LOCUS NC_021871 89986 bp DNA circular CON 27-APR-2023
DEFINITION Salmonella bongori N268-08 plasmid RM1, complete sequence.
ACCESSION NC_021871
VERSION NC_021871.1
DBLINK BioProject: PRJNA224116
BioSample: SAMN02603391
Assembly: GCF_000439255.1
KEYWORDS RefSeq.
SOURCE Salmonella bongori N268-08
ORGANISM Salmonella bongori N268-08
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
Enterobacteriaceae; Salmonella.
REFERENCE 1 (bases 1 to 89986)
AUTHORS Marti,R., Hagens,S., Loessner,M.J. and Klumpp,J.
TITLE Genome sequence of Salmonella bongori N268-08 - a rare clinical
isolate
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 89986)
AUTHORS Marti,R., Hagens,S., Loessner,M.J. and Klumpp,J.
TITLE Direct Submission
JOURNAL Submitted (03-JUL-2013) ETH zurich, Institute of Food, Nutrition
and Health, Schmelzbergstrasse 7, Zurich 8092, Switzerland
COMMENT REFSEQ INFORMATION: The reference sequence is identical to
CP006609.1.
Bacteria are available from the Swiss National Center for
Enteropathogenic Bacteria and Listeria (NENT). DNA is available
from the submitter's laboratory.
The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Assembly-Data-START##
Assembly Method :: SMRTanalysis v. 2.01
Genome Coverage :: 25x; 300x
Sequencing Technology :: PacBio; IonTorrent; Sanger
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Date :: 04/27/2023 01:47:19
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 6.5
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA
Genes (total) :: 4,618
CDSs (total) :: 4,501
Genes (coding) :: 4,336
CDSs (with protein) :: 4,336
Genes (RNA) :: 117
rRNAs :: 8, 7, 7 (5S, 16S, 23S)
complete rRNAs :: 8, 7, 7 (5S, 16S, 23S)
tRNAs :: 86
ncRNAs :: 9
Pseudo Genes (total) :: 165
CDSs (without protein) :: 165
Pseudo Genes (ambiguous residues) :: 0 of 165
Pseudo Genes (frameshifted) :: 78 of 165
Pseudo Genes (incomplete) :: 110 of 165
Pseudo Genes (internal stop) :: 38 of 165
Pseudo Genes (multiple problems) :: 48 of 165
Pseudo Genes (short protein) :: 1 of 165
CRISPR Arrays :: 2
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..89986
/organism="Salmonella bongori N268-08"
/mol_type="genomic DNA"
/strain="N268-08"
/serovar="Salmonella bongori N268-08"
/db_xref="taxon:1197719"
/plasmid="RM1"
/country="Switzerland"
/collection_date="2008"
gene complement(<126..>558)
/locus_tag="A464_RS22525"
/old_locus_tag="A464_plas0002"
/pseudo
/db_xref="GeneID:66758848"
CDS complement(<126..>558)
/locus_tag="A464_RS22525"
/old_locus_tag="A464_plas0002"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012543393.1"
/GO_process="GO:0015074 - DNA integration [Evidence IEA]"
/note="frameshifted; incomplete; partial in the middle of
a contig; missing N-terminus and C-terminus; Derived by
automated computational analysis using gene prediction
method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="integrase core domain-containing protein"
/db_xref="GeneID:66758848"
gene complement(<1662..2540)
/gene="repA"
/locus_tag="A464_RS25320"
/pseudo
/db_xref="GeneID:66759077"
CDS complement(<1662..2540)
/gene="repA"
/locus_tag="A464_RS25320"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_490498.3"
/note="frameshifted; internal stop; incomplete; partial in
the middle of a contig; missing C-terminus; Derived by
automated computational analysis using gene prediction
method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="plasmid replication initiator RepA"
/db_xref="GeneID:66759077"
gene complement(2840..3106)
/gene="repA"
/locus_tag="A464_RS22540"
/old_locus_tag="A464_plas0008"
/db_xref="GeneID:66758849"
CDS complement(2840..3106)
/gene="repA"
/locus_tag="A464_RS22540"
/old_locus_tag="A464_plas0008"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_490495.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="replication regulatory protein RepA"
/protein_id="WP_077909639.1"
/db_xref="GeneID:66758849"
/translation="MILEEAEMPQNENAVTSSSKRIYRKGNPLSSAEKKRLSILRKKT
THKELNVFIQNMHKESLQQLCEETGTTQAQMIELLIEREMAKRA"
gene complement(3270..3464)
/locus_tag="A464_RS22545"
/old_locus_tag="A464_plas0009"
/db_xref="GeneID:66758850"
CDS complement(3270..3464)
/locus_tag="A464_RS22545"
/old_locus_tag="A464_plas0009"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_449411.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_024143498.1"
/db_xref="GeneID:66758850"
/translation="MPKKHMCRWLLPGLLGLVLCAPVPNTYAATVEAGFSPEGTALQL
VLKTIETAQQEIVALSPGNT"
gene complement(3633..4211)
/gene="traX"
/locus_tag="A464_RS25330"
/old_locus_tag="A464_plas0011"
/pseudo
/db_xref="GeneID:66759079"
CDS complement(3633..4211)
/gene="traX"
/locus_tag="A464_RS25330"
/old_locus_tag="A464_plas0011"
/inference="COORDINATES: protein motif:HMM:NF017655.2"
/note="internal stop; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="type-F conjugative transfer system pilin
acetylase TraX"
/db_xref="GeneID:66759079"
gene complement(4214..4363)
/locus_tag="A464_RS26065"
/old_locus_tag="A464_plas0013"
/db_xref="GeneID:71766023"
CDS complement(4214..4363)
/locus_tag="A464_RS26065"
/old_locus_tag="A464_plas0013"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="IncF plasmid conjugative transfer pilin
acetylase TraX"
/protein_id="WP_020842460.1"
/db_xref="GeneID:71766023"
/translation="MSPGKSVALHPFRPVLNFSALQRDVIRMIAFMAMVGTTSPLPSS
WICPY"
gene complement(4360..4923)
/locus_tag="A464_RS22560"
/old_locus_tag="A464_plas0014"
/db_xref="GeneID:66758851"
CDS complement(4360..4923)
/locus_tag="A464_RS22560"
/old_locus_tag="A464_plas0014"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_000766821.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF2726 domain-containing protein"
/protein_id="WP_020842461.1"
/db_xref="GeneID:66758851"
/translation="MFTGIFIIAVLLAGFVVLLRQAGSARHPLLQMLREKGIRPGRTE
LLLCRRPSFVSAGQLMTAREQRFLRRLDRVTDTRHWRLCPQVRVADIVRVAPDRKSGS
REWWQLFRLVSQWHCDVVITDRTGRIIVAVELDDRSHQAPKRQRRDLLLEEVLKQAGI
RCCVAMMSSYWLSASGTPLRTTTETAA"
gene complement(4942..10237)
/gene="traI"
/locus_tag="A464_RS22565"
/old_locus_tag="A464_plas0016"
/pseudo
/db_xref="GeneID:66758852"
CDS complement(4942..10237)
/gene="traI"
/locus_tag="A464_RS22565"
/old_locus_tag="A464_plas0016"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_000949137.1"
/note="frameshifted; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="conjugative transfer relaxase/helicase TraI"
/db_xref="GeneID:66758852"
gene complement(10237..12486)
/gene="traD"
/locus_tag="A464_RS22570"
/old_locus_tag="A464_plas0017"
/db_xref="GeneID:66758853"
CDS complement(10237..12486)
/gene="traD"
/locus_tag="A464_RS22570"
/old_locus_tag="A464_plas0017"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001733785.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type IV conjugative transfer system coupling
protein TraD"
/protein_id="WP_024143499.1"
/db_xref="GeneID:66758853"
/translation="MSLNPRDLTQGGQVAFMRLKMFLQINNLISYYVIMGTVLFGIAV
LLMRMSIQNLTNGIIYWFVRVMSPFTEKMVSQPVYTIRYYEHNLQYSARQVLSDSYTL
YCGQLLKQELVIAGCAALLIAFLATLAVYWYLGRAGRKQSEDEIIGGRVLCESPKEVA
RMMKKRGEASDIRIDDLPLKLDSEIQNMAMHGTVSTGKSTLMRKILKQLRDRGDLVII
YDKGCTFVEDFYDESRDKVLNALDSRCPNWDLWEECRSIAELENASTTLIPASSGEDP
FWQGSARTIFAEGAERMRKDEDRSYNKFLRTLLAIKLDQLRAFLAGTPASTLVDGKIE
KTAISIRSVLTNYVKALRYLQGIDRPGREKFTIREWMKGQTDKSKNGWLFITSDEQNH
ESLKPLISLWLSIAATSLLAMGPNRQRRVWFFYDELASLHKLSSLPRIISEARKFGGC
FVLGFQNIAQMEEIYGPKAAAGLFDLLNTKFFFRSPSAEIAQFVEKDLGETRRKKFNE
QTSFGHEQVRDGISFGKEEERVTVVTYSDVQKLNDLQCYVTLPGDYPVVKLSMSYEAM
PKVADALLLRDVQTSLDQTLEDEIRRRSEEERHKFAGLFEGESLIQAVPGGAFIPKGN
LSNTPPPSADLVAAVLAEANTPPATWPLHTEGASGDADTENTASTAVGAEGGSASTGG
TERDIEQDLSQDIPPGLNSDGEVVDFAAYEAWAQTSHQTRDMTRREEVNINHATEKTH
DFDDDREVF"
gene complement(12637..13374)
/gene="traT"
/locus_tag="A464_RS22575"
/old_locus_tag="A464_plas0018"
/db_xref="GeneID:66758854"
CDS complement(12637..13374)
/gene="traT"
/locus_tag="A464_RS22575"
/old_locus_tag="A464_plas0018"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001485398.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="conjugal transfer complement resistance protein
TraT"
/protein_id="WP_020842465.1"
/db_xref="GeneID:66758854"
/translation="MKHNIKLMAMTAVLSSVLVLSGCGAMSTAIKKRNLEVKTQMSET
IWLEPSSQKTVYLQIKNTSDKDMSGLQAKVTKAVQDKGYTITSSPDSAHYWIQANVLK
ADKMDLRTAQGFLSQGYEGAIAGAALGAGITGYNSSSAGATLGVGLAAGLVGMAADAM
VEDINYTMVTDIQISEKTTASVQTDNVAALKQGTSGYKVQTSTQTGNQHKYQTRIVSS
ANKVNLKFEEAKPVLEEQLAKSVANIL"
gene complement(13550..14110)
/locus_tag="A464_RS22580"
/old_locus_tag="A464_plas0019"
