KEGG   Prescottella equi: REQ_21720
Entry
REQ_21720         CDS       T01352                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase omega subunit RpoZ
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
req  Prescottella equi
Pathway
req03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:req00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    REQ_21720 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:req03021]
    REQ_21720 (rpoZ)
   03400 DNA repair and recombination proteins [BR:req03400]
    REQ_21720 (rpoZ)
Enzymes [BR:req01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     REQ_21720 (rpoZ)
Transcription machinery [BR:req03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     REQ_21720 (rpoZ)
DNA repair and recombination proteins [BR:req03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      REQ_21720 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: CBH48225
UniProt: A0A3S5Y6N9
Position
2293524..2293829
AA seq 101 aa
MSSTEAVVSDTAGRGALPAYDTPLGITNPPIDELLERTSSKYALVIYSAKRARQINDYYN
QLGDGILEYVGPLVEPGLQEKPLSIALREIHADLLEHTEGE
NT seq 306 nt   +upstreamnt  +downstreamnt
gtgagcagcaccgaagcagttgtgtccgacaccgcaggtcggggcgccctgcctgcctac
gacaccccgctcggcatcaccaacccgccgatcgacgagttgctcgagcgcacgtcgtcg
aagtacgccctggtcatctactcggccaagcgtgcccgtcagatcaacgactactacaac
cagctcggtgacggcatcctcgagtacgtcggcccgctcgtcgagccgggtctgcaggag
aagccgctgtcgatcgcgctgcgcgagatccacgccgacctcctcgagcacaccgaaggc
gagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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