KEGG   Rhodococcus fascians D188: A3L23_00923
Entry
A3L23_00923       CDS       T04328                                 
Symbol
nei1_2
Name
(GenBank) Endonuclease 8 1
  KO
K05522  endonuclease VIII [EC:3.2.2.- 4.2.99.18]
Organism
rfa  Rhodococcus fascians D188
Pathway
rfa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rfa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    A3L23_00923 (nei1_2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rfa03400]
    A3L23_00923 (nei1_2)
Enzymes [BR:rfa01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     A3L23_00923 (nei1_2)
DNA repair and recombination proteins [BR:rfa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     A3L23_00923 (nei1_2)
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS
Other DBs
NCBI-ProteinID: AMY52276
UniProt: A0A165L939
Position
complement(996846..997649)
AA seq 267 aa
MPEGDTVHALAARLRRALDGVTLRAGRLNVPAHAVENLAGRTVVAHRTHGKHLFTDFDDD
TTLHTHLRMTGSWSVVRAGRSIPRRVQPDVRVRLAAVDGPTAYGILLPVVDYGYTASMNA
LVAHLGPDPLHAEFDTDRAASNILAQGSRPIVSTLLDQRVIAGPGNLWANELCFLRGLWP
WAPSAGVDAEKLVTLLERAMRHSASTPGAIQVTTGDTRRGRTHWVAGRAGKPCLRCATVI
RVEADVPNDPDRRRTWWCPHCQPEPGL
NT seq 804 nt   +upstreamnt  +downstreamnt
atgcccgaaggtgacaccgtccatgcgctcgccgcgcgattgcggcgagcgctggacggc
gtcacgctacgggcagggcgactgaacgtgcccgcacacgccgtcgagaatctcgccggg
cgaaccgtcgtcgcgcaccggacgcacggcaagcatctgttcaccgatttcgacgacgac
accacgttgcacacccacctccgcatgacgggatcgtggtcggtggtgcgagccggccgc
tcgataccgcggcgggtgcagcccgacgtccgggtgcggctggccgcggtggacgggccg
accgcgtacggaatcctgttgccggtcgtcgactacgggtacacggcctcgatgaatgcg
ctggtcgcgcatctgggaccggacccattgcatgccgagttcgacaccgatcgtgcggca
tcgaacatcctcgcgcagggttctcggccgatcgtctcgaccctcctggatcagcgggtc
atcgcggggcccggaaatctatgggcgaacgagctgtgttttctgcgtggactgtggccc
tgggctccgtcggcaggcgtcgacgcggagaaattggtgactctgctcgagcgggcgatg
cggcattcggcgagcacccccggggccatacaggtcaccaccggcgacactcgtcgcggc
cggacccactgggttgccggtcgggccggtaaaccgtgtctgcggtgcgcgaccgtcatt
cgtgtcgaggccgacgtgccgaacgaccccgatcgacgtcgaacatggtggtgtccgcac
tgccagccggagccagggctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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