LOCUS NP_172171 367 aa linear PLN 20-OCT-2022
DEFINITION Peptidase S24/S26A/S26B/S26C family protein [Arabidopsis thaliana].
ACCESSION NP_172171
VERSION NP_172171.1
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
DBSOURCE REFSEQ: accession NM_100563.4
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (residues 1 to 367)
AUTHORS Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
Fraser,C.M., Venter,J.C. and Davis,R.W.
TITLE Sequence and analysis of chromosome 1 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 816-820 (2000)
PUBMED 11130712
REFERENCE 2 (residues 1 to 367)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 367)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (residues 1 to 367)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 5 (residues 1 to 367)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
The reference sequence is identical to AEE28047.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..367
/organism="Arabidopsis thaliana"
/db_xref="taxon:3702"
/chromosome="1"
/ecotype="Columbia"
Protein 1..367
/product="Peptidase S24/S26A/S26B/S26C family protein"
/calculated_mol_wt=40019
Region 187..344
/region_name="Peptidase_S26"
/note="Signal peptidase, peptidase S26; pfam10502"
/db_xref="CDD:431321"
CDS 1..367
/gene="Plsp2A"
/locus_tag="AT1G06870"
/gene_synonym="F4H5.6; F4H5_6; plastidic type I signal
peptidase 2A"
/coded_by="NM_100563.4:321..1424"
/inference="Similar to RNA sequence,
EST:INSD:DR348038.1,INSD:EL039552.1,INSD:AV441905.1,
INSD:DR348037.1,INSD:AV440249.1,INSD:DR348035.1,
INSD:DR372408.1,INSD:AU235625.1,INSD:AV534674.1,
INSD:BP586721.1,INSD:EL242728.1,INSD:AU226361.1,
INSD:DR348033.1,INSD:DR348036.1,INSD:AW004294.1,
INSD:AV439544.1,INSD:DR348034.1"
/inference="similar to RNA sequence,
mRNA:INSD:AK227693.1,INSD:AY085489.1,INSD:BX814610.1,
INSD:BX816660.1,INSD:BT024745.1,INSD:BX816869.1"
/note="Peptidase S24/S26A/S26B/S26C family protein;
FUNCTIONS IN: serine-type peptidase activity, peptidase
activity; INVOLVED IN: proteolysis; LOCATED IN: integral
to membrane, membrane; EXPRESSED IN: male gametophyte,
pollen tube; EXPRESSED DURING: L mature pollen stage;
CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C,
beta-ribbon domain (InterPro:IPR011056), Peptidase
S24/S26A/S26B/S26C (InterPro:IPR015927), Peptidase S26A,
signal peptidase I, conserved site (InterPro:IPR019758),
Peptidase S26, conserved region (InterPro:IPR019533),
Peptidase S26A, signal peptidase I (InterPro:IPR000223),
Peptidase S26A, signal peptidase I, serine active site
(InterPro:IPR019756); BEST Arabidopsis thaliana protein
match is: thylakoid processing peptide (TAIR:AT2G30440.1);
Has 9578 Blast hits to 9341 proteins in 2371 species:
Archae - 0; Bacteria - 7160; Metazoa - 214; Fungi - 105;
Plants - 244; Viruses - 0; Other Eukaryotes - 1855
(source: NCBI BLink)."
/db_xref="Araport:AT1G06870"
/db_xref="GeneID:837198"
/db_xref="TAIR:AT1G06870"
ORIGIN
1 mairvtftys syvarsiass agtrvgtgdv rscfetwvrp rfcghnqipd ivdkspgsnt
61 wgpssgprar passmystia reileegcks plvlgmislm nltgapqfsg mtglgispfk
121 tssvipflrg skwmpcsipa tlstdiaevd rggkvcdpkv klelsdkvsn ggngwvnkll
181 nicsedakaa ftavtvsllf rsalaepksi pstsmlptld vgdrviaekv syffrkpevs
241 divifkappi lvehgyscad vfikrivase gdwvevcdgk llvndtvqae dfvlepidye
301 mepmfvpegy vfvlgdnrnk sfdshnwgpl pikniigrsv frywppskvs diihheqvsq
361 kravdvs
//