/db_xref="GeneID:66758855"
CDS complement(13550..14110)
/locus_tag="A464_RS22580"
/old_locus_tag="A464_plas0019"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_032490372.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_020842466.1"
/db_xref="GeneID:66758855"
/translation="MKRSDLEKDAAYILDKFKQLDYEIPSNRQILKVIFYKLVIVYVF
QLLFIASDVFINSNVSEYHYFDTFVLSLGSNAFFSLVFLMSTYNLVSLKLSLGSEITE
QSVLLKLIERKINSYSLFLLAVNAIVGCILLSSGERFVAGLGFSWFVTYLISMLTLQT
SLSRYMTPAVVGSLSKVKELLSASPK"
gene complement(14122..17019)
/gene="traG"
/locus_tag="A464_RS22585"
/old_locus_tag="A464_plas0020"
/db_xref="GeneID:66758856"
CDS complement(14122..17019)
/gene="traG"
/locus_tag="A464_RS22585"
/old_locus_tag="A464_plas0020"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_000257544.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="conjugal transfer mating-pair stabilization
protein TraG"
/protein_id="WP_020842467.1"
/db_xref="GeneID:66758856"
/translation="MAVDTIYTVAGGAWFQDTLNGVAAFFNSRAGDSLIAMATAVSVI
VGAATYIRTRNIMDLVKWAGFYVLVIAVLVGDKRNVQIIDLSEPAAIYQVDNVPTGLA
APASLITRIGAGMAQVYDFVFARPDALTYSKTGMLFGAQLAAGSSDFRFSEPEIQRMF
SDYVHNCVVGDIMLNNKYSIGDLMNSTDPYALIFSKPSPLRGLYDKNRNFLTCEQATT
KINTDSSDISGRNMFPFLQQVLNRMHGFTNQVFGPTNGASTALFTEMLGDSYNYFHGN
SMTSTEIIRKNVVMNGLRSGLESFSAQNGDTAGLVNTATQTSMAKMRLSQATSASIAA
NTLPVMHSVLLGMTMALFPVLIVLAVVSSLSWTIIKGYIYTIAYLQMWPILFSILNHA
MNFYLQGKLNGTAVTLATFDQVQNTYSDIGTTAGWLALSIPFIAWGMVKGLGQVVSQA
GNYLGQTLQSASTQSSSQAIDGNWSYNNMTTGNVQGNKWDTNYSHREGHMTSQLESGA
TKTLTSSGQSVYNTTEAISKLPVDIALGKTASSSWQQQQRDALSEAQSLSNSLSQTSS
LATSQMSQWSQQRGNSDTTVTGSDASASSNLTKALNTIQSIGSRYARDENTTLAEGIR
AAATKSQDMSFGAGASVQGSVDSDRQILGKVAGLVTGGKVSGEAHLKGEYTGRSGSSH
GTSSDLTQQGGTSKGFSAQELKDFRDAMDVVSSSRVTDSGSHTDNASASLANQLSSTF
SSLKSQASQYNDAVTRSHEYSQLASYAENNSASINQNYSQEFVGYVTSQRPGEADQLL
SDAASPEVRAERDRLAQAFVEDRMKPQLLQEFEQNRGRTGEGMGSMGASSDGGNLQSE
YDTQQTQMENRANAGGVRLQDDVSSDVADRRRHAESQVNSEKNTVISSGNTPKQEYNR
LQSEHEQGNKNFSDAKSAEEKRQNDWIGDNGVGRKELNDIKDNLQKKFDQD"
gene complement(17021..18382)
/gene="traH"
/locus_tag="A464_RS22590"
/old_locus_tag="A464_plas0021"
/db_xref="GeneID:66758857"
CDS complement(17021..18382)
/gene="traH"
/locus_tag="A464_RS22590"
/old_locus_tag="A464_plas0021"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001808382.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="conjugal transfer pilus assembly protein TraH"
/protein_id="WP_020842468.1"
/db_xref="GeneID:66758857"
/translation="MRLKPLCLAFALGLYSAGTAHAALQDDMNSFFNDMSYASNTTSA
KAWQGQAARYVSGGSFYARTGNKNIQLVSISLPSINAGCGGIDVYLGAFSFINSDQIM
AFVKQTMANAAGYFFDLALETTVPELKAAKDFLQKMSADINRFNMSSCQAAKAMVDSV
ASLWGESQQNVCQSVGGQTSVFSDWVASRQGCTSGGKYGSVADKATGAEKDQVLKDIN
LMWDALGNSSLSSNAELRQFAMSISGSVIFGSNGELRILSSMASDRSLLTAMMSGGRA
KVYVCDNQNKCLSPTLNNVTISADKSLIKMVQDMLTSIENKAITDTPLTEKEKQFINS
TSIPILSWIVDQSSLSVSQSLFAQLTDYIAVDIYLQYLEAVMKVVNGSLATKDYPGAN
MKELKSGLADARQALNSLRMEVQIKEDALISAQQQIRFIRQQVSSKMSDRVLGNYQFS
RVN"
gene complement(18382..18993)
/gene="trbB"
/locus_tag="A464_RS22595"
/old_locus_tag="A464_plas0022"
/db_xref="GeneID:66758858"
CDS complement(18382..18993)
/gene="trbB"
/locus_tag="A464_RS22595"
/old_locus_tag="A464_plas0022"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001525738.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type-F conjugative transfer system pilin
assembly thiol-disulfide isomerase TrbB"
/protein_id="WP_020842469.1"
/db_xref="GeneID:66758858"
/translation="MLITVLRTAILMVAMLSGCLQAGTLDDIRALEAAKTGRSAPAMD
ALSLPENGAATTTDRAAQNTSPVWYSLNDGRKVNLQDWKVVLFMQSTCQYCRQFAPVL
KAFSQQTGLDVFPISLDGKGDAEFPDVLPATPDVMVEYFQSGLPVATPTTFLTNVNTM
ETWPLLQGAAGAGEFRARLDEVLRMALDRQAGKSIPLNAQGQQ"
gene complement(19017..19796)
/gene="traF"
/locus_tag="A464_RS22600"
/old_locus_tag="A464_plas0023"
/db_xref="GeneID:66758859"
CDS complement(19017..19796)
/gene="traF"
/locus_tag="A464_RS22600"
/old_locus_tag="A464_plas0023"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001403279.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type-F conjugative transfer system pilin
assembly protein TraF"
/protein_id="WP_020842470.1"
/db_xref="GeneID:66758859"
/translation="MRCIAGALALMMAASLHAAPEDVLAPDYAREEGWQWYNPNAEEP
EPEPASPPTLRERLASMTPSAQKKVLQQATREALDTAILYPSAENFRRFMTLQNFWTD
RATDFTQTAKLARLKYPELDYNVKRSHYNGTVEARLTEEKKVQSAVISQVAQRYGLFF
FYRGNNAVDNLMAGVIRAFCEDRGISLMAVSVDGKLSDQLPQSRPDSGQAEKMRVTHF
PATFLVDPKTHQWQPLAWGFMSHDDLDRQMVSVLTHFAPDY"
gene complement(19793..21622)
/gene="traN"
/locus_tag="A464_RS22605"
/old_locus_tag="A464_plas0024"
/db_xref="GeneID:66758860"
CDS complement(19793..21622)
/gene="traN"
/locus_tag="A464_RS22605"
/old_locus_tag="A464_plas0024"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_000821868.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type-F conjugative transfer system mating-pair
stabilization protein TraN"
/protein_id="WP_020842471.1"
/db_xref="GeneID:66758860"
/translation="MKRKLSLFVFTASVFMVQPLIANEQFNQGMQQGKANKGQGADAI
QGFKPAEVIPGYTTSPSESGYYGGVTSSGVDMTSPGSAALNSSEAGKTITESILNTPA
NNKPSLDAPFISEGLDMQAKAETITGGGFDGCVDQPASFTEITTHQCLRDTKIEQYCT
RTATIVGDWKETTEVKTYTLTAFNFSRSGKQIVFSVAAPEAGIIHSVSLNVTTQNYLW
NSRASFMNTTFNLTWNDTIALGGATGMVLTKGQTLSGTSCSGNGSCTGSLDDIIFNQF
VGGSSRFTLTLVMQVKSREWVPRVEWSESCPFSKSEGAMTGSQCVEPGGTRTVVVEGK
TYSIHQDCWKWQDTYLTQTETEGTCGEYMKDSACTVTRSQCADSVDGFCVSQQVTYSC
ERKKTGNGQICGGEFFCTDGSCAQGQTGTSNMFGQAVSALAAVAAAGEDVAELNGENV
RAFTGEAKFCKKMAAGFNNCCKDSGWGQDVGLSSCSSDEKALGKAKEKKLTVYVGEYC
NKKVLGVCLEKKRGYCQFDSKLARIVQEQGRRDQLGVGFGSGKSPDCRGITVDELQRL
DFGVMNFSDFYSDLDAGSDIPEDQALLKKAQDIIAEKMQENAP"
gene complement(21619..22233)
/gene="trbC"
/locus_tag="A464_RS22610"
/old_locus_tag="A464_plas0025"
/db_xref="GeneID:66758861"
CDS complement(21619..22233)
/gene="trbC"
/locus_tag="A464_RS22610"
/old_locus_tag="A464_plas0025"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_000832511.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type-F conjugative transfer system pilin
assembly protein TrbC"
/protein_id="WP_020842472.1"
/db_xref="GeneID:66758861"
/translation="MSNTLIFLLALLSSGLAQATEHTENRQFIKEQLRLDRQRFQSLQ
TPDFLKQDRPVAPQDQSFLDAQAQQFRQSMQPGERPVDAALVFVSFSMPSDELKQRVQ
DAAALNIPVVIRGMVNGDMRATANAVAGLVKESNTGGVQIDPTTFRKYNITAVPVLIV
ACGNQGDKVDRLQGDLTLHQALKLVAEEGDCAQTAKSLLGEGVQ"
gene complement(22230..22598)
/locus_tag="A464_RS22615"
/old_locus_tag="A464_plas0026"
/db_xref="GeneID:66758862"
CDS complement(22230..22598)
/locus_tag="A464_RS22615"
/old_locus_tag="A464_plas0026"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001525842.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_020842473.1"
/db_xref="GeneID:66758862"
/translation="MFVNKKKYELVLARYELAASRADQAEQVLAQLYDMALKYGGLYK
CILECREAAMAVNQPGRESTKLITERLAFIDRRLSDLLPFLTQQMQDGERLMWNDMLE
SRSAAMAYGLELQQPEEETL"
gene complement(22609..23610)
/gene="traU"
/locus_tag="A464_RS22620"
/old_locus_tag="A464_plas0027"
/db_xref="GeneID:66758863"
CDS complement(22609..23610)
/gene="traU"
/locus_tag="A464_RS22620"
/old_locus_tag="A464_plas0027"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_016529742.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="conjugal transfer pilus assembly protein TraU"
/protein_id="WP_020842474.1"
/db_xref="GeneID:66758863"
/translation="MNRLLILLLMAFAFSWSSVSNAATTSASVECEGRFVNPITDVCW
ECIFPVTIGNVPVAKGRQPDTPNPGMPIQFCPMGIFYRVGLAIGYWEPMALTDVTRSP
YCMVNLGGFNINVGNVGTGTGGQENRANPGAFYHVHWYKYPLTYWLNIITSMGCLQGG
DMDIGYLSELDPMWDSSSLSMIIQPEAILFGNVIAQAACAADAAASLVHMPLDPLFWC
AGSQGSMYPFNGWVSNEFSPMQTSLLLSERMAFKLHRQGMIMNSVGADTAVCFEYPSP
IIPKSRWRYHLVNKYPDAGQCHPLGRSVTRWETGKNMPNDRRNFGYLFWRKRNCVFL"
gene complement(23603..24241)
/gene="traW"
/locus_tag="A464_RS22625"
/old_locus_tag="A464_plas0028"
/db_xref="GeneID:66758864"
CDS complement(23603..24241)
/gene="traW"
/locus_tag="A464_RS22625"
/old_locus_tag="A464_plas0028"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001525788.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type-F conjugative transfer system protein TraW"
/protein_id="WP_020842475.1"
/db_xref="GeneID:66758864"
/translation="MKKGLLALLLISGVAQAKNLGTWGEMYPIAEQDMLTTIQTRLKA
MEASGEMAREQEAFKQRVIENTLRPRPVEGLTLAQENTTHYIDPSLTVSEDLKDHQGR
VFARKGQVINPLDTVPFTDTLYFIDADNPQQLSWMKAQKPGTLTYRVILVNGDIREAT
KALDTRIYFDQDGTLSRKFELKSIPARVTLSEDRRRLRVDTFALPGPGEAHE"
gene complement(24241..24675)
/gene="trbI"
/locus_tag="A464_RS22630"
/old_locus_tag="A464_plas0029"
/db_xref="GeneID:66758865"
CDS complement(24241..24675)
/gene="trbI"
/locus_tag="A464_RS22630"
/old_locus_tag="A464_plas0029"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_004558355.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type-F conjugative transfer system protein TrbI"
