KEGG   Prescottella equi: REQ_15060
Entry
REQ_15060         CDS       T01352                                 
Name
(GenBank) putative DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
req  Prescottella equi
Pathway
req03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:req00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    REQ_15060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:req03019]
    REQ_15060
   03009 Ribosome biogenesis [BR:req03009]
    REQ_15060
Enzymes [BR:req01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     REQ_15060
Messenger RNA biogenesis [BR:req03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     REQ_15060
Ribosome biogenesis [BR:req03009]
 Prokaryotic type
  rRNA helicases
   REQ_15060
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 UvrA_inter HEM4
Other DBs
NCBI-ProteinID: CBH47584
UniProt: A0A3S5Y4S3
Position
1567016..1568848
AA seq 610 aa
MSDTERDPQTDDNPITFADLQIDERVLKALSDVGYESPSPIQAATIPTLLEGKDVVGLAQ
TGTGKTAAFAIPILSRLDVDRKVPQALILAPTRELALQVAEAFGKYSAHIPGLQVLPIYG
GQAYGVQLSGLRRGAQIIVGTPGRVIDHLEKGTLDLSNLEYLVLDEADEMLKMGFQDDVE
RILADTPEYKQVALFSATMPPAIRKISKQYLHDPVEITVKAKTATASNITQRWVQVAHQR
KLDALTRILEVESFEAMIIFVRTKQATEDLAERLRARGFSAAAINGDIVQAQRERTIGQL
KSGALDILVATDVAARGLDVDRISHVVNYDIPHDTESYVHRIGRTGRAGRTGDALLFVAP
RERHLLKSIERTTRQPLTEIQLPTVEDVNAQRVSKFGDSITESLNSENLALFRKLIEDYE
REHDVPLADIAAALAVQSRDGESFLMAPEPPAPPRREREPRERPARRFDDGGPSGPRVGR
DGQEFATYRIAVGKRHKVVPGAIVGAIANEGGLRRSDFGHISIRPDHSLVELPANLPKET
VEALRATRISGVLIQLQLDQGAPTGRQGRGGREDRAGGKFSRDRGDRGHRGDRGDRGDRG
DRFAKRRPRD
NT seq 1833 nt   +upstreamnt  +downstreamnt
atgagtgacaccgagcgcgacccgcagaccgacgacaatcccatcaccttcgccgacctc
cagatcgacgaacgggtgctgaaggccctttccgacgtcggctacgagtcgccctcgccg
atccaggccgcgaccatcccgacgctgctcgaaggtaaggacgtcgtcggcctggcccag
acgggtaccggcaagacggccgcgttcgcgattccgatcctgtcccgcctcgacgtcgac
cggaaggtgccccaggcgctgatcctggcgccgacccgcgagctcgcgctgcaggtcgcg
gaggcgttcggcaagtactcggcacacatcccgggtctgcaggtgctgccgatctacggc
ggtcaggcgtacggcgtccagctgtcgggcctgcggcgcggcgcccagatcatcgtcggt
acgcccggccgcgtgatcgaccatctcgagaagggcaccctcgacctctccaacctcgag
tacctcgtgctcgacgaggctgacgagatgctcaagatgggcttccaggacgatgtcgag
cggatcctcgccgacacgcccgagtacaagcaggtcgcactgttctccgcgacgatgccg
ccggcgatccgcaagatctccaagcagtacctgcacgatcccgtcgagatcaccgtcaag
gcgaagaccgcgacggcgtcgaacatcacccagcgctgggtgcaggtcgcgcatcagcgc
aagctcgacgcgctcacccgcatcctcgaggtcgagtcgttcgaggcgatgatcatcttc
gtccggaccaagcaggccaccgaggatctcgccgagcgcctgcgggcccgcggcttctcg
gccgccgcgatcaacggcgacatcgtgcaggcgcagcgcgagcgcacgatcggtcagctc
aagtccggtgcgctcgacatcctcgtcgccaccgacgtcgcggctcgcggcctggacgtc
gaccggatctcgcacgtcgtcaactacgacatcccgcacgacaccgagtcgtacgtgcac
cgcatcgggcgcaccggtcgcgcgggccgcaccggtgatgcgctgctgttcgtcgcgccc
cgcgagcggcacctgctcaagtcgatcgagcgcaccacgcggcagccgctcaccgagatt
cagctgccgaccgtcgaggatgtcaacgcgcagcgcgtctcgaagttcggcgactccatc
accgagagcctgaactccgagaacctggcgctgttccgcaagctcatcgaggactacgag
cgcgagcacgacgtcccgctcgccgacatcgccgccgcgctggcggtgcagtcgcgcgac
ggcgagtcgttcctcatggcgccggagccgccggccccgccgcgccgcgagcgtgagccg
cgggagcggccggcccgccgattcgacgacggcggtccgagtggcccgcgcgtcggtcgt
gacggccaggagttcgcgacgtaccggatcgcggtcggcaagcggcacaaggtcgtcccg
ggtgcgatcgtcggtgcgatcgccaacgagggtgggctgcgccgcagcgacttcgggcac
atcagcatccgacccgaccacagcctggtcgagctgccggcgaacctgccgaaggagacc
gtcgaggcgctgcgggccacccgcatctcgggtgtgctgatccagctgcaactcgaccag
ggtgcgccgacgggacggcagggccgcgggggacgcgaggaccgcgcgggcggcaagttc
agccgcgaccgcggcgaccgcggtcatcgtggtgaccgtggtgatcggggcgaccggggt
gaccgattcgcgaagcgtcgtccgcgcgactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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