LOCUS YP_002344773 474 aa linear CON 18-JUL-2022
DEFINITION catalase [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC
700819].
ACCESSION YP_002344773
VERSION YP_002344773.1
DBLINK BioProject: PRJNA57587
Assembly: GCF_000009085.1
DBSOURCE REFSEQ: accession NC_002163.1
KEYWORDS RefSeq.
SOURCE Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
ORGANISM Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
Bacteria; Campylobacterota; Epsilonproteobacteria;
Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE 1
AUTHORS Gundogdu,O., Bentley,S.D., Holden,M.T., Parkhill,J., Dorrell,N. and
Wren,B.W.
TITLE Re-annotation and re-analysis of the Campylobacter jejuni NCTC11168
genome sequence
JOURNAL BMC Genomics 8, 162 (2007)
PUBMED 17565669
REMARK Publication Status: Online-Only
REFERENCE 2
AUTHORS Parkhill,J., Wren,B.W., Mungall,K., Ketley,J.M., Churcher,C.,
Basham,D., Chillingworth,T., Davies,R.M., Feltwell,T., Holroyd,S.,
Jagels,K., Karlyshev,A.V., Moule,S., Pallen,M.J., Penn,C.W.,
Quail,M.A., Rajandream,M.A., Rutherford,K.M., van Vliet,A.H.,
Whitehead,S. and Barrell,B.G.
TITLE The genome sequence of the food-borne pathogen Campylobacter jejuni
reveals hypervariable sequences
JOURNAL Nature 403 (6770), 665-668 (2000)
PUBMED 10688204
REFERENCE 3 (residues 1 to 474)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (12-DEC-2008) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 4 (residues 1 to 474)
AUTHORS Gundogdu,O.
TITLE Direct Submission
JOURNAL Submitted (07-AUG-2006) Submitted on behalf of the Campylobacter
sequencing team, Sanger Centre, Wellcome Trust Genome Campus,
Hinxton, Cambridge CB10 1SA. In Collaboration with the Pathogen
Molecular Biology Department at The London School of Hygiene &
Tropical Medicine, London, Keppel Street, WC1E 7HT.
E-mail:ozan.gundogdu@lshtm.ac.uk
REFERENCE 5 (residues 1 to 474)
AUTHORS Parkhill,J.
TITLE Direct Submission
JOURNAL Submitted (09-FEB-2000) Submitted on behalf of the Campylobacter
sequencing team, Sanger Centre, Wellcome Trust Genome Campus,
Hinxton, Cambridge CB10 1SA E-mail: parkhill@sanger.ac.uk
REMARK revised by [4]
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to CAL35497.
RefSeq Category: Reference Genome
FGS: First Genome sequenced
MOD: Model Organism
UPR: UniProt Genome
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..474
/organism="Campylobacter jejuni subsp. jejuni NCTC 11168 =
ATCC 700819"
/strain="NCTC 11168"
/sub_species="jejuni"
/db_xref="taxon:192222"
Protein 1..474
/product="catalase"
/EC_number="1.11.1.6"
/calculated_mol_wt=54192
Region 45..472
/region_name="catalase_clade_3"
/note="Clade 3 of the heme-binding enzyme catalase;
cd08156"
/db_xref="CDD:163712"
Site order(45,50,97..98,117..118,133..137,139,142,148..153,157,
160,224,227,230..231,235,238..239,242,265..266,271,273,
299,301..302,304,307,314..315,323,325,328,331..333,
336..337,340..342,344..345,347..350,354,358..359,361,364,
366..368,378..383,443..444,446,448,452)
/site_type="other"
/note="tetramer interface [polypeptide binding]"
/db_xref="CDD:163712"
Site order(52,90,124,129,137,330,334)
/site_type="other"
/note="heme binding pocket [chemical binding]"
/db_xref="CDD:163712"
Site order(127,170,174,177,179,189,211,213,278..281,418,
421..422)
/site_type="other"
/note="NADPH binding site [chemical binding]"
/db_xref="CDD:163712"
CDS 1..474
/gene="katA"
/locus_tag="Cj1385"
/coded_by="NC_002163.1:1322526..1323950"
/experiment="DESCRIPTION:Gene expression, mutation
analysis[PMID:7670638]"
/inference="protein motif:Pfam:PF00199"
/inference="protein motif:Prosite:PS00437"
/transl_table=11
/db_xref="GOA:Q59296"
/db_xref="HSSP:P42321"
/db_xref="InterPro:IPR002226"
/db_xref="InterPro:IPR011614"
/db_xref="UniProtKB/Swiss-Prot:Q59296"
/db_xref="GeneID:905678"
CONTIG join(WP_002856117.1:1..474)
ORIGIN
1 mkkltndfgn iiadnqnsls agakgpllmq dyllleklah qnreripert vhakgsgayg
61 eikitadlsa ytkakifqkg evtplflrfs tvageagaad aerdvrgfai kfytkegnwd
121 lvgnntptff irdaykfpdf ihtqkrdprt hlrsnnaawd fwslcpeslh qvtilmsdrg
181 ipasyrhmhg fgshtysfin dknerfwvkf hfktqqgikn ltnqeaaeli akdreshqrd
241 lynaienkdf pkwkvqvqil aekdieklgf npfdltkiwp hsfvplmdig emilnknpqn
301 yfneveqaaf spsnivpgig fspdkmlqar ifsypdaqry rigtnyhllp vnraksevnt
361 ynvagamnfd sykndaayye pnsydnspke dksylepdlv legvaqryap ldndfytqpr
421 alfnlmnddq ktqlfhniaa smegvdekii tralkhfeki spdyakgikk alek
//