/protein_id="WP_001525791.1"
/db_xref="GeneID:66758865"
/translation="MKTEQQVNDTQSKPTTARKTLTQRERQRRRCLRSLLLVAATILC
INAAVTSLLISWRTPVVVSFDMKKTLDQFTEQAGAQSLDEPQTKALTERFMNSLNAEL
QEWQRRHDALILVTPAVVSGAGDITDEIQTGVAHRMAAGGGN"
gene complement(24672..27263)
/gene="traC"
/locus_tag="A464_RS22635"
/old_locus_tag="A464_plas0030"
/db_xref="GeneID:66758866"
CDS complement(24672..27263)
/gene="traC"
/locus_tag="A464_RS22635"
/old_locus_tag="A464_plas0030"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_000714154.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type IV secretion system protein TraC"
/protein_id="WP_020842476.1"
/db_xref="GeneID:66758866"
/translation="MKKFLNVLENLQNAFRMPDGASEMTRNLASLDFPQLTSVLPYRD
YDRDSGLFVNRSTVGFLLRAEPLIGANEQIVYVLEDLIKSKLPRKTPISFHLVSSKLI
GDQLDRGLSEFRWQGKHADKFNRITRAYYQRAAQQQFNSPTGLPLTLRDYRLYISYCV
KAKKRTAAVMTEVAHTLKVLRSSLDAAKIYTQAADDQELATLVHGMLNARHDQLYPDE
VRVGKFDELHQRCVDQRIGIDVRPDDVLISLADRQGSVTSTRAMNFMLENNPDMFMLW
MGGDNLSNLLSPDLTIASPFVITMVMEAEDQVATQGEATRKYLDRDKKANSPYATLFP
GVAKQAKEWKEIREHLNSNQTCIVRYYYNVTTFCPDTDEDALVCEQQVINTFKKNGID
LFSPTYMQFRNWIAMIPFIHAEGLWEDIKMGGATCRAESIQAVNLLPVVADNRLCQGG
LLTPSYRNQLAFLDIYGDGMGNTNYNMAVTGTSGAGKTGLVQPILRSVLDSGGIAWVF
DMGDGYKSFCENVGGTYLDGKSLKFNPFANISSINESGERIRDQLAVLASPNGTLDEV
HHSLLLRGVQEAWEAHREKARIDHVVQKLTAIREDDKYQNSPGITNRLDEIIELLGKY
CSWGIYGEYFNSDEPSLTDDARFIVLELGGLQDKPDLLVAVMFSLIIYIEDKMYRTPR
SLKKCCTIDEGWKLLNFKNEKVGQFIETGYRTVRRHRGAFITISQNIKDFDADDASGA
AKAAWGNSAFKVILKQDASEFKQYNQNRPNQFSELERSVIGKFGDAKDQWFSSFMLRI
NDTCSFHRLFVDPLSRAMFSSKGDDFEFIRQCREQNMDIHDAVYQLAQRNFPDEMREL
EALAEAA"
gene complement(27274..27873)
/gene="traV"
/locus_tag="A464_RS22640"
/db_xref="GeneID:66758867"
CDS complement(27274..27873)
/gene="traV"
/locus_tag="A464_RS22640"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_000724456.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type IV conjugative transfer system lipoprotein
TraV"
/protein_id="WP_024143502.1"
/db_xref="GeneID:66758867"
/translation="MKKITLLLAGSALLLSGCAGVKSSFDCDATTSDTCMTMTKANQL
ARDKAAKQAGKPAAGGLPSLVNLPATSAAAVPSASRSVVSVPSGARVTSNRPAVSAGT
ATGISTNAAASTLTPRPIAVTPITPVSRTNVSAVTPAPSCQSVRCDNPGSVHPQRSQD
QIATVWIAPWVDSDNAFHQPGRVSFVVSPADWVLPDRVN"
gene complement(27891..28340)
/locus_tag="A464_RS22645"
/old_locus_tag="A464_plas0033"
/db_xref="GeneID:66758868"
CDS complement(27891..28340)
/locus_tag="A464_RS22645"
/old_locus_tag="A464_plas0033"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008455349.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_024143503.1"
/db_xref="GeneID:66758868"
/translation="MMMDISSLLLRDFSDLTRPELIARLRRLKILQARVEYTRDNFSP
RQLKAFALAILLLVMAYALTDSLIFSGITCLVTLIGVLRYSRLPMTWHTQLKDGISRF
ESLRSSPLRQMDEADAHYDWHYASYCLAAEIQLIYSALSQPARPFSA"
gene complement(28631..28975)
/locus_tag="A464_RS26155"
/old_locus_tag="A464_plas0035"
/db_xref="GeneID:80368028"
CDS complement(28631..28975)
/locus_tag="A464_RS26155"
/old_locus_tag="A464_plas0035"
/inference="COORDINATES: protein motif:HMM:NF018947.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="conjugal transfer protein TraP"
/protein_id="WP_020842481.1"
/db_xref="GeneID:80368028"
/translation="MINKTLTLILYCLRWLAWAVHYLVIWPAGTLILIVALVFCLDKT
TPGMVVVDYLQEAGNITDGQRWTWRECTKQIPAGLPASSELPKVPTVFSRTRARRWSP
MPEVMQHMLTVL"
gene complement(28965..29186)
/locus_tag="A464_RS22660"
/old_locus_tag="A464_plas0036"
/db_xref="GeneID:66758871"
CDS complement(28965..29186)
/locus_tag="A464_RS22660"
/old_locus_tag="A464_plas0036"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001525693.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ATP-dependent protease Clp ATPase subunit"
/protein_id="WP_020842482.1"
/db_xref="GeneID:66758871"
/translation="MGSRKVNVMVVGETGAGKTTTLSQVTRIFLAKSDVSQLRELYSG
DDGERLAEAIRQNCNIWYPLKPGDGHHDK"
gene complement(29190..29414)
/locus_tag="A464_RS22665"
/old_locus_tag="A464_plas0037"
/db_xref="GeneID:66758872"
CDS complement(29190..29414)
/locus_tag="A464_RS22665"
/old_locus_tag="A464_plas0037"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_000786061.1"
/GO_function="GO:0008270 - zinc ion binding [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="TraR/DksA C4-type zinc finger protein"
/protein_id="WP_020842483.1"
/db_xref="GeneID:66758872"
/translation="MADVLDQLQEQEDLIHRLHIQAVRQQLSVKGESLTRCECCGNRI
QERRQKAIPGVRTCTECQRVLEIRGKNYQR"
gene complement(29524..30885)
/gene="traB"
/locus_tag="A464_RS22670"
/old_locus_tag="A464_plas0038"
/db_xref="GeneID:66758873"
CDS complement(29524..30885)
/gene="traB"
/locus_tag="A464_RS22670"
/old_locus_tag="A464_plas0038"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_000024510.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="F-type conjugal transfer pilus assembly protein
TraB"
/protein_id="WP_020842484.1"
/db_xref="GeneID:66758873"
/translation="MANVNKVVRRRQVALLIALVLGIGAGGAGTWMVSEMNLKKAPPA
KAPKGEPAPDMTGVVNQSFDNKVQRSAIAEAQRLNKETQTEIKKLRTEMGLVSRDLKG
SQDRIRELEDQNQLLQTQLEAGKNFDSLSAEPLPGALASQGKPAPAGNVPPPTSFWPA
GGGQAPAAPVMTPIQRPGMMDSQEFSLPDTGPKKPRFPWISSGSFAEAIVVEGADANA
SVTGDKNTAPMQLRLTGKVQMPNDEEFDLTGCFVTLEAWGDVSSERAIVRSRSISCKL
GDDDIDQKIAGHVSFMGKNGIKGEVVMRNGQILLYAGGAGFLDGIGKGIEKASSTTVG
VGATASMSAGDIGQAGLGGGVSSAAKTLSDYYIKRAEQYHPVIPIGAGNEVTLVFQDG
FQLETLEEVRAKAAARKKQNQPSASSTPAAMPGNTPDMLKQLQDFRVGDTVDPTTGQV
VTQ"
gene complement(30872..31612)
/gene="traK"
/locus_tag="A464_RS22675"
/old_locus_tag="A464_plas0039"
/db_xref="GeneID:66758874"
CDS complement(30872..31612)
/gene="traK"
/locus_tag="A464_RS22675"
/old_locus_tag="A464_plas0039"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008455355.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type-F conjugative transfer system secretin
TraK"
/protein_id="WP_020842485.1"
/db_xref="GeneID:66758874"
/translation="MKNNLPALLFGTAMMVVLPPAAQAQSPATISLPQGGQFRLSISN
TDPNMIFIPGDKVTAITAPGGMLADKRLTTAGGVLFTSVATRTFTIFVETALGQTFSV
VATPVKGEGRVYRLMSAEPPSRPETRKWETAQAYEKLLISLNRAVLTGDIPDGYGEVK
PLSDGIRLPGGFSVTPLKAWAGDQLRADRYELRNANTWGVALREQDFWKPGVRAVMFD
NNAQTLIGGGRMTVTVIRGNGEGEDGQR"
gene complement(31602..32165)
/gene="traE"
/locus_tag="A464_RS22680"
/old_locus_tag="A464_plas0040"
/db_xref="GeneID:66758875"
CDS complement(31602..32165)
/gene="traE"
/locus_tag="A464_RS22680"
/old_locus_tag="A464_plas0040"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001395451.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type IV conjugative transfer system protein
TraE"
/protein_id="WP_020842486.1"
/db_xref="GeneID:66758875"
/translation="MEISARNSSTKIIAVIILSLTTLVFILGFAVAWLAVTNRALIHE
QRIVVTPMTYNAPFVVSETKADTEYFRMMTLSFLALRLNVSPETVDSNHAFLMSFVEP
EAREEFKKVLQEEAAQIKANDVNSTFYTTEINVYPVDGRIDVRGVLKMWIGNSKPSTE
IKTYRLRLKYTGGFTRIGRFYEVTNEK"
gene complement(32185..32490)
/gene="traL"
/locus_tag="A464_RS22685"
/old_locus_tag="A464_plas0041"
/db_xref="GeneID:66758876"
CDS complement(32185..32490)
/gene="traL"
/locus_tag="A464_RS22685"
/old_locus_tag="A464_plas0041"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_032490353.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type IV conjugative transfer system protein
TraL"
/protein_id="WP_000398849.1"
/db_xref="GeneID:66758876"
/translation="MEGNDLDKYRFPKTLSEQNRIIGLPLDEAIPAAVVLLWGFFTKK
YLFSLIIAAVIWQLIRAAKRGKSSRWLYNWCYWYLPTELFRVVYRVIPDSSFRKWIK"
gene complement(32492..32851)
/gene="traA"
/locus_tag="A464_RS22690"
/old_locus_tag="A464_plas0042"
/db_xref="GeneID:66758877"
CDS complement(32492..32851)
/gene="traA"
/locus_tag="A464_RS22690"
/old_locus_tag="A464_plas0042"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008455360.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type IV conjugative transfer system pilin TraA"
/protein_id="WP_020842487.1"
/db_xref="GeneID:66758877"
/translation="MNLSLSKGGLPASVKKRAWQYCQMAWRGVTSKKALSRLAALSPL
LLLGVGQMANATDLLAGGKDDVKATFGADSFVMMCIIIAELIVGVAMYIRTKNLLILL
GLVVVIVFTTVGLTFIN"
gene complement(32960..33127)
/locus_tag="A464_RS25570"
/old_locus_tag="A464_plas0043"
/db_xref="GeneID:66759121"
CDS complement(32960..33127)
/locus_tag="A464_RS25570"
/old_locus_tag="A464_plas0043"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_154820138.1"
/db_xref="GeneID:66759121"
/translation="MIQDTPMKPRPAGKFIRLYLDGVVYEELRKKAKKNAKPVQKTAI
LIIEEALGLKE"
gene complement(33345..33626)
/locus_tag="A464_RS22695"
/old_locus_tag="A464_plas0044"
/db_xref="GeneID:66758878"
CDS complement(33345..33626)
/locus_tag="A464_RS22695"
/old_locus_tag="A464_plas0044"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008455362.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_020842489.1"
