GenomeNet

Database: RefSeq
Entry: XP_003097593
LinkDB: XP_003097593
Original site: XP_003097593 
LOCUS       XP_003097593             344 aa            linear   INV 16-FEB-2023
DEFINITION  hypothetical protein GCK72_017233 [Caenorhabditis remanei].
ACCESSION   XP_003097593
VERSION     XP_003097593.2
DBLINK      BioProject: PRJNA933661
            BioSample: SAMN13028143
DBSOURCE    REFSEQ: accession XM_003097545.2
KEYWORDS    RefSeq.
SOURCE      Caenorhabditis remanei
  ORGANISM  Caenorhabditis remanei
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (residues 1 to 344)
  AUTHORS   Teterina,A.A., Willis,J.H. and Phillips,P.C.
  TITLE     Chromosome-level assembly of the Caenorhabditis remanei genome
  JOURNAL   Unpublished
REFERENCE   2  (residues 1 to 344)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-FEB-2023) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 344)
  AUTHORS   Teterina,A.A., Willis,J.H. and Phillips,P.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-DEC-2019) Institute of Ecology and Evolution,
            University of Oregon, 5289 University of Oregon, Eugene, OR 97403,
            USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to KAF1750682.
            
            On Feb 16, 2023 this sequence version replaced XP_003097593.1.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Caenorhabditis remanei"
                     /strain="PX506"
                     /isolation_source="isopod"
                     /db_xref="taxon:31234"
                     /chromosome="V"
                     /sex="pooled males and females"
                     /tissue_type="whole organism"
                     /dev_stage="mixed stage"
                     /country="Canada: Toronto"
     Protein         1..344
                     /product="hypothetical protein"
                     /calculated_mol_wt=39177
     Region          8..31
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410626"
     Region          16..284
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:452889"
     Region          38..61
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410626"
     Region          117..136
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410626"
     Region          156..181
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410626"
     Region          207..234
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410626"
     CDS             1..344
                     /locus_tag="GCK72_017233"
                     /old_locus_tag="CRE_14827"
                     /coded_by="XM_003097545.2:1..1035"
                     /db_xref="GeneID:9826794"
ORIGIN      
        1 mqqhvleait avgmafgifg nvnvivaicr kkvlrtkgam fvmilaiahl vcnisevigl
       61 ilqfrframs kktcfeynil ykfavmfqsa lylsmamdic fsivlpikhm iwkkrnyvta
      121 mcifpavfat sttvvsflfi pdeeipycif mlttdmriyq mvssalialn tltviiivls
      181 vvcavrksen mrgsrhssss rtnslredks kvfrstfflv liyivswwsv vvifrimtev
      241 vsdlseaaqy mpyliiivmp nfcqayyvty frsprfrkaf reqfhwitcg hafpkifdke
      301 rsrgskhgsa tnsancpqah tdsdgkkirn gsqksirfsv qadv
//
DBGET integrated database retrieval system