GenomeNet

Database: RefSeq
Entry: XP_503850
LinkDB: XP_503850
Original site: XP_503850 
LOCUS       XP_503850                154 aa            linear   PLN 06-JUN-2017
DEFINITION  YALI0E12133p [Yarrowia lipolytica CLIB122].
ACCESSION   XP_503850
VERSION     XP_503850.1
DBLINK      BioProject: PRJNA12414
            BioSample: SAMEA3138171
DBSOURCE    REFSEQ: accession XM_503850.1
KEYWORDS    RefSeq.
SOURCE      Yarrowia lipolytica CLIB122
  ORGANISM  Yarrowia lipolytica CLIB122
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia.
REFERENCE   1  (residues 1 to 154)
  AUTHORS   Dujon,B., Sherman,D., Fischer,G., Durrens,P., Casaregola,S.,
            Lafontaine,I., De Montigny,J., Marck,C., Neuveglise,C., Talla,E.,
            Goffard,N., Frangeul,L., Aigle,M., Anthouard,V., Babour,A.,
            Barbe,V., Barnay,S., Blanchin,S., Beckerich,J.M., Beyne,E.,
            Bleykasten,C., Boisrame,A., Boyer,J., Cattolico,L.,
            Confanioleri,F., De Daruvar,A., Despons,L., Fabre,E., Fairhead,C.,
            Ferry-Dumazet,H., Groppi,A., Hantraye,F., Hennequin,C.,
            Jauniaux,N., Joyet,P., Kachouri,R., Kerrest,A., Koszul,R.,
            Lemaire,M., Lesur,I., Ma,L., Muller,H., Nicaud,J.M., Nikolski,M.,
            Oztas,S., Ozier-Kalogeropoulos,O., Pellenz,S., Potier,S.,
            Richard,G.F., Straub,M.L., Suleau,A., Swennen,D., Tekaia,F.,
            Wesolowski-Louvel,M., Westhof,E., Wirth,B., Zeniou-Meyer,M.,
            Zivanovic,I., Bolotin-Fukuhara,M., Thierry,A., Bouchier,C.,
            Caudron,B., Scarpelli,C., Gaillardin,C., Weissenbach,J., Wincker,P.
            and Souciet,J.L.
  TITLE     Genome evolution in yeasts
  JOURNAL   Nature 430 (6995), 35-44 (2004)
   PUBMED   15229592
REFERENCE   2  (residues 1 to 154)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2017) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 154)
  AUTHORS   Genoscope -,C.E.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-SEP-2008) Genoscope - Centre National de Sequencage :
            BP 191 91006 EVRY cedex - FRANCE (E-mail : seqref@genoscope.cns.fr
            - Web : www.genoscope.cns.fr)
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to CAG79443.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Yarrowia lipolytica CLIB122"
                     /strain="CLIB122"
                     /db_xref="taxon:284591"
                     /chromosome="E"
     Protein         1..154
                     /product="YALI0E12133p"
                     /calculated_mol_wt=15716
     Site            order(5,7,17,19,51..53,114..115)
                     /site_type="other"
                     /note="E-class dimer interface [polypeptide binding]"
                     /db_xref="CDD:238186"
     Region          14..150
                     /region_name="Sod_Cu"
                     /note="Copper/zinc superoxide dismutase (SODC); pfam00080"
                     /db_xref="CDD:425456"
     Site            order(30,89)
                     /site_type="other"
                     /note="P-class dimer interface [polypeptide binding]"
                     /db_xref="CDD:238186"
     Site            order(47,49,64,81,84,121)
                     /site_type="active"
                     /db_xref="CDD:238186"
     Site            order(47,49,64,121)
                     /site_type="other"
                     /note="Cu2+ binding site [ion binding]"
                     /db_xref="CDD:238186"
     Site            order(64,72,81,84)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:238186"
     CDS             1..154
                     /locus_tag="YALI0_E12133g"
                     /old_locus_tag="YALI0E12133g"
                     /coded_by="XM_503850.1:1..465"
                     /note="similar to uniprot|P00445 Saccharomyces cerevisiae
                     YJR104c SOD1 copper-zinc superoxide dismutase"
                     /db_xref="EnsemblGenomes-Gn:YALI0_E12133g"
                     /db_xref="EnsemblGenomes-Tr:CAG79443"
                     /db_xref="GeneID:2912814"
                     /db_xref="GOA:Q6C662"
                     /db_xref="InterPro:IPR001424"
                     /db_xref="InterPro:IPR018152"
ORIGIN      
        1 mvkavavlrg dskvsgtvtf eqdsesgpvt vtydikgndp naergfhvhe fgdntngcts
       61 agphfnpfkk nhggptdser hvgdlgnvkt dsegvakgvl kdsllkltgd nsivgrtvvi
      121 hggeddlgkg ghadslktgn agprpacgvi glta
//
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