/db_xref="GeneID:66758878"
/translation="MVIIDPIRMEILRKIFPEINDVKIEVFTLFAFGMAIREISDYRN
TTTQAVYKTLKELCEQYSSPSNEALKTLYITRLALHSFLELRIELQPEE"
gene complement(34287..34673)
/gene="traM"
/locus_tag="A464_RS22700"
/old_locus_tag="A464_plas0045"
/db_xref="GeneID:66758879"
CDS complement(34287..34673)
/gene="traM"
/locus_tag="A464_RS22700"
/old_locus_tag="A464_plas0045"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008455364.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="conjugal transfer relaxosome DNA-binding protein
TraM"
/protein_id="WP_020842490.1"
/db_xref="GeneID:66758879"
/translation="MPRIQTFVSNQVREEIESLVTERRQEGATEHDATVSSVTSMLVE
LGLRVYRIQREKKEGGFNQMEYNKIMLDNMARVRAMCSEIMKMGALSHEVISNGNFDN
EVIKRSIAKFAEDQVSIFFPEEEETD"
gene 35142..35597
/locus_tag="A464_RS22705"
/old_locus_tag="A464_plas0046"
/db_xref="GeneID:66758880"
CDS 35142..35597
/locus_tag="A464_RS22705"
/old_locus_tag="A464_plas0046"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008455366.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="transglycosylase SLT domain-containing protein"
/protein_id="WP_020842491.1"
/db_xref="GeneID:66758880"
/translation="MKNVLLVGLLALTSSAIAQDCFEMAGRDYHIEPDLLRAISFRES
SWRPDAMNVVSNESYAVGMMQIHSQIFSHLAQYGITPGNLYRDPCMNIYTGAYYLAIA
FKRWGYSWRAVGAYNAGFRETEAQERKRQKYAQEIQEIYIGIKKNAPPK"
gene complement(35609..36139)
/locus_tag="A464_RS22710"
/old_locus_tag="A464_plas0047"
/db_xref="GeneID:66758881"
CDS complement(35609..36139)
/locus_tag="A464_RS22710"
/old_locus_tag="A464_plas0047"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_000556933.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="antirestriction protein"
/protein_id="WP_020842492.1"
/db_xref="GeneID:66758881"
/translation="MHTINVKTATRESAEQFKTDKFQRYCVTDGDERLDFIPALFFTP
SADNMIANWLRQHSDYDGGFWSYWIIPQGVGGNVAPNRIIFTTTQTGYIAPEGEQRYN
MCIPGNYFESEISADAAGIIATLMIMNWLSWQVADMGPEYARVCKHLVARQDALKDYV
SLIQHPERELIFRAID"
gene complement(36756..37589)
/locus_tag="A464_RS22720"
/old_locus_tag="A464_plas0051"
/db_xref="GeneID:66758882"
CDS complement(36756..37589)
/locus_tag="A464_RS22720"
/old_locus_tag="A464_plas0051"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_000080850.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_function="GO:0008170 - N-methyltransferase activity
[Evidence IEA]"
/GO_process="GO:0006306 - DNA methylation [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="N-6 DNA methylase"
/protein_id="WP_024143505.1"
/db_xref="GeneID:66758882"
/translation="MSQLSFADVFNMARESAGSKISTQDTQPGSESYPSVQRLMSAQY
SRSRFISVFRSTGRQLGRWEVFSDFLSLAASELDMVRIRTPESMAHCRKICARYEASD
IANMQEMFCLMVCALEAKFHDFLGAIFMELELGDNFRGQYFTPYSVQCLMARMLMPGV
RDTIRREGIATVSDPACGAAGMLIAYAECLLEADINPSMHMFGSCIDIDPVAADMAFI
QLSLLGIAAEVVTGNTLTMQFNRVRYTPVYYLNDFEKRLADLHRFRAMRDFMRRIQEA
A"
gene complement(37639..37785)
/locus_tag="A464_RS22725"
/old_locus_tag="A464_plas0052"
/db_xref="GeneID:66758883"
CDS complement(37639..37785)
/locus_tag="A464_RS22725"
/old_locus_tag="A464_plas0052"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001403164.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_001159047.1"
/db_xref="GeneID:66758883"
/translation="MQFDPQIVAQANAFVNALRSGKRARVPALKLKYWQQFMTVVYAG
LGLA"
gene complement(37880..38227)
/locus_tag="A464_RS22730"
/old_locus_tag="A464_plas0053"
/db_xref="GeneID:66758884"
CDS complement(37880..38227)
/locus_tag="A464_RS22730"
/old_locus_tag="A464_plas0053"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008455374.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_020842497.1"
/db_xref="GeneID:66758884"
/translation="MHLHLKESSALPGMQATAEAERAYWLSREKAAVRVPTEIDVHAF
HDELGLMYPMNWRSSENGECETFMLAEMICGNVTEIYARIGIHYYRMRDYSNLDHAEI
LARVKEVSDKSQK"
gene complement(38278..38652)
/locus_tag="A464_RS22735"
/old_locus_tag="A464_plas0054"
/db_xref="GeneID:66758885"
CDS complement(38278..38652)
/locus_tag="A464_RS22735"
/old_locus_tag="A464_plas0054"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008455376.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_020842498.1"
/db_xref="GeneID:66758885"
/translation="MNTQNVNVKTATKESSERWVKNTALRTDGFVRNIHACNPFDVIR
ADVVLARIEKAAGRCCGMHYELYQARVLGDALDYLDALPLKDRPALMGAAAKRGYILT
LAEEEHSLEAKDALMSELAANE"
gene complement(39422..39649)
/locus_tag="A464_RS26075"
/old_locus_tag="A464_plas0055"
/db_xref="GeneID:71766025"
CDS complement(39422..39649)
/locus_tag="A464_RS26075"
/old_locus_tag="A464_plas0055"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_020842499.1"
/db_xref="GeneID:71766025"
/translation="MRYWILVVLLNGLFALVMHFAAPEMFGSTAYYVGAGICALIAMV
ITWRDPPGMLDNVLLFLLKWGIVASGLAFFI"
gene complement(39947..40300)
/locus_tag="A464_RS22745"
/old_locus_tag="A464_plas0057"
/db_xref="GeneID:66758887"
CDS complement(39947..40300)
/locus_tag="A464_RS22745"
/old_locus_tag="A464_plas0057"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_000872088.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_024143506.1"
/db_xref="GeneID:66758887"
/translation="MKWRYSVRWRLPRTPCPGPQELVSEVVEAGKPAPESVMARWVAG
AGYAVCVDFLDERQIRRWSDERKAAARRRNLERRVNRIAPLFADEFIRRELDARPAYF
QGKTMNMPPKGGESC"
gene complement(40297..41025)
/locus_tag="A464_RS22750"
/old_locus_tag="A464_plas0058"
/db_xref="GeneID:66758888"
CDS complement(40297..41025)
/locus_tag="A464_RS22750"
/old_locus_tag="A464_plas0058"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_000611691.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="plasmid SOS inhibition protein A"
/protein_id="WP_020842501.1"
/db_xref="GeneID:66758888"
/translation="MIPASLSLVPLSHERRAAMQAIAEVEHKYARGAHVVEFAYAHAF
FRILNGSKRVTVKDIGWFSPGLTAQNLRGKKQDWLAAIDRLIESRGACCWLPLSVSDG
WRLFPETKFQTSERRRRQSELSAEKYTRQRRKEACQREMAYQALAGQAEIELAFHTPE
TVSSWSARWSGTELRQYDLEEMFWRWSERFPSLASMERWMMANQPFWSVMVESDALAK
ESPEPVRQMERWMVPNKLIHRSHA"
gene complement(41022..41456)
/gene="psiB"
/locus_tag="A464_RS22755"
/old_locus_tag="A464_plas0059"
/db_xref="GeneID:66758889"
CDS complement(41022..41456)
/gene="psiB"
/locus_tag="A464_RS22755"
/old_locus_tag="A464_plas0059"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_490557.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="conjugation system SOS inhibitor PsiB"
/protein_id="WP_077909643.1"
/db_xref="GeneID:66758889"
/translation="MMRNIVTPDVLKTMIPQEFEDWREAGEDLRRELIHAVMRDLTCP
ADWDMNGEYRSEFGGFFPVQVRFTPSHGNFHIAVCSPGDITPSWMVVFIPSSGRPFSV
ISTLPAYSPEVISHTLSLTARLDADGYSQASIISVLAMEGAQ"
gene complement(41497..43494)
/locus_tag="A464_RS22760"
/old_locus_tag="A464_plas0060"
/db_xref="GeneID:66758890"
CDS complement(41497..43494)
/locus_tag="A464_RS22760"
/old_locus_tag="A464_plas0060"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_002211744.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ParB/RepB/Spo0J family partition protein"
/protein_id="WP_020842503.1"
/db_xref="GeneID:66758890"
/translation="MSVTESKAKTPAKTSKKAVKPAEAAALKAALEAAQIEMVPLSAL
VKSPLNVRIIPYPVESVREMADSILAVGLIQNLVVHSLPDGLSGVAAGGRRLAALQLL
LSEQRIDAGYLVVVKRVSDDLAVVASMVENNQRAAMHPAEQISGFRTLSEQGKTPAQI
GDQLGYSSRHVQRMLKLANLAPELLALLAENKLDVEQCQALSLENDPVRQVEIYERVK
AQHSYAPAHMLKRAITDTEIGVNHSRFVFIGREMYESAGGVVREDLFSAQEGDGTADG
VLVGRLVQEKLESAALAIELQEGWSWSLAREGAVRNYGDDREHYLLLPEPEAQYTTDE
QQRLDELYATQEATETFEDEAAIQVLIDEIENAASIRAWTQEQKADCGVVVSLYDGEL
CVQRGVQKKPQNEAKEGQGDNGSSGSLHVVSSKPDVTEGISATLLKKMSSERTLAVQA
ALVQQPEKAVALMVWRLCSCVFDYCNTTRHPFVMRLEVHHSVLTSEAPTGKRGQAWLS
LMQEKARLEALLPDGWKKDFTTFFTLDGQTLMSLMVFCTACSVDGVQTRTMGHTTQSD
LDGVETALGFHLRDWWQPTAENFLGLLSKNQIVGALKEAGLSGAASDAGNMKKGDAAS
HAEQWLSGTRWVPAWMRSPDAQPDVAEGEATDSDDHTAHAA"
gene complement(43564..43806)
/locus_tag="A464_RS22765"
/old_locus_tag="A464_plas0061"
/db_xref="GeneID:66758891"
CDS complement(43564..43806)
/locus_tag="A464_RS22765"
/old_locus_tag="A464_plas0061"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_490555.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF905 domain-containing protein"
/protein_id="WP_024143508.1"
/db_xref="GeneID:66758891"
/translation="MTSNVIPPLQSLPDGTFTHEQAKAVAAQYQNVAIEDDQGTHFRL
VVRQNGEMVWRVWNFEPGGEYLMNRYIRDYGIRKQQ"
gene complement(43859..44413)
/locus_tag="A464_RS22770"
/old_locus_tag="A464_plas0062"
/db_xref="GeneID:66758892"
CDS complement(43859..44413)
/locus_tag="A464_RS22770"
/old_locus_tag="A464_plas0062"
/inference="COORDINATES: similar to AA
sequence:RefSeq:YP_005229748.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="single-stranded DNA-binding protein"
/protein_id="WP_020842505.1"
