KEGG   Rhizobium etli bv. phaseoli IE4803: IE4803_CH00012
Entry
IE4803_CH00012    CDS       T03667                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
rep  Rhizobium etli bv. phaseoli IE4803
Brite
KEGG Orthology (KO) [BR:rep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rep03032]
    IE4803_CH00012 (gyrB)
   03400 DNA repair and recombination proteins [BR:rep03400]
    IE4803_CH00012 (gyrB)
Enzymes [BR:rep01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     IE4803_CH00012 (gyrB)
DNA replication proteins [BR:rep03032]
 Prokaryotic type
  DNA Topoisomerases
   IE4803_CH00012 (gyrB)
DNA repair and recombination proteins [BR:rep03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      IE4803_CH00012 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_insert GyrB_hook HATPase_c_3 Toprim_4
Other DBs
NCBI-ProteinID: AJC77288
Position
8269..10704
AA seq 811 aa
MSDTSATENGVSTEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDE
ALAGHADIVTVSLNPDGSVTVTDNGRGIPTDIHSGEGVSAAEVIMTQLHAGGKFDQNSYK
VSGGLHGVGVSVVNALSVWLKLKIRRHGKIHEMSFTHGVADAPLKVTGEAPDETGTEVSF
MPSSETFTMTEFDYGTLEHRLRELAFLNSGVRILLTDKRHSDIKQEELRYDGGLEAFVAY
LDRAKKSLVDKPVAIRGEKDGITVEVAMWWNDSYHENVLCFTNNIPQRDGGTHMAGFRAA
LTRQVVSYADNSGITKKEKVTLQGEDCREGLTAVLSVKVPDPKFSSQTKDKLVSSEVRPV
VESLVNEALSTWFEEHPSEAKILVGKVVEAAAAREAARKARELTRRKGALDIASLPGKLA
DCSERDPAKSEVFLVEGDSAGGSAKQGRSRENQAILPLRGKILNVERARFDKMLSSQEIG
TLITALGTGIGKDEFNAEKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPELIERGHLY
IAQPPLYKVARGKSVQYLKDEKALEEYLIGQGLEDAALRLGSGEVRTGQDLREVILDALR
MRALLDNLHSRYNRAVVEQAAIAGALNAELVSDQARAQALVSEVASRLDIIAEETERGWQ
GDLTSDGGLRLERMVRGVKEIVVLDMALIGSSDARHIDQLTSRLKEIYQTPPSLHRREGD
IEISGPRALLDAIFASGRKGLTMQRYKGLGEMNAEQLWETTLDPNVRSLLQVKVADATDA
DGLFARLMGDEVEPRREFIQDNALSVANLDI
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgagcgatacatccgcgacggaaaacggcgtaagcaccgaatatggcgcagattccatc
aaggtcctgaagggcctcgatgccgtgcgcaaacgccccggcatgtatatcggcgatacc
gacgacggctccggcctgcatcacatggtctatgaagtcgtcgacaacgccatcgacgaa
gcgctggccggccatgccgacatcgttaccgtcagcctcaatccggatggttcggtgacg
gtcaccgataacggccgcggcatcccgaccgacattcattccggcgaaggcgtgtcggcg
gccgaagtcatcatgacgcagctgcatgccggcggcaaattcgaccagaattcctacaag
gtctccggcggtctgcacggggtcggcgtttccgtcgtcaatgcgctttccgtctggctg
aagctgaagatccgacgccatggcaagattcatgaaatgagcttcactcatggcgtagcc
gacgcgccgctgaaggtcaccggcgaagcgccagacgagaccggcaccgaagtgagcttc
atgccgagcagcgaaaccttcaccatgacggagttcgactacggcacgctggagcatcgc
ctgcgcgagctcgccttcctcaactcgggcgtgcgcatcctgctgaccgataagcgccat
tccgatatcaagcaggaagaattgcgttatgacggcggcctcgaagctttcgtcgcctat
ctggaccgcgccaagaagtcgctcgtcgacaagccggtcgccatccgcggcgaaaaggac
ggcatcaccgtcgaagtggcgatgtggtggaacgacagctaccacgagaacgtgctctgc
ttcaccaacaacattccccagcgcgacggcggcacgcatatggccggcttccgcgcggcc
ttgacgcgccaggtggtgtcctatgccgataattccggcattaccaaaaaggaaaaggtg
acgctgcagggcgaagattgccgcgaaggtttgacggcggtcctgtcggtcaaggtgccc
gatccgaaattctcctcgcagaccaaggacaagctcgtttcctcggaagtccgtcccgtt
gtcgaaagtctcgtcaacgaggcgttgagcacctggttcgaagaacatccgagtgaagcc
aagatcctcgtcggcaaggtcgtcgaggcagcagccgcacgcgaggcagcccgcaaggcc
cgcgaattgacccgccgcaagggcgcgctcgatatcgcctcgctgcccggcaagcttgcc
gactgctccgagcgtgatccggcaaaatccgaagttttcctggtcgagggcgattccgcc
ggcggctcggccaagcagggccgttcgcgcgaaaaccaggcgatcctgccgctgcgcggc
aagatcctcaacgtcgaacgtgcccgtttcgacaagatgctgtcgagccaggaaatcggc
acattgatcacggcgctcggcaccggcatcggcaaggacgagttcaatgccgagaagctg
cgttatcacaagatcatcatcatgacggacgccgatgtcgacggcgcccatatccgcacg
ctgctgctcaccttcttcttccggcagatgccggagctgatcgagcgcggccatctctat
atcgcccagccgccgctctataaggtcgcgcgcggcaagtcggtgcagtatctgaaggac
gaaaaggcgcttgaggaatatctgatcggccagggtctagaagatgcggcgctgcggctc
ggcagtggcgaggtccgcaccggtcaggatctgcgcgaagtcattctcgatgcgctgcgt
atgcgcgctctgctcgacaacctccattcgcgttacaatcgcgccgtcgtcgagcaggcg
gcaattgccggcgcgctcaacgccgaactcgtcagtgaccaggcaagagcccaggcattg
gtaagcgaagttgcaagccgtctcgatattatcgccgaggaaaccgagcgcggctggcag
ggcgatctgaccagcgatggcggcctgcgccttgaacgcatggtccgcggtgtcaaggaa
atcgtcgtgctcgatatggcgctgatcggctcctcggacgcccggcacatcgatcagctg
acgtcacgtctcaaggaaatctaccagacgccgccgtcgctgcatcggcgcgaaggcgac
atcgagatttcggggccgcgcgccctgctcgacgcgatcttcgccagcggccgcaagggc
ctcaccatgcagcgctacaaggggctcggcgagatgaatgccgaacagctctgggaaacg
acgctcgatccgaacgtccgttcgctgctgcaggtcaaggtcgcggacgccaccgatgcc
gatggtctcttcgcccgcctgatgggtgacgaggtcgagccgcggcgcgaattcatccag
gacaacgcgctgagcgtcgcaaacctcgatatctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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