GenomeNet

Database: RefSeq
Entry: YP_987025
LinkDB: YP_987025
Original site: YP_987025 
LOCUS       YP_987025                596 aa            linear   CON 10-JUN-2013
DEFINITION  acyl-CoA dehydrogenase domain-containing protein [Acidovorax sp.
            JS42].
ACCESSION   YP_987025
VERSION     YP_987025.1  GI:121595129
DBLINK      Project: 58427
            BioProject: PRJNA58427
DBSOURCE    REFSEQ: accession NC_008782.1
KEYWORDS    .
SOURCE      Acidovorax sp. JS42
  ORGANISM  Acidovorax sp. JS42
            Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
            Comamonadaceae; Acidovorax.
REFERENCE   1  (residues 1 to 596)
  AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
            del Rio,T., Dalin,E., Tice,H., Pitluck,S., Chertkov,O., Brettin,T.,
            Bruce,D., Han,C., Tapia,R., Gilna,P., Schmutz,J., Larimer,F.,
            Land,M., Hauser,L., Kyrpides,N., Kim,E., Stahl,D. and Richardson,P.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Complete sequence of Chromosome1 of Acidovorax sp. JS42
  JOURNAL   Unpublished
REFERENCE   2  (residues 1 to 596)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-JAN-2007) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 596)
  AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
            del Rio,T., Dalin,E., Tice,H., Pitluck,S., Chertkov,O., Brettin,T.,
            Bruce,D., Han,C., Tapia,R., Gilna,P., Schmutz,J., Larimer,F.,
            Land,M., Hauser,L., Kyrpides,N., Kim,E., Stahl,D. and Richardson,P.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (21-DEC-2006) US DOE Joint Genome Institute, 2800
            Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from ABM42949.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Acidovorax sp. JS42"
                     /strain="JS42"
                     /db_xref="taxon:232721"
     Protein         1..596
                     /product="acyl-CoA dehydrogenase domain-containing
                     protein"
                     /calculated_mol_wt=63145
     Region          1..585
                     /region_name="PTZ00456"
                     /note="acyl-CoA dehydrogenase; Provisional"
                     /db_xref="CDD:185635"
     Region          1..32
                     /region_name="AcylCoA_DH_N"
                     /note="Acyl-CoA dehydrogenase N terminal; pfam12418"
                     /db_xref="CDD:204911"
     Region          40..454
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:245208"
     Site            order(131,161,163,195,197,437..439,441,443)
                     /site_type="active"
                     /db_xref="CDD:173838"
     Region          <500..592
                     /region_name="Acyl-CoA_dh_C"
                     /note="Acetyl-CoA dehydrogenase C-terminal like;
                     pfam12806"
                     /db_xref="CDD:221782"
     CDS             1..596
                     /locus_tag="Ajs_2808"
                     /coded_by="complement(NC_008782.1:2970676..2972466)"
                     /note="PFAM: acyl-CoA dehydrogenase domain protein;
                     Acyl-CoA dehydrogenase, type 2, C-terminal domain;
                     KEGG: pol:Bpro_3141 acyl-CoA dehydrogenase-like"
                     /transl_table=11
                     /db_xref="InterPro:IPR006090"
                     /db_xref="InterPro:IPR006091"
                     /db_xref="InterPro:IPR013107"
                     /db_xref="GeneID:4674060"
CONTIG      join(WP_011805964.1:1..596)
ORIGIN      
        1 msytapvkdm lfaiehlari dqvaqipgfe dagldtaaav leecakfneg vvaplnvvgd
       61 ekpswfkdga vtttpgfkea fsqfaeggwq glqhpadfgg qglpktigaa cvemlnsanl
      121 sfalcplltd gaiealltag sdelkatyle klvtgewtgt mnltepqags dlalvrtkad
      181 pqpdgtykvf gtkifityge hdmaenivhl vlarvagape gvkgislfvv pkflvnqdgs
      241 lgarndvhcv siehkmgika sptavlqygd nggaigylvg eenrgleymf immnaaryav
      301 gvqgiavaer ayqkavqyar drvqsrpvdg svagsaaiih hpdvrrmlmt mraytegcra
      361 mattaaaayd aahhhpdaev rkqnavfyef mvplvkgyst emslevaslg vqvhggmgfi
      421 eetgaaqyyr dakiltiyeg ttaiqandlv grktardggq takaiaaqie ategelrasg
      481 tadaqavaqr laaarqafle vvdfiaggak ahpndvyags vpylmlagnl vagwqlaral
      541 lvaqelsakg qdvafmqaki atarfyadhl ltkapgqrda ivhgaasvta lpleaf
//
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