/db_xref="GeneID:66758892"
/translation="MTVRGINKVIIVGNLGQDPEVRYMPNGGAVANLSLATSESWRDK
QTGEMRENTEWHRVVLFGKLAEVASEYLRKGAQVYVEGQLRTRNWQDDSGVTRYVTEI
VVGQNGTMQMLGGRRDGGQPQNTAPQQPAQPQSPAAPAQPAGSPEKSPKKGGRKGRQS
AAPSQQVPQPLPDDYPPMDDDAPF"
gene 44695..>44839
/locus_tag="A464_RS26080"
/pseudo
/db_xref="GeneID:71766026"
CDS 44695..>44839
/locus_tag="A464_RS26080"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001310283.1"
/note="frameshifted; incomplete; partial in the middle of
a contig; missing C-terminus; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/db_xref="GeneID:71766026"
gene complement(45045..45362)
/locus_tag="A464_RS22780"
/old_locus_tag="A464_plas0065"
/db_xref="GeneID:66758893"
CDS complement(45045..45362)
/locus_tag="A464_RS22780"
/old_locus_tag="A464_plas0065"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_004118473.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_020842508.1"
/db_xref="GeneID:66758893"
/translation="MRMSLMFAAVTLLTGINLLFIPFQPVPALWGAGLAVSFILINVV
ADKLRLWSGVAWIIVVDIIITLMLKGKEPGDELRVLLTVFAFLASAWYSVVQYRKEKH
FRS"
gene complement(45397..45651)
/locus_tag="A464_RS22785"
/old_locus_tag="A464_plas0066"
/db_xref="GeneID:66758894"
CDS complement(45397..45651)
/locus_tag="A464_RS22785"
/old_locus_tag="A464_plas0066"
/inference="COORDINATES: similar to AA
sequence:RefSeq:YP_005229756.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunit theta"
/protein_id="WP_024143509.1"
/db_xref="GeneID:66758894"
/translation="MSKWNIASFSKEDQDKVSVDKAAAAVAWQERMNKPVVPELAERE
QPEHLRQYFRERPEVHRQNSQQLPRENAPEYNKPGDEQQK"
gene complement(45830..45988)
/locus_tag="A464_RS25575"
/db_xref="GeneID:66759122"
CDS complement(45830..45988)
/locus_tag="A464_RS25575"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001027499.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_042917487.1"
/db_xref="GeneID:66759122"
/translation="MHHKALINARRRDAGQREVTTAQVMDEICEYMTCQYAVYIGGHF
ILQGGKGQ"
gene complement(46038..46544)
/locus_tag="A464_RS22795"
/old_locus_tag="A464_plas0070"
/pseudo
/db_xref="GeneID:66758895"
CDS complement(46038..46544)
/locus_tag="A464_RS22795"
/old_locus_tag="A464_plas0070"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_000108571.1"
/note="internal stop; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="antirestriction protein ArdA"
/db_xref="GeneID:66758895"
gene complement(46981..47409)
/locus_tag="A464_RS22800"
/old_locus_tag="A464_plas0072"
/db_xref="GeneID:66758896"
CDS complement(46981..47409)
/locus_tag="A464_RS22800"
/old_locus_tag="A464_plas0072"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001198918.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="antirestriction protein"
/protein_id="WP_020842515.1"
/db_xref="GeneID:66758896"
/translation="MQLAIRQHTLNVEESNRQSFLPYMFGNDFMLAELQVYALAKKWM
PEYNGGFWHFIRLPEGGGYMMPDCDRVHMINGENWFDRTVSADAAGIILTSLAINRRC
WTHHDCGNAALTRLYMLRDTQLWNHITFHPECNAIYAALD"
gene complement(<47595..47894)
/locus_tag="A464_RS24880"
/pseudo
/db_xref="GeneID:66759027"
CDS complement(<47595..47894)
/locus_tag="A464_RS24880"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008322848.1"
/note="incomplete; partial in the middle of a contig;
missing C-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/db_xref="GeneID:66759027"
gene complement(47962..48358)
/locus_tag="A464_RS22810"
/old_locus_tag="A464_plas0074"
/pseudo
/db_xref="GeneID:66758897"
CDS complement(47962..48358)
/locus_tag="A464_RS22810"
/old_locus_tag="A464_plas0074"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008322847.1"
/note="frameshifted; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="DUF1380 family protein"
/db_xref="GeneID:66758897"
gene complement(48412..48831)
/locus_tag="A464_RS22815"
/old_locus_tag="A464_plas0075"
/db_xref="GeneID:66758898"
CDS complement(48412..48831)
/locus_tag="A464_RS22815"
/old_locus_tag="A464_plas0075"
/inference="COORDINATES: similar to AA
sequence:RefSeq:YP_005229762.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF1380 family protein"
/protein_id="WP_020842518.1"
/db_xref="GeneID:66758898"
/translation="MYGTCETLCRLLSEQYPAETPLNLIVWSPADIEALADGMEYAVS
EQDIKDVLARLDAIPEEERLESGVSACAVMELIDQVKQAVPAVSVPADLLETLLMTAE
QALWHREWTARDGNHPVPESVTRRLAATAKVRALLKN"
gene complement(48842..49063)
/locus_tag="A464_RS22820"
/old_locus_tag="A464_plas0076"
/db_xref="GeneID:66758899"
CDS complement(48842..49063)
/locus_tag="A464_RS22820"
/old_locus_tag="A464_plas0076"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_958723.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_020842519.1"
/db_xref="GeneID:66758899"
/translation="MNYAGHEKLRADVAELANSMSDLRDALNDMEHRYRFDSDVLTER
LARQTLFRINALFMAAYNEMLELDTCFKD"
gene complement(49063..49743)
/locus_tag="A464_RS22825"
/old_locus_tag="A464_plas0077"
/db_xref="GeneID:66758900"
CDS complement(49063..49743)
/locus_tag="A464_RS22825"
/old_locus_tag="A464_plas0077"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_490548.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DNA methylase"
/protein_id="WP_020842520.1"
/db_xref="GeneID:66758900"
/translation="MFRFILGNCVDIMSGFPERAVDFILTDPPYLVGFRDRSGRSIAG
DKTDEWLQPACNEMYRVLKKDALMVNFYGWNRVDRFMAAWKSAGFSVVGHLVFTKTYS
SKSAYVGYQHECAYILAKGRPALPQDPLPDVLGWKYSGNRHHPTEKPVTSLQPLIESF
THPNAIVLDPFAGSGSTCVAAVQAGRRYIGIELMEQYHKAGITRLSAVQRAMQRPAAN
DVFYPEAA"
gene complement(50120..50455)
/locus_tag="A464_RS22830"
/old_locus_tag="A464_plas0078"
/db_xref="GeneID:66758901"
CDS complement(50120..50455)
/locus_tag="A464_RS22830"
/old_locus_tag="A464_plas0078"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_004194745.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_020842521.1"
/db_xref="GeneID:66758901"
/translation="MNTWLVGLIADVDDTEMIVYYLVSATDLEHAEAGVLEMGGTWWP
SLQREDDQHRWEYAAGVVWFNSIILLYDVENSILRGVKFLDAWTVTGSTDTPVLRDEW
GNDWRDITR"
gene complement(50452..50919)
/locus_tag="A464_RS24885"
/old_locus_tag="A464_plas0079"
/db_xref="GeneID:66759028"
CDS complement(50452..50919)
/locus_tag="A464_RS24885"
/old_locus_tag="A464_plas0079"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_490546.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_020842522.1"
/db_xref="GeneID:66759028"
/translation="MFRVTCIDLENGEFALYINGHYLSSEDGSGEKLYLGDILERLSR
LPGVTTETVERPVPDSDEWNWNDVADSVFPMSVPLSRKMTVAAFKQRLSEYPDDTLCC
GTFWLAEDFLALDNSLEAAEIDAAIELAQHNHDANEGVNWSHLKWAINEVKRV"
gene 51450..51872
/gene="umuD"
/locus_tag="A464_RS22840"
/old_locus_tag="A464_plas0080"
/db_xref="GeneID:66758902"
CDS 51450..51872
/gene="umuD"
/locus_tag="A464_RS22840"
/old_locus_tag="A464_plas0080"
/EC_number="2.7.7.7"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_490545.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="translesion error-prone DNA polymerase V
autoproteolytic subunit"
/protein_id="WP_020842523.1"
/db_xref="GeneID:66758902"
/translation="MLLLVAPEQEPVQSTAPLFTERCPAGFPSPAADYTEEELDLNAY
CIRRPAATFFVRAIGDSMKEMGLHSGDLMVVDKAEKPMQGDIVITETDGEFTVKRLQL
KPRIALLPMTPAYPTLYPEELQIFGVVTAFIHKTRSTD"
gene 51872..52756
/gene="umuC"
/locus_tag="A464_RS22845"
/old_locus_tag="A464_plas0082"
/db_xref="GeneID:66758903"
CDS 51872..52756
/gene="umuC"
/locus_tag="A464_RS22845"
/old_locus_tag="A464_plas0082"
/EC_number="2.7.7.7"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_490544.1"
/GO_function="GO:0003684 - damaged DNA binding [Evidence
IEA]"
/GO_process="GO:0006281 - DNA repair [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="translesion error-prone DNA polymerase V subunit
UmuC"
/protein_id="WP_020842525.1"
/db_xref="GeneID:66758903"
/translation="MFALADVNSFYTSCEKVFRPDLRDRPVVVLSNNDGCVIARSAEA
KLLSLQPVEEIWGVGRRISKKPNTLGITTALQQARTNPTFIRKNFNVVLKRTVQELNG
ESCISLEDAPPPKQQIVCSRSFGERITTYEAMRQAVCQYAERAAEKLRGERQFCRHIA
VFVKTSPFAVTEPYHGNLASEKLLIPTQDTRDIIAAAVRALDRIWVDGHRYAKAGCML
NDFTPTGVSQLNLFDEVQPRERSEQLMQVLDGINHSGKGKIWFASRGIAPEWQMKMEL
LSPAYTTRWADIPAAKLT"
gene complement(52838..53812)
/locus_tag="A464_RS22850"
/old_locus_tag="A464_plas0083"
/db_xref="GeneID:66758904"
CDS complement(52838..53812)
/locus_tag="A464_RS22850"
/old_locus_tag="A464_plas0083"
/inference="COORDINATES: similar to AA
sequence:RefSeq:YP_005229774.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ParB family protein"
/protein_id="WP_020842526.1"
/db_xref="GeneID:66758904"
/translation="MSNERRKTIGRQLNTQASMVEMTDPQRSQVFTLKTGRKITFRFV
RVPASDVESKTFVNQETNGRDQLALTRESLKSIIQTIKFQQFFPCIGIQQGERIEILD
GSRRRASAIYIRTGLDVMVANELLSADEARHLAKDIQTAKEHNLREIGLRLMALKESG
FNQKEIAELEGLSQAKVTRALQAAAVPQELISLFPVQSELSFSDYKILLEVNEKLSEK
