GenomeNet

Database: RefSeq
Entry: YP_002344773
LinkDB: YP_002344773
Original site: YP_002344773 
LOCUS       YP_002344773             474 aa            linear   CON 18-JUL-2022
DEFINITION  catalase [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC
            700819].
ACCESSION   YP_002344773
VERSION     YP_002344773.1
DBLINK      BioProject: PRJNA57587
            Assembly: GCF_000009085.1
DBSOURCE    REFSEQ: accession NC_002163.1
KEYWORDS    RefSeq.
SOURCE      Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
  ORGANISM  Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1
  AUTHORS   Gundogdu,O., Bentley,S.D., Holden,M.T., Parkhill,J., Dorrell,N. and
            Wren,B.W.
  TITLE     Re-annotation and re-analysis of the Campylobacter jejuni NCTC11168
            genome sequence
  JOURNAL   BMC Genomics 8, 162 (2007)
   PUBMED   17565669
  REMARK    Publication Status: Online-Only
REFERENCE   2
  AUTHORS   Parkhill,J., Wren,B.W., Mungall,K., Ketley,J.M., Churcher,C.,
            Basham,D., Chillingworth,T., Davies,R.M., Feltwell,T., Holroyd,S.,
            Jagels,K., Karlyshev,A.V., Moule,S., Pallen,M.J., Penn,C.W.,
            Quail,M.A., Rajandream,M.A., Rutherford,K.M., van Vliet,A.H.,
            Whitehead,S. and Barrell,B.G.
  TITLE     The genome sequence of the food-borne pathogen Campylobacter jejuni
            reveals hypervariable sequences
  JOURNAL   Nature 403 (6770), 665-668 (2000)
   PUBMED   10688204
REFERENCE   3  (residues 1 to 474)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-DEC-2008) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   4  (residues 1 to 474)
  AUTHORS   Gundogdu,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-AUG-2006) Submitted on behalf of the Campylobacter
            sequencing team, Sanger Centre, Wellcome Trust Genome Campus,
            Hinxton, Cambridge CB10 1SA. In Collaboration with the Pathogen
            Molecular Biology Department at The London School of Hygiene &
            Tropical Medicine, London, Keppel Street, WC1E 7HT.
            E-mail:ozan.gundogdu@lshtm.ac.uk
REFERENCE   5  (residues 1 to 474)
  AUTHORS   Parkhill,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-FEB-2000) Submitted on behalf of the Campylobacter
            sequencing team, Sanger Centre, Wellcome Trust Genome Campus,
            Hinxton, Cambridge CB10 1SA E-mail: parkhill@sanger.ac.uk
  REMARK    revised by [4]
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to CAL35497.
            RefSeq Category: Reference Genome
                        FGS: First Genome sequenced
                        MOD: Model Organism
                        UPR: UniProt Genome
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Campylobacter jejuni subsp. jejuni NCTC 11168 =
                     ATCC 700819"
                     /strain="NCTC 11168"
                     /sub_species="jejuni"
                     /db_xref="taxon:192222"
     Protein         1..474
                     /product="catalase"
                     /EC_number="1.11.1.6"
                     /calculated_mol_wt=54192
     Region          45..472
                     /region_name="catalase_clade_3"
                     /note="Clade 3 of the heme-binding enzyme catalase;
                     cd08156"
                     /db_xref="CDD:163712"
     Site            order(45,50,97..98,117..118,133..137,139,142,148..153,157,
                     160,224,227,230..231,235,238..239,242,265..266,271,273,
                     299,301..302,304,307,314..315,323,325,328,331..333,
                     336..337,340..342,344..345,347..350,354,358..359,361,364,
                     366..368,378..383,443..444,446,448,452)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:163712"
     Site            order(52,90,124,129,137,330,334)
                     /site_type="other"
                     /note="heme binding pocket [chemical binding]"
                     /db_xref="CDD:163712"
     Site            order(127,170,174,177,179,189,211,213,278..281,418,
                     421..422)
                     /site_type="other"
                     /note="NADPH binding site [chemical binding]"
                     /db_xref="CDD:163712"
     CDS             1..474
                     /gene="katA"
                     /locus_tag="Cj1385"
                     /coded_by="NC_002163.1:1322526..1323950"
                     /experiment="DESCRIPTION:Gene expression, mutation
                     analysis[PMID:7670638]"
                     /inference="protein motif:Pfam:PF00199"
                     /inference="protein motif:Prosite:PS00437"
                     /transl_table=11
                     /db_xref="GOA:Q59296"
                     /db_xref="HSSP:P42321"
                     /db_xref="InterPro:IPR002226"
                     /db_xref="InterPro:IPR011614"
                     /db_xref="UniProtKB/Swiss-Prot:Q59296"
                     /db_xref="GeneID:905678"
CONTIG      join(WP_002856117.1:1..474)
ORIGIN      
        1 mkkltndfgn iiadnqnsls agakgpllmq dyllleklah qnreripert vhakgsgayg
       61 eikitadlsa ytkakifqkg evtplflrfs tvageagaad aerdvrgfai kfytkegnwd
      121 lvgnntptff irdaykfpdf ihtqkrdprt hlrsnnaawd fwslcpeslh qvtilmsdrg
      181 ipasyrhmhg fgshtysfin dknerfwvkf hfktqqgikn ltnqeaaeli akdreshqrd
      241 lynaienkdf pkwkvqvqil aekdieklgf npfdltkiwp hsfvplmdig emilnknpqn
      301 yfneveqaaf spsnivpgig fspdkmlqar ifsypdaqry rigtnyhllp vnraksevnt
      361 ynvagamnfd sykndaayye pnsydnspke dksylepdlv legvaqryap ldndfytqpr
      421 alfnlmnddq ktqlfhniaa smegvdekii tralkhfeki spdyakgikk alek
//
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