KEGG   Reinekea forsetii: REIFOR_02557
Entry
REIFOR_02557      CDS       T05208                                 
Name
(GenBank) exoribonuclease R
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
rfo  Reinekea forsetii
Brite
KEGG Orthology (KO) [BR:rfo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rfo03016]
    REIFOR_02557
Enzymes [BR:rfo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     REIFOR_02557
Transfer RNA biogenesis [BR:rfo03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    REIFOR_02557
SSDB
Motif
Pfam: RNB CSD2 OB_RNB S1 CSD
Other DBs
NCBI-ProteinID: ATX77682
UniProt: A0A2K8KST7
Position
2780166..2782067
AA seq 633 aa
MLDAKSLELLQSLKTDITASKPVLQGLIKGTGKSFGFVTCPNGDEYFVPPDDMAKVLPGD
EVTFTVTELADGKTRAELESLVASSIDEFCGIYHVRGKAQGVEPFNSAFSGWLFVPPKQT
LEAGNNEMVVAKLRRHPWETGKAQAEIIRLLGSADNNRSWYSLAIQEHRLEETFSAPELA
EAEALCQGQLAPQSDYVDLTDRPFVTIDSASTQDMDDALHAQSTGDGWLLSVAIADASLF
VTPGSLLDLAARRRLSTTYLPGLTLPMVPEVLANGAMSLQPDCQRPALVFELSIAADGAV
TDLRVQTAHVRSRGKLSYADVALWLTDTNLLPADYQQLLPLQQATSAMAGWRRQHGNPMQ
DRPDYRVRVDNDFRVTAVDKETRDVAREIVEESMIATNASVANWLKADSALFMTHRGFKP
DRETELKGLLRDTVAEVANLNGHDLTDFRTIMAAAAGLADFPLLTVLQKRFDRGAWSNSA
AAHFGLGLEQYTTVTSPIRKYSDLTTHRLIKAKLLNQPLQIAEDLVSDLNERGNIPRQVG
NLIENKLRLQWLAQQPDQVWHATVVHVTAIGLIAQLDDNGASGLIDMRRKKDDYSHDALR
MVLKFADHTYQLGEALQVRVARIEDDKMMLALV
NT seq 1902 nt   +upstreamnt  +downstreamnt
atgttagatgcaaaatcccttgaactgctccagtccctgaaaaccgacataacagccagt
aagccggtcttgcaaggcttgatcaagggcaccggtaaatcctttggctttgtaacctgc
cccaatggtgacgaatactttgtgccgcccgatgatatggccaaggtcttacccggggat
gaggtgacctttaccgtgactgagctggccgacggtaagacccgcgcggagctggaaagc
ctggtggcctcatcgatcgacgaattctgtggcatctatcatgtgcgcggcaaggcgcag
ggcgtggaaccctttaattcagccttctccggttggttatttgtaccccctaagcaaacc
ttagaagccggtaacaatgaaatggtcgttgccaaactgcgccgccacccgtgggagacc
ggtaaggcgcaagccgagattatccgcctgttgggcagtgccgataacaatcgctcctgg
tacagcttggcgatccaggaacatcgtttagaagagaccttctctgcccctgaattggcc
gaagccgaggctctatgtcagggccagctagcgccgcagagcgactatgtcgatctcacc
gatcggcccttcgtcaccatcgattcagcctcgacccaagatatggacgatgcgctgcat
gctcagagcactggtgacggttggctcttatcggtggctatcgccgatgcctcgctcttt
gtcacgcccggctcgctgctcgatctggccgcccggcggcgtttgagcaccacctatttg
cccggcctgaccctgcccatggtgcccgaggtgctggccaacggtgccatgtcgttgcag
ccggattgccaacgtccggccttggtgtttgaactgagtatcgcggccgatggtgccgtt
accgacctgcgagttcagacggcgcatgtgcgcagtcgtggcaagctcagctatgccgat
gtcgcgctctggttgaccgacactaacctgttaccggcagactaccagcaattgctgccc
ttgcaacaggctacctcggcgatggccggttggcgtcgacagcatggtaacccgatgcaa
gatcgcccggattaccgtgtgcgggtcgataatgacttcagagtaaccgctgttgataag
gaaacacgtgatgtggcgcgcgagattgtggaagagtccatgattgccaccaatgcgtcg
gtcgccaactggcttaaggccgactcggcgctgtttatgacgcaccgcggcttcaaaccc
gatcgtgaaaccgagttgaagggcctattgcgcgataccgtcgcggaagtggccaacctc
aacggccacgacctgacggacttccgcaccataatggcggcggcggctggcttggccgac
ttccccctcttaaccgtgctgcagaaacgcttcgaccggggcgcctggtcgaacagtgct
gcggcccactttggcctgggattggagcaatacaccaccgtcacctcgccgattcgtaaa
tacagcgacctgaccacccatcgactgattaaagccaagctgttaaaccagccgctgcag
attgcagaggatctggtcagcgacctcaatgagcgcggcaatataccgcgtcaagtgggc
aatctgatcgaaaataaactgcgtttgcagtggttagcgcaacagcccgaccaggtctgg
catgccaccgtcgtgcatgtcaccgccatcggccttattgcccagctcgatgacaatggc
gcctccggcctaatcgatatgcgccgcaaaaaggatgactatagccatgatgccttgcgc
atggtgctcaagtttgccgatcatacctatcagttaggcgaggcgttgcaggttagggtc
gcccggatcgaagacgataagatgatgctcgcgttggtctaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (30)   

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