GLTSEGLIQSVSDQHDAILSDYERPDDEQKASILKLISQASQALIAPPPKEKSVISAL
WTFEEKDKFARKRVKGRTLTYEFSRMSKVVQDELDKAINEVLERNLSQ"
gene complement(53812..55017)
/locus_tag="A464_RS22855"
/old_locus_tag="A464_plas0084"
/db_xref="GeneID:66758905"
CDS complement(53812..55017)
/locus_tag="A464_RS22855"
/old_locus_tag="A464_plas0084"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_490542.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="AAA family ATPase"
/protein_id="WP_000427674.1"
/db_xref="GeneID:66758905"
/translation="MENIEQLRKVATRAGKLLTSLSESIRQQKEELKLTEFYQEYSKA
ALYKLPKLSKGSVEYAVAEMEASGYIFKKKPSGNTMKYAMTIQNVIDLYFHRKVPKYR
DRFDKAFTIFVCNLKGGGSKTVSTASLSHAFRAHPQLLFEDLRILAIDFDPQASLTMF
LSHENSVGLVENTAAQAMLQNVSREELLSDFIVPSIIPGVDVIPASIDDAFLAEGWKG
LCEEHLPGQNIHAVLKENIIDKLRYDYDFIFLDSGPHLDAFLKNCIGAADLMLTPLPP
ATVDFHSSLKFVASLPALIDSIEQDGHTCNLIGNVGFMSKILNKSDHKICHSQAKEVF
GADMLDMVLPRLDGFERCGETFDTVISANPATYDGSTEALKSAKSAAEDFAKAVFDRI
EFIRTNGGM"
gene 55444..56373
/locus_tag="A464_RS22860"
/old_locus_tag="A464_plas0085"
/db_xref="GeneID:66758906"
CDS 55444..56373
/locus_tag="A464_RS22860"
/old_locus_tag="A464_plas0085"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_490541.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="Rpn family recombination-promoting
nuclease/putative transposase"
/protein_id="WP_020842527.1"
/db_xref="GeneID:66758906"
/translation="MKKKNTTPTPHDATFRQFLTQPDIARDFMELHLPAELRAICDLS
TLKLESGSFVEDDLRQYFSDVLYSLKTTAGDGYIHVLVEHQSTPDKHMAFRLIRYAVA
AMQRHLEAGHKKLPLVIPVLFYTGKRSPYPYSTRWLDEFDDTALAGKLYSSAFPLVDV
TVIPDDEIAGHRSMAALTLLQKHIHQRDLAELVDRLAPILLAGYLSSSQVISLVHYIV
QAGETADAEAFVRELAQRVPQHGDALMTIAQQLEQKGIEKGIQLGRQEGRSEGEREAT
LKIARTMLQNGIDRNTVMKMTGLTEDDLAQIRH"
gene complement(56540..>56638)
/locus_tag="A464_RS26085"
/pseudo
/db_xref="GeneID:71766027"
CDS complement(56540..>56638)
/locus_tag="A464_RS26085"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_003119931.1"
/note="incomplete; partial in the middle of a contig;
missing N-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="recombinase family protein"
/db_xref="GeneID:71766027"
gene complement(56829..57230)
/locus_tag="A464_RS26090"
/old_locus_tag="A464_plas0087"
/db_xref="GeneID:71766028"
CDS complement(56829..57230)
/locus_tag="A464_RS26090"
/old_locus_tag="A464_plas0087"
/inference="COORDINATES: protein motif:HMM:NF036772.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="muramoyltetrapeptide carboxypeptidase"
/protein_id="WP_020842529.1"
/db_xref="GeneID:71766028"
/translation="MVASYNKEMHEIDNSKKLSMNNSLNEVFEALSHGVNYTGIEPMN
RQAAKTVSGKLDGGNLTLVQSLFSTVYKGSYSDKIMMLEDTGVTPKQLDRTLHQIEYS
RKFHPRGVIFGQFYGLNASDEEKALYRYVIK"
gene complement(57289..57756)
/locus_tag="A464_RS26095"
/old_locus_tag="A464_plas0088"
/db_xref="GeneID:71766029"
CDS complement(57289..57756)
/locus_tag="A464_RS26095"
/old_locus_tag="A464_plas0088"
/inference="COORDINATES: protein motif:HMM:NF014114.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="LD-carboxypeptidase"
/protein_id="WP_020842530.1"
/db_xref="GeneID:71766029"
/translation="MIQIKSTAFKETALLVLVLFLSGCAATLPPTIVKKTAPPAEAPE
RKVCSGQKGTVFLIASSSQYDEHVIPEIETAFSRQCYAVDKRYLDQKPTRLGYVNTDE
KRAKTLINALSDRNVHYLWFVRGGSGALNLYPCPACKPATYFSLNAENPHRLQ"
gene 58315..59256
/locus_tag="A464_RS22870"
/old_locus_tag="A464_plas0091"
/db_xref="GeneID:66758908"
CDS 58315..59256
/locus_tag="A464_RS22870"
/old_locus_tag="A464_plas0091"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_490541.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="Rpn family recombination-promoting
nuclease/putative transposase"
/protein_id="WP_020842533.1"
/db_xref="GeneID:66758908"
/translation="MKKKSSTPTPHDATFRQFLTQPDIARDFMELHLPAELRAVCDLS
TLKLESGSFVEDDLRQYFSDVLYSLKTTAGDGYVHVLIEHQSSPDKHMAFRLIRYAVA
AMQRHLEAGHKKLPLVIPVLFYTGKRSPYPYSTRWLDEFDDTALAGKLYSSAFPLVDV
TVIPDDEIAGHRSMAALTLLQKHIHQRDLAELVDRLAPILLAGYLSSSQVISLVHYIV
QAGETADAEAFVRELAQRVPQHGDALMTIAQQLEQKGIEKGIQQGIQQGIQLGEQRGI
EKGKLEVARTMLQNGIDRNTVMKMTGLTEDDLAQIRH"
gene complement(59407..60189)
/locus_tag="A464_RS22875"
/old_locus_tag="A464_plas0092"
/db_xref="GeneID:66758909"
CDS complement(59407..60189)
/locus_tag="A464_RS22875"
/old_locus_tag="A464_plas0092"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_490521.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0006310 - DNA recombination [Evidence
IEA]"
/GO_process="GO:0015074 - DNA integration [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="site-specific integrase"
/protein_id="WP_020842534.1"
/db_xref="GeneID:66758909"
/translation="MSQPSLPAVYTQAPPALLPVAIDYPVALALRQMAMQHDDYPKYL
LAPEVSALLHYVPDLHRRMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQ
RAEKAARTAGRLPSGSQPHRLVPLSDNQYVSELQMMVATLKIPLERRNRRTGRTEKAR
LWEITDRTVRTWIREAVEAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQALM
GHKSISSTEVYTKVFALDVAARHRVQFQMPGADAVAMLKGTA"
gene complement(<60227..>60376)
/locus_tag="A464_RS24895"
/pseudo
/db_xref="GeneID:66759029"
CDS complement(<60227..>60376)
/locus_tag="A464_RS24895"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_490520.1"
/note="incomplete; partial in the middle of a contig;
missing N-terminus and C-terminus; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/db_xref="GeneID:66759029"
gene complement(60434..60739)
/gene="ccdB"
/locus_tag="A464_RS22880"
/old_locus_tag="A464_plas0093"
/db_xref="GeneID:66758910"
CDS complement(60434..60739)
/gene="ccdB"
/locus_tag="A464_RS22880"
/old_locus_tag="A464_plas0093"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_490518.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type II toxin-antitoxin system toxin CcdB"
/protein_id="WP_020842535.1"
/db_xref="GeneID:66758910"
/translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMAVPLVSARLLSD
RVPRDLYPVMHIGDESYRLLTTDMASVPATVIGEEVADLSLRENDIKNAINLMFRGV"
gene complement(60741..60959)
/gene="ccdA"
/locus_tag="A464_RS22885"
/old_locus_tag="A464_plas0094"
/db_xref="GeneID:66758911"
CDS complement(60741..60959)
/gene="ccdA"
/locus_tag="A464_RS22885"
/old_locus_tag="A464_plas0094"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_490517.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type II toxin-antitoxin system antitoxin CcdA"
/protein_id="WP_000813642.1"
/db_xref="GeneID:66758911"
/translation="MKQRITVTVDSDSYQLLKAYDVNISGLVSTTMQNEARRLRAERW
QEENREGMAEVASFIEANGSFADENRNW"
gene 61630..61860
/gene="vapB"
/locus_tag="A464_RS22890"
/old_locus_tag="A464_plas0095"
/db_xref="GeneID:66758912"
CDS 61630..61860
/gene="vapB"
/locus_tag="A464_RS22890"
/old_locus_tag="A464_plas0095"
/inference="COORDINATES: similar to AA
sequence:RefSeq:YP_005229629.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type II toxin-antitoxin system VapB family
antitoxin"
/protein_id="WP_020842536.1"
/db_xref="GeneID:66758912"
/translation="MRTVSIFKNGNNRAIRLPRDLDFEGVSELEIIREGDCIILRPVR
PTWSSFAQLEKTDPDFMAEREEVVSDEGRFEI"
gene 61857..62285
/locus_tag="A464_RS22895"
/old_locus_tag="A464_plas0097"
/db_xref="GeneID:66758913"
CDS 61857..62285
/locus_tag="A464_RS22895"
/old_locus_tag="A464_plas0097"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_000815114.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type II toxin-antitoxin system VapC family
toxin"
/protein_id="WP_042917490.1"
/db_xref="GeneID:66758913"
/translation="MKQPRTKTYMLDTCICSFIMREQPDAVLKRLEQAVLRGHRIVIS
AITYSEIRFGATGPKASPRHVQLVEDFCARLDAILPWNRAAIDATTEIKVALRLTGTP
LGPNDTAIAGHAISAGAVLVTNNVREFARVPGLEPEDWVK"
gene complement(62512..62757)
/locus_tag="A464_RS25360"
/db_xref="GeneID:66759081"
CDS complement(62512..62757)
/locus_tag="A464_RS25360"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_138993537.1"
/db_xref="GeneID:66759081"
/translation="MSRQIFFTYTHQGDDFVLLSQQVQMMNNGDTTIANSEFNSHFPA
FFSQEEKQLAMAIRLDRSGNFVMYFANVPVFYCQPKT"
gene complement(63002..63781)
/locus_tag="A464_RS22905"
/old_locus_tag="A464_plas0100"
/db_xref="GeneID:66758914"
CDS complement(63002..63781)
/locus_tag="A464_RS22905"
/old_locus_tag="A464_plas0100"
/inference="COORDINATES: protein motif:HMM:NF012698.2"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0000160 - phosphorelay signal transduction
system [Evidence IEA]"
/GO_process="GO:0006355 - regulation of DNA-templated
transcription [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="winged helix-turn-helix domain-containing
protein"
/protein_id="WP_020842541.1"
/db_xref="GeneID:66758914"
/translation="MDVDTQDSFAEMERLIASKIIISDTVVFIPASRELRNDVTGELV
TLYTPANYCLLHLLASRPQILTKAELIKLSWNDKSQIISDNTFNQMVFHLRQSLAKVG
