18321
/locus_tag="CRI9333_RS24430"
/old_locus_tag="Cri9333_4986"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015179974.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_015180099.1"
/translation="MGLLKFITRNKANISTEAGGQLANDGTNHNLATNKVLAATDKDV
ITPNNADFSSVRTAPIVKAPRYFNKAEADALRILAKQKKVQALASVSAYKALKNIEDS
DTTVHTTHRRYQSKVARTELEKQQANAQLAKDLHGLRPHYAEMHSEVKSAETNAANAI
NAIKQSYGY"
gene 18379..18645
/locus_tag="CRI9333_RS24435"
/old_locus_tag="Cri9333_4987"
CDS 18379..18645
/locus_tag="CRI9333_RS24435"
/old_locus_tag="Cri9333_4987"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015180023.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_015180100.1"
/translation="MGKSIQLGGYFLLGVSCCGLFSYTAYIIPRFQYYAFWLVVVVSL
LFIVCGLADDFLAEAMGVDYQSYIGGLIVCIAIVLVGSLIQWVK"
gene 18650..19318
/locus_tag="CRI9333_RS24440"
/old_locus_tag="Cri9333_4988"
CDS 18650..19318
/locus_tag="CRI9333_RS24440"
/old_locus_tag="Cri9333_4988"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015180101.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_015180101.1"
/translation="MIKISSPQDQLRSNRNLLALVGGSSTVIGLLLWSSSPFLFPNPK
DKFSVSLRYLSLFLTSCCGVTAVATGYQLQRITPLIKAIETAERNDFISQLATSQWVQ
EQRYQSEAVTALQPSQQQPVTLQQQNSYNERNDDTARDNEVSNEPVTDTLTTLPANAV
TPATDEEMEGYRPTYLAVTALQQQGISDSDIIKDVLKQGGTNYSKGKQMLDALLQLGQ
SKGW"
gene 19421..19663
/locus_tag="CRI9333_RS24445"
/old_locus_tag="Cri9333_4989"
CDS 19421..19663
/locus_tag="CRI9333_RS24445"
/old_locus_tag="Cri9333_4989"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_041227126.1"
/translation="MTLPGIISQLIPEACPAKRANTYALFVQHRWLADYSYLNELSQL
RSWNIVKKCKLLAPTRDISGRTLPPTTLIGTYIGPF"
gene complement(19660..19833)
/locus_tag="CRI9333_RS27145"
/old_locus_tag="Cri9333_4990"
CDS complement(19660..19833)
/locus_tag="CRI9333_RS27145"
/old_locus_tag="Cri9333_4990"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_015180103.1"
/translation="MVNTGVAKFRAGRNNAVTYGYKRLVTIDGLSVVSGLHLLSLTFS
VISPNAVLASLKS"
gene 20242..21762
/locus_tag="CRI9333_RS24455"
/old_locus_tag="Cri9333_4992"
CDS 20242..21762
/locus_tag="CRI9333_RS24455"
/old_locus_tag="Cri9333_4992"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_017653499.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_function="GO:0008170 - N-methyltransferase activity
[Evidence IEA]"
/GO_process="GO:0006306 - DNA methylation [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="N-6 DNA methylase"
/protein_id="WP_015180105.1"
/translation="MFEQTFKNIDDVLWKEAGCTTELDYTEQTSWLLFLKYLDDLEQE
RALEAELVDKPYEFIIDEAHRWSVWAAPKKADGTVDHDNALIGDDLIDYVNRKLFPYL
QGFKQRATSPDTIEYKIGEIFSEIKNRFQSGYSLRDALEYIDELRFRSQQEKHELSHL
YEAKIKNMGNAGRNGGEYYTPRPLIRAMIQVVKPEIGDRIYDGACGSAGFLCETYDYL
RRGKLTTKELETLQNNTFTGKEKKSLAYVIAIMNMILHGIDAPNIIHTNTLTENLTDI
QDKNRFDVILANPPFGGKERKEIQQNFPIKTGETAFLFLQHFIKILKIGGRAAVVIKN
TFLSNSDNASRALRQELLSSCNLHTILDCPSGTFIGAGVKTVVLFFDKAVPSDSVQGM
PLFAQGKPLNQGMATQKIWYYQLVPGRNMGKTNSLNDEDLREFVELQATFKETEKSWF
VDIADIDQVTFDLSVKNPNKAEESELREPQEILDEIAVLDEESVGILERIMQLTGS"
gene 21822..22040
/locus_tag="CRI9333_RS24460"
/old_locus_tag="Cri9333_4993"
CDS 21822..22040
/locus_tag="CRI9333_RS24460"
/old_locus_tag="Cri9333_4993"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_002753712.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_015180106.1"
/translation="MKNIKIIVEKHPDGYVAYPLGIQGVVVGEGDTYEEALNDVRSAI
LFHVETFGESVLESESSILEAFVAEANV"
gene 22040..22279
/locus_tag="CRI9333_RS24465"
/old_locus_tag="Cri9333_4994"
CDS 22040..22279
/locus_tag="CRI9333_RS24465"
/old_locus_tag="Cri9333_4994"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_016877318.1"
/GO_function="GO:0003729 - mRNA binding [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type II toxin-antitoxin system HicA family
