LOCUS NP_593524 208 aa linear PLN 14-JUL-2022
DEFINITION GTPase Ypt71 [Schizosaccharomyces pombe].
ACCESSION NP_593524
VERSION NP_593524.1
DBLINK BioProject: PRJNA127
BioSample: SAMEA3138176
DBSOURCE REFSEQ: accession NM_001018958.2
KEYWORDS RefSeq.
SOURCE Schizosaccharomyces pombe (fission yeast)
ORGANISM Schizosaccharomyces pombe
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
Schizosaccharomycetes; Schizosaccharomycetales;
Schizosaccharomycetaceae; Schizosaccharomyces.
REFERENCE 1 (residues 1 to 208)
AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R.,
Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D.,
Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T.,
Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P.,
Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D.,
Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S.,
Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M.,
Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S.,
Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S.,
Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S.,
Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M.,
Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G.,
Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J.,
Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I.,
Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C.,
Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D.,
Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H.,
Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H.,
Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S.,
Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z.,
Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C.,
Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L.,
Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A.,
Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L.,
Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V.,
Ussery,D., Barrell,B.G. and Nurse,P.
TITLE The genome sequence of Schizosaccharomyces pombe
JOURNAL Nature 415 (6874), 871-880 (2002)
PUBMED 11859360
REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to
Cerutti L]]
REFERENCE 2 (residues 1 to 208)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (13-JUL-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 208)
AUTHORS Wood,V.
CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome
sequencing project, Sanger Institute, The Wellcome Trust Genome
Campus, Hinxton, Cambridge CB10 1SA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to CAC21483.
FEATURES Location/Qualifiers
source 1..208
/organism="Schizosaccharomyces pombe"
/strain="972h-"
/db_xref="taxon:4896"
/chromosome="I"
Protein 1..208
/product="GTPase Ypt71"
/calculated_mol_wt=23343
Region 9..182
/region_name="Rab7"
/note="Rab GTPase family 7 (Rab7); cd01862"
/db_xref="CDD:206655"
Site 9..10
/site_type="other"
/note="Rab subfamily motif 1 (RabSF1)"
/db_xref="CDD:206655"
Site 15..22
/site_type="other"
/note="G1 box"
/db_xref="CDD:206655"
Site order(17..23,33,35,40,66,124..125,127,158..160)
/site_type="other"
/note="GTP/Mg2+ binding site [chemical binding]"
/db_xref="CDD:206655"
Site order(17,42,44..45,63,67,69..72,75..76,79)
/site_type="active"
/note="GDI interaction site [active]"
/db_xref="CDD:206655"
Site order(23..34,36..39)
/site_type="other"
/note="Rab subfamily motif 2 (RabSF2)"
/db_xref="CDD:206655"
Site order(33,38..46)
/site_type="other"
/note="Switch I region"
/db_xref="CDD:206655"
Site order(38,42..49,56,58)
/site_type="other"
/note="putative GEF interaction site [polypeptide
binding]"
/db_xref="CDD:206655"
Site 40
/site_type="other"
/note="G2 box"
/db_xref="CDD:206655"
Site order(41,43..45,60,62,69..70,73,77,79..82,176)
/site_type="active"
/note="putative effector interaction site [active]"
/db_xref="CDD:206655"
Site 41..45
/site_type="other"
/note="Rab family motif 1 (RabF1)"
/db_xref="CDD:206655"
Site 58..62
/site_type="other"
/note="Rab family motif 2 (RabF2)"
/db_xref="CDD:206655"
Site 63..66
/site_type="other"
/note="G3 box"
/db_xref="CDD:206655"
Site order(66,68..78)
/site_type="other"
/note="Switch II region"
/db_xref="CDD:206655"
Site 69..74
/site_type="other"
/note="Rab family motif 3 (RabF3)"
/db_xref="CDD:206655"
Site 77..81
/site_type="other"
/note="Rab family motif 4 (RabF4)"
/db_xref="CDD:206655"
Site 86..91
/site_type="other"
/note="Rab family motif 5 (RabF5)"
/db_xref="CDD:206655"
Site 116..121
/site_type="other"
/note="Rab subfamily motif 3 (RabSF3)"
/db_xref="CDD:206655"
Site 124..127
/site_type="other"
/note="G4 box"
/db_xref="CDD:206655"
Site 158..160
/site_type="other"
/note="G5 box"
/db_xref="CDD:206655"
Site 174..182
/site_type="other"
/note="Rab subfamily motif 4 (RabSF4)"
/db_xref="CDD:206655"
CDS 1..208
/gene="ypt71"
/locus_tag="SPAPB1A10.10c"
/coded_by="NM_001018958.2:61..687"
/db_xref="EnsemblGenomes-Gn:SPAPB1A10.10c"
/db_xref="EnsemblGenomes-Tr:SPAPB1A10.10c.1"
/db_xref="GeneID:2543411"
/db_xref="GOA:Q9HDY0"
/db_xref="InterPro:IPR001806"
/db_xref="InterPro:IPR003579"
/db_xref="InterPro:IPR005225"
/db_xref="InterPro:IPR027417"
/db_xref="PomBase:SPAPB1A10.10c"
/db_xref="PomBase:SPAPB1A10.10c.1"
ORIGIN
1 msaqkrvflk vvilgdsgvg ktclmnqfvn qkfsreykat igadfltkdv vvddklvtlq
61 lwdtagqerf qslgmafyrg adccvivynv nnsksfdsve nwrqeflyqt sqdecafpfi
121 ivgnqidkda skravslhra ldyckskhgs nmihfeasak entnvtdlfe tvsrlalene
181 ssrddfvndf seplllskpl nntsscnc
//