ADGIIITVPRRGLKINPCVSVKISGTGIQESTQTTSNIINFITGITGGISLSRRRNIF
LVILSGFLLFLSGFLYTSEPDKTAFNDYLLQEYKMCTVSYNGKIRKENISAFLTKSKT
DCSRKRYIILTQSDNHSRLSVISCPVATGNTKSCALSLYVQ"
gene 64083..66677
/locus_tag="A464_RS22910"
/old_locus_tag="A464_plas0101"
/db_xref="GeneID:66758915"
CDS 64083..66677
/locus_tag="A464_RS22910"
/old_locus_tag="A464_plas0101"
/inference="COORDINATES: protein motif:HMM:TIGR01414.1"
/GO_component="GO:0009279 - cell outer membrane [Evidence
IEA]"
/GO_function="GO:0015474 - autotransporter activity
[Evidence IEA]"
/GO_process="GO:0046819 - protein secretion by the type V
secretion system [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="autotransporter outer membrane beta-barrel
domain-containing protein"
/protein_id="WP_020842542.1"
/db_xref="GeneID:66758915"
/translation="MNKAFNIVWSHVRQAWIVTSELTTRNGTPFRATAGILPVILFSA
MVSFPAQAEYTEEVTSGITVTGENVPEYGYQVVDGGTTINTTLNNGRQIVVGTGSQAI
GTVINYENYFDAPINNGCSRPNCVPGQEVSDGGVATDTIVNTGMQQIIAGGRADNTVV
NNEGTQSVKNGGYASGTIINDNGLQWVGMGGSVSNAIINGGTQEVYMASKATNTTVNA
GGKQEIKTGSTAQDTILNGGQQIITDEGSVANGTIIYNGGQSIVQNSATANKTTINTG
GEQIISSDSTASETVINGGKQIINTGGNAYNTAVNSGGNQTVQNGAYSHDVKVNRGGI
LELNGGTAEDVTIDSGGIVSAHENSAMQGTLTNGGQAIIHDSVAINGDVLNRGTLSFT
SSQPVSAALINGNLSNSGTLFIGDASSRAAGSVLTVQGDYHGDGGSLLLNTVLGTDNS
ATDKFVIGGNVTGTTDVSVNNLGGKGDQTLNGIEIVKVAGSSAAGAFYNSKAIRAGLY
NYTVIQKGNNYYLTSDYVAPEPEPTPEPTPAPGKDISTSAGGYIANLAAANQVFITRL
ADRQTSMEYLNTPTDNAEGTSLWLRQVGGHTRSHADVLRTRSNRYVAQIGGEILAGTL
GNADRWAMGLMAGYADQNSTTTSVRSRYNTRTTSSLRGYSVGLYGTWMEDAKDNSGLY
LDAWVQYSWFHNSVNEAGQASDSYSSKGFSASAEGGYAYKLSEGKRTDFYIQPQMQLV
WSGISADGHHTRTGIYVQDEGNANIQSRIGIKAYLKGHSRTDDKTGREFKPFVEANWI
HNTARYGVRMSGDQLTQDGAKNISELKTGIEANLASSISLWGGIGVQIGEKGYSDTQG
QLGIRYRF"
gene 66842..67378
/locus_tag="A464_RS22915"
/old_locus_tag="A464_plas0102"
/db_xref="GeneID:66758916"
CDS 66842..67378
/locus_tag="A464_RS22915"
/old_locus_tag="A464_plas0102"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="Vi polysaccharide biosynthesis protein tviA"
/protein_id="WP_020842543.1"
/db_xref="GeneID:66758916"
/translation="MDLGNVSFAEPKCWPENDIYFQAGVSFLQERLNADGNRREYSFL
HLNGYTFRHFLSDFPPDKDGSIVIISSPRFLPLAHFWMANHHNVIAVFDSKTNIETLV
KMLKKRPSKKRYNTVNKHAPKITDRDITILRHYLNTGNMDYIQRRYSRSYSTVQQWKK
IIASKLNIRKLEYLTLQN"
gene complement(67436..>67725)
/locus_tag="A464_RS24505"
/pseudo
/db_xref="GeneID:66758999"
CDS complement(67436..>67725)
/locus_tag="A464_RS24505"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_415949.3"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="frameshifted; incomplete; partial in the middle of
a contig; missing N-terminus; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="transposase"
/db_xref="GeneID:66758999"
gene complement(<67822..>68097)
/locus_tag="A464_RS25370"
/old_locus_tag="A464_plas0107"
/pseudo
/db_xref="GeneID:66759082"
CDS complement(<67822..>68097)
/locus_tag="A464_RS25370"
/old_locus_tag="A464_plas0107"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_076611553.1"
/note="frameshifted; incomplete; partial in the middle of
a contig; missing N-terminus and C-terminus; Derived by
automated computational analysis using gene prediction
method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS3 family transposase"
/db_xref="GeneID:66759082"
gene <68093..68293
/locus_tag="A464_RS24515"
/old_locus_tag="A464_plas0106"
/pseudo
/db_xref="GeneID:66759000"
CDS <68093..68293
/locus_tag="A464_RS24515"
/old_locus_tag="A464_plas0106"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001539782.1"
/note="incomplete; partial in the middle of a contig;
missing N-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="zinc ribbon domain-containing protein"
/db_xref="GeneID:66759000"
gene complement(68640..69170)
/locus_tag="A464_RS22925"
/old_locus_tag="A464_plas0109"
/db_xref="GeneID:66758917"
CDS complement(68640..69170)
/locus_tag="A464_RS22925"
/old_locus_tag="A464_plas0109"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_000348879.1"
/GO_function="GO:0008080 - N-acetyltransferase activity
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="GNAT family N-acetyltransferase"
/protein_id="WP_020842550.1"
/db_xref="GeneID:66758917"
/translation="MDSLRIEIFSEEVEYELSNFDCGEEHLNTFLTNHLKRQHKSKIL
RGYVLVTREDKPRVMGFYTLSGSCFERILLLSKTQQKRVPYKNVPSVTLGRLAIDKSI
HHQGYGETLVIHAMKVVYQASQAVGIHGMFVEALNDNAQKFYLRLGFIQLKEENCNSL
FYPTKSIEELFEVEDK"
gene complement(69174..69443)
/locus_tag="A464_RS22930"
/old_locus_tag="A464_plas0110"
/db_xref="GeneID:66758918"
CDS complement(69174..69443)
/locus_tag="A464_RS22930"
/old_locus_tag="A464_plas0110"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001585051.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF1778 domain-containing protein"
/protein_id="WP_020842551.1"
/db_xref="GeneID:66758918"
/translation="MSTLKKQRIDLRLNEYDKHMIEEAAAMTNQSISQFMVSTASERA
AEVIDQHRRLLLNEESWNLVMEAITNPPAPNDRLKRAAKRLQELK"
gene 70293..71282
/locus_tag="A464_RS22940"
/old_locus_tag="A464_plas0111"
/db_xref="GeneID:66758919"
CDS 70293..71282
/locus_tag="A464_RS22940"
/old_locus_tag="A464_plas0111"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_490513.1"
/GO_function="GO:0003887 - DNA-directed DNA polymerase
activity [Evidence IEA]"
/GO_process="GO:0006270 - DNA replication initiation
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="RepB family plasmid replication initiator
protein"
/protein_id="WP_077909641.1"
/db_xref="GeneID:66758919"
/translation="MFEEVDKSSGEVVNLTPNASNTVQPVALMRLGVFVPTLKSLKNS
KKNILSRTDATEELTRLSLARAEGFDKVEITGPRLDMDNDFKTWVGVIHSFARHKVIG
DKVELPFVEFAKLCGIPSSQSSRKLRERISPSLKRIAGTVISFSRTTEKHTKEYITHL
VQSAYYDTEKDVVQLQADPRLFELYQFDRKVLLQLKAINALKRRESAQALYTFIESLP
RDPAPISLARLRARLNLKSPVFSQNQTVRRAMEQLREIGYLDYTEIQRGRTKLFCIHY
RRPKLKPPHDESAENPQLPAAPGDVSPEMAEKLKLLEKLGITLDDLETLFKSR"
gene complement(71529..72314)
/locus_tag="A464_RS22945"
/old_locus_tag="A464_plas0113"
/db_xref="GeneID:66758920"
CDS complement(71529..72314)
/locus_tag="A464_RS22945"
/old_locus_tag="A464_plas0113"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_052628.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0006310 - DNA recombination [Evidence
IEA]"
/GO_process="GO:0015074 - DNA integration [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="site-specific integrase"
/protein_id="WP_049823145.1"
/db_xref="GeneID:66758920"
/translation="MGDEQHPFPLQNSPERVSLLLIAPGVDFATAVALRRMATSTGAT
PAYLLAPEVSALLWYIPDQRHHILFATMWNTGIRIGEARTLTPESFDLDGLRPFVRVL
SEKVRARRGRPPKDEVHLVPLTDISYVRQMESWMVTTRPGRREPLWAVTDETMRNWLK
QAVKRAEADGVHFSIPVTPHTFWRSYIMHMLYHRQPRKVIQALAGHKDPRSMEVYTRV
FALDMAATLAVPFTGDGHDAAQILRTLPLLRDNVIHHSLYKLW"
gene complement(72428..72583)
/locus_tag="A464_RS25380"
/db_xref="GeneID:66759083"
CDS complement(72428..72583)
/locus_tag="A464_RS25380"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001312821.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="WP_085928868.1"
/db_xref="GeneID:66759083"
/translation="MLPPLLVRFCLSWHYPNSPKNSKTDLSPRHDWLQIGSVLKKDPL
RIWFYPQ"
gene complement(72662..72958)
/locus_tag="A464_RS22950"
/old_locus_tag="A464_plas0114"
/db_xref="GeneID:66758921"
CDS complement(72662..72958)
/locus_tag="A464_RS22950"
/old_locus_tag="A464_plas0114"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001532579.1"
/GO_function="GO:0008657 - DNA topoisomerase type II
(double strand cut, ATP-hydrolyzing) inhibitor activity
[Evidence IEA]"
/GO_function="GO:0042803 - protein homodimerization
activity [Evidence IEA]"
/GO_process="GO:0030541 - plasmid partitioning [Evidence
IEA]"
/GO_process="GO:0051290 - protein heterotetramerization
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type II toxin-antitoxin system RelE/ParE family
toxin"
/protein_id="WP_020842555.1"
/db_xref="GeneID:66758921"
/translation="MKTVKLTPKASQDLEGIWYYGDHHFGEGQADRYINQISCIFQVM
SDHNIGTPRPELGEYIFALPVERHMLYFLQSDIEIIIIRILSQHQDAGRHLNWL"
gene complement(72945..73211)
/locus_tag="A464_RS22955"
/old_locus_tag="A464_plas0115"
/db_xref="GeneID:66758922"
CDS complement(72945..73211)
/locus_tag="A464_RS22955"
/old_locus_tag="A464_plas0115"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001307279.1"
/GO_process="GO:0051983 - regulation of chromosome
segregation [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type II toxin-antitoxin system ParD family
antitoxin"
/protein_id="WP_020842556.1"
/db_xref="GeneID:66758922"
/translation="MARTMTVDLGVELREFIESLIESGDYRTQSEVIRESLRLLREKQ
AESRLQALRDLLAEGLSSGEPVAWEKDAFLKKVKAGTRSAGENR"
gene <73370..>73713
/locus_tag="A464_RS22960"
/pseudo