toxin"
/protein_id="WP_015180107.1"
/translation="MTKFPVDAPKSKVIKVLEGFGFSIVREKEHISMIRQNPDGTTTP
LTLPNHKLIKGSTLRSICTQSGISRDDFIAAYEEV"
gene 22344..23573
/locus_tag="CRI9333_RS24470"
/old_locus_tag="Cri9333_4995"
CDS 22344..23573
/locus_tag="CRI9333_RS24470"
/old_locus_tag="Cri9333_4995"
/EC_number="3.1.21.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018940650.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0006304 - DNA modification [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="restriction endonuclease subunit S"
/protein_id="WP_015180108.1"
/translation="MQLTVDSGQLPVGWKVKKLAEVCQVEKSQGIYKNLPYIGMENIE
SNTAKFIGSTELQSVKSSTFRFNHKHILYGRLRPYLNKVLAPDFEGHCSTEIFPIKPS
ECLNRYFLLYWLLMDSTVKCINATCTGARMPRANMNSVFEFDFPLPPLTEQKRIVAIL
DEAFEGIDRAIANAEKNLANSRELFESYLNAIFTQKGDGWVQSKLSEVCEKITDGTHQ
TPKYFETGFVFLSSRNVTSGTINWDKVKYVDEAQHIAMQKRISPRLHDILLAKNGTTG
VAALVDKDIDFDIYVSLALLRPLAAILPRFMLHFVNSPVAKGQFNKRLKGIGVPNLHL
EEIREVTICYPQDLALQEAIVVKIDEMRSQILRLETIYRQKIAALNELKQSILQKAFT
GELTADTPKTVKEEIAA"
gene 23570..25909
/locus_tag="CRI9333_RS24475"
/old_locus_tag="Cri9333_4996"
CDS 23570..25909
/locus_tag="CRI9333_RS24475"
/old_locus_tag="Cri9333_4996"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015080266.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/GO_function="GO:0016787 - hydrolase activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type I restriction endonuclease subunit R"
/protein_id="WP_015180109.1"
/translation="MNEAETRAELIDPALKAAGWGVIEGSRIRREVIAPGRLVGNGKR
AKSDIADYVLVYHGEKLAVIEAKKRGLPDTEGLGQAKKYAEKLQTRFAYSTNGDRIYQ
VDMHTGAEGYINQYPTPDQLWNTTFSQANQWRDNFAAIPFEDRSGTWEARYYQHNAIK
HVLSAICQGQDRILLTMATGTGKTFIAFQLAWKLFQSRWNLSRQPTRRPRILFLADRN
ILANQAYNSFSAFPDDALVRIDPEAIKKRGRVPKNGSIFFTIFQTFMTGRDEAGNPTP
KFSDYPPDFFDFIIIDECHRGGASDESTWRGILEYFSPAVQLGLTATPRRANNADTYT
YFGEPVYTYALKDGINDGFLTPFKVRQIETNLDEYIYSSEDELIEGAIDEGRTYTEGD
FNRIIEISDRERYRVQLFMEEINQNQKTLVFCANQDHALAVRDLINQIKISSNPNYCV
RVTADDGKLGEQHLSTFQDNEKNIPTILTTSQKLSTGVDARNVRNIVLMRPINTMIEF
KQIIGRGTRLFDGKDYFTIYDFVRAYEHFNDPEWDGEPQEPVIVTNRRERQSSSTTNT
NRNTDTNSNENTETSRPQTIKIKLADGKERTFQHRISTSFWSPDGKPMSAAEFVERLF
GEIPQLFTNENELRAIWSRPDTRKALLEGLAEKGYAEEQLTEISRLIDAEKSDLYDVL
AYIAYASPPISRRERVLAHKSLIFSRYIGKQQEFLDFVLEQYIKAGVGELDRTKLPQL
LELKYHTVRDAVGELGSVANISEVFVGFQQYLYDLDRAA"
gene 26334..26900
/locus_tag="CRI9333_RS24480"
/old_locus_tag="Cri9333_4997"
CDS 26334..26900
/locus_tag="CRI9333_RS24480"
/old_locus_tag="Cri9333_4997"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_015180110.1"
/translation="MYSGVIVHNNSPEIKKNSSSTEKHGTSSGKNNISSEKNKGNNNK
EQEEKCKSLYKEAFKTYINQTQLGVISCGVKSVVSLAKNSAVGAGLEFAGCMLAQQAG
STYLLSDKLDSINQECTILYQGDSVKDEDDEDTLSMQHGMSSREKDYSLSPQGQTVAI
NYQPNKRSEFELNPETGKFYKPSNTAIC"
gene 27040..27366
/locus_tag="CRI9333_RS24485"
/old_locus_tag="Cri9333_4998"
CDS 27040..27366
/locus_tag="CRI9333_RS24485"
/old_locus_tag="Cri9333_4998"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_015180111.1"
/translation="MEFQFMEPRIEGYPVDWCCEINWAGWCSDQAHQLAADKYCQCMG
FDRSIGWSHTEHDKNPEKRPKITVAYTELMNHKFVVKTNKGNSMPWKFVHNPGGAFAW
ITCIRD"
gene complement(27558..28400)
/locus_tag="CRI9333_RS24490"
/old_locus_tag="Cri9333_4999"
CDS complement(27558..28400)
/locus_tag="CRI9333_RS24490"
/old_locus_tag="Cri9333_4999"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015179932.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_015180112.1"
/translation="MATDKKHIAVYLDKENEKSLMEYIKQHGGIKYSAAVNQILATFF
GNSLSNLPVTDELEATITRIVEEQLSNLLSITPSNVPSAEVLERLSILEKKLAHLSNI
PETISGNLLEQEVVEPEQILSNIPGITLNEVGSVSLEVAETARQLEEEAAEKLESLVV
EVDAIAQSPDTSDEPEAVAVEQDANAPVVDPKLNSLELELETALEPDLETDPGLSEAA
PVSEPVSEQTPNTETELLSGVQVCKLLKLKDYQLSKMNDDEIKAKGFERVKVGRKSKY
QKLF"
CONTIG join(CP003627.1:1..28455)
//