/db_xref="GeneID:66758923"
CDS <73370..>73713
/locus_tag="A464_RS22960"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_015065592.1"
/note="frameshifted; internal stop; incomplete; partial in
the middle of a contig; missing N-terminus and C-terminus;
Derived by automated computational analysis using gene
prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS3 family transposase"
/db_xref="GeneID:66758923"
gene complement(74814..75458)
/locus_tag="A464_RS22965"
/old_locus_tag="A464_plas0119"
/db_xref="GeneID:66758924"
CDS complement(74814..75458)
/locus_tag="A464_RS22965"
/old_locus_tag="A464_plas0119"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_020842560.1"
/db_xref="GeneID:66758924"
/translation="MKNNLFVYGGCIYFRKGLSAFLDKEFQIIYFNDIIDLYTVLSVE
QPKHINVILVLNLSVLSEFVKFNTLLTLLKGDKRVKIGILINKLTSYLSYYFFMKLNG
KVHFFDAENAKTGGLCKDVKCWFRSGISSHIRPVYRFYDKKYKIPLMGWISLVIPLCG
ESINDIKNVLGVNKTLIYQARYVALSKLKMRSYKQFCHLFFQGSLKIEILPPYF"
gene complement(75495..76091)
/locus_tag="A464_RS22970"
/old_locus_tag="A464_plas0120"
/db_xref="GeneID:66758925"
CDS complement(75495..76091)
/locus_tag="A464_RS22970"
/old_locus_tag="A464_plas0120"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_020842561.1"
/db_xref="GeneID:66758925"
/translation="MKLLHMKSLFIISSNTFLCEGLKHALLDKKKPIQIIEWNSEKTI
AEIITNYSGAYFLFDMEIYNSHSWTYLASLLKIKNHIYITPRFSIITNDEINTVRRSI
ILSILPIEQIFDFTLPVKTLIQYISEWLEEKQSPGPLKKQVLREHELLTVYKTLSGKK
INEQAEEEGHPVKTIYSRRKSALNKLGCKNIRELIESV"
gene complement(76856..77302)
/locus_tag="A464_RS22975"
/old_locus_tag="A464_plas0122"
/db_xref="GeneID:66758926"
CDS complement(76856..77302)
/locus_tag="A464_RS22975"
/old_locus_tag="A464_plas0122"
/inference="COORDINATES: protein motif:HMM:NF013152.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="lysozyme"
/protein_id="WP_020842563.1"
/db_xref="GeneID:66758926"
/translation="MLISNHGKNLIREFEGLKLNAYQDSGGIWTIGYGYTGMINGKKI
DTDTVFTKEMAEFYLNTEVEKISKLITNLLKVKLNQYQFDAIGSLVYNIGLGNFSKSR
LLRYINNSEFSFAADEFIRWNKCKGRILHGLTFRRMKEKELFIRKE"
gene complement(77305..77619)
/locus_tag="A464_RS22980"
/old_locus_tag="A464_plas0123"
/db_xref="GeneID:66758927"
CDS complement(77305..77619)
/locus_tag="A464_RS22980"
/old_locus_tag="A464_plas0123"
/inference="COORDINATES: protein motif:HMM:NF027409.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="phage holin family protein"
/protein_id="WP_020842564.1"
/db_xref="GeneID:66758927"
/translation="MGTQTTEFIMFLPYDFLINIILLGGWGGIVNILLKRDGQRKTLQ
KMLRQITVSGFVSILISLIFIKEGFQKESILIGAGVGGVSGRKILEIIIDKISGILVG
GK"
gene 77739..78089
/locus_tag="A464_RS22985"
/old_locus_tag="A464_plas0124"
/db_xref="GeneID:66758928"
CDS 77739..78089
/locus_tag="A464_RS22985"
/old_locus_tag="A464_plas0124"
/inference="COORDINATES: protein motif:HMM:NF012698.2"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0000160 - phosphorelay signal transduction
system [Evidence IEA]"
/GO_process="GO:0006355 - regulation of DNA-templated
transcription [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="winged helix-turn-helix domain-containing
protein"
/protein_id="WP_020842565.1"
/db_xref="GeneID:66758928"
/translation="MIFFNKNSGILMRDKHIVYLTQKESELMSALILSKARRSFLSRQ
ELVQFVWSDKEQCIDNGNIVQLVFLLRKKLSQITNQTMILNLFKRGYYLNGDEPVSFT
LYPLCFLKHVDFSK"
gene 78992..>79855
/locus_tag="A464_RS22990"
/old_locus_tag="A464_plas0125"
/pseudo
/db_xref="GeneID:66758929"
CDS 78992..>79855
/locus_tag="A464_RS22990"
/old_locus_tag="A464_plas0125"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001293470.1"
/note="incomplete; partial in the middle of a contig;
missing C-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="replication protein RepA"
/db_xref="GeneID:66758929"
gene complement(80143..80884)
/locus_tag="A464_RS22995"
/old_locus_tag="A464_plas0127"
/pseudo
/db_xref="GeneID:66758930"
CDS complement(80143..80884)
/locus_tag="A464_RS22995"
/old_locus_tag="A464_plas0127"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_076612087.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="frameshifted; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS3 family transposase"
/db_xref="GeneID:66758930"
gene 81323..85135
/locus_tag="A464_RS23000"
/old_locus_tag="A464_plas0128"
/db_xref="GeneID:66758931"
CDS 81323..85135
/locus_tag="A464_RS23000"
/old_locus_tag="A464_plas0128"
/inference="COORDINATES: protein motif:HMM:NF023351.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="inverse autotransporter beta-barrel
domain-containing protein"
/protein_id="WP_042917493.1"
/db_xref="GeneID:66758931"
/translation="MKIITGFIFTCFRQNVGFLFLNQGFIAVEMKKTLLVFGQLFSQR
SIFCGVLLTLASMDVVDAAGSIASPVESAKGHLAEMSTQVYTLKPGENTDVIAKRHGI
TSSELKALNRFRFFAHGFEHLHAGDELEIPVTPFKLNDKTLLGKEAVAISEDERKWST
TASKLGAFSHSKDKEHHAVMMAKGIAENKVSQVIHEWTRKLGNVQFQLDIDDKFSLKN
SQFDLLHPYYETREDLLFSQDSIHRTSERTQMNVGFGWRHFTDYSMFGSNLFLDYDLS
RDHTRAGVGSEYWLNYLKLGVNAYIGLTGWKNSPDVEDYDERPANGWDLRVDGWLPEY
PQLGSKFVYEQYYGREVGLFGRNQRQKNPHAFTVGMNWTPFPLLTLSAEQRQGKSGEN
DTRLGVNVRWQFGVPLSQQLNDDTVRHLRSVTGSRYDFIERNNDIVLEYRKQEVITLS
LPEQVRGQPGQLVRIAAGIKSKYVVKDVIWDESALSARGGKLTGQGAEWLLMMPEWTE
GASGIQISAVAHDVKGNESKRAVVNIVVDKPEVIVSPKLSILSTNPSTLSADGVSTSR
LTLELKDMAGQPVTGKTVTTAALTGAGAPGSRVSDWVEQNNGIYTATFTAGTYSGPAG
ISPLVDGNPVISAPVNVMLSPSISPDKTTFRADPLALDADGVSTSRLTLELKDMAGQP
VTGKTVTTAALTGAGAPGSRVSDWVEQNNGIYTATFTAGTYSGPAGISPLVDGNPVIS
APVNVMLSPSISPDKTTFRADPLALDADGVSTSRLTLELKDMAGQPVTGKTVTTAALT
GAGAPGSRVSDWVEQNNGIYTATFTAGTYSGPAGISPLVDGNPVISAPVNVMLSPSIS
PDKTTFRADPLALDADGVSTSRLTLELKDMAGQPVTGKTVTTAALTGAGAPGSRVSDW
VEQNNGIYTATFTAGTYSGPAGISPLVDGNPVISAPVNVMLSPSISPDKTTFRADPLA
LDADGVSTSRLTLELKDMAGQPVTGKTVTTAALTGAGAPGSRVSDWVEQNNGIYTATF
TAGTTVGEARVSTNISGVQYSPEITIALIHRPMGTFKLTLGGLSSSVLLKNEVEELTW
LGSGMKGFYFDVAFTPEGLNAGTKYTLSSDVSWLKINSAGRATFGDKPIGSMQFTIIA
TPSKIDDRHKTVKIKFKLKRWFYAEKGTTGVVGDYEQYCQDTFSLKPAGFGDLLSNHQ
YPDRVQEDDIYVKWGDISKYGYPVEHRYLTNSYQGMNAWRAVNLSNGQYLNVNANMHE
YFICMEKY"
gene 85138..86766
/locus_tag="A464_RS23005"
/old_locus_tag="A464_plas0129"
/db_xref="GeneID:66758932"
CDS 85138..86766
/locus_tag="A464_RS23005"
/old_locus_tag="A464_plas0129"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_020842570.1"
/db_xref="GeneID:66758932"
/translation="MFNNVKIPQKPAAASATIFPADGSMFVARQRMKVTVVYTPAASI
PADSILHMTLTSSGSISVSRSTPVITDDRSSATCEFDLYNQKSDLPAGELLFSVKCYS
TAKDAPTIPVEEVNSTIKYTLTSPPLDHIENMLPLVVKPYEVLDKNPAADGTTPDVKN
LGVVIKLTGLKTDGSLMDEHGIYCLSFDDYDSANALRLFIYNPTDKTLGDEIFPVSSA
FQRYFRIPLGTDGSAYVKIFQRANSIKNVLRVRPYVTTLYGTSYSNEEAILVNNIDIL
PENLGAPLVEELEGFTVTTEELKTGIHLKLNNWDDRSDDGYVIPFIKDKDNNVILSQN
YKTTIDVVNHFKIMIPYTYFTSNNIYTLGCIVSDEMQSSVTSCIVFKFIDNGGGILPP
DIERDLPAPSVRWTLADGRTYTVGKNEQEPTIFKKMLTDGELEMTFDISGIDVAVGDP
LVLTGVINGFDDKLLPKTFKINQGGFFLKAEDIANKRVSIALDKTLFKDFDSDQYGNP
GTVWIAGTFTNTILAQSHNSNVWYADIDTVAPGE"
gene 86940..87101
/locus_tag="A464_RS25580"
/old_locus_tag="A464_plas0130"
/db_xref="GeneID:66759123"
CDS 86940..87101
/locus_tag="A464_RS25580"
/old_locus_tag="A464_plas0130"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_020842571.1"
/db_xref="GeneID:66759123"
/translation="MSTTAIFDVGMPLIFTYTLTGIIGLLDKIVLHFVEGTVSLNKNN
DSVGAEPSG"
gene 87206..88669
/locus_tag="A464_RS23010"
/old_locus_tag="A464_plas0131"
/db_xref="GeneID:66758933"
CDS 87206..88669
/locus_tag="A464_RS23010"
/old_locus_tag="A464_plas0131"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_024143517.1"
/db_xref="GeneID:66758933"
/translation="MSKLSTRVDYINSSSAIILDRDYPIMNKILKSPIIPQAINGTLD
KDTLSQDIIVKIPSWDDKSIGDVIHVFWGTLHEIYVVQSVNDSVIMVSFSRNAISVGN
YSVYYTITDTVGNTGTSTTVSIMVTGGGSGSLATLPAPHIPQATDGVIDLSSQANDID
VKCYPDKAGQPGDILRVHFGKLLAEITLTYPVAMTPSVFLPRSSITHGNYVVYYEILR
AGNQVAISASVDVDAVLDIFLPAPVFPTAVNGVVNLKDEGLFVEMDIPRYDSAERGDE
IYSYIGITKGPVTIIEYPDNGSFPVKFKKESLEAGTFKAHYEVRKMDDYQIASPSISV
ILSDSITPPATTDDVWENIKAGIPFTIYNKVPAYTLSEEGRGSYYVLWQPKDVPLTIW
KPVVININLRTFKVISRDGYYWSMHTNYLHTAEGGGTLFSIERSDTNNSARRIVDTYG
KYLRKCENSNNDDHRITHSSNLAQGSNIFDFYFNFLS"
gene 88696..89640
/locus_tag="A464_RS25385"
/old_locus_tag="A464_plas0132"
/db_xref="GeneID:66759084"
CDS 88696..89640
/locus_tag="A464_RS25385"
/old_locus_tag="A464_plas0132"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_020842573.1"
/db_xref="GeneID:66759084"
/translation="MKIFSNISVITIVIIGLVGCKTDSSKITRLVQVAHPISRDSCTG
LGYGFKTACRLTADYNATLSECGKNGNAPAFVCSGILIRGTDSNLNRNYYSWNPSPKS
VKSGGVSFSYLRKDSPFQRFAYGYVSGFIFHPQEYTPHPLDSNIEVLCSFPKDGGTDG
RTDHGCGINLQNDARSLPCNKIGITTGQGWVNKYQNVVGINTCGFNVNEKSGLNTKQG
FNATIEAMGLLRKLGMGGNANELRLATWRQNKTDIPIEAFFYLKGYNNGLLSAQKDQK
EFYQQTGNKVPIISIVLPADYNAYQAQFLYQAWDQLIK"
CONTIG join(CP006609.1:1..89986)
//
