KEGG   Reinekea forsetii: REIFOR_02881
Entry
REIFOR_02881      CDS       T05208                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
rfo  Reinekea forsetii
Pathway
rfo03030  DNA replication
rfo03410  Base excision repair
rfo03420  Nucleotide excision repair
rfo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rfo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    REIFOR_02881
   03410 Base excision repair
    REIFOR_02881
   03420 Nucleotide excision repair
    REIFOR_02881
   03440 Homologous recombination
    REIFOR_02881
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rfo03032]
    REIFOR_02881
   03400 DNA repair and recombination proteins [BR:rfo03400]
    REIFOR_02881
Enzymes [BR:rfo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     REIFOR_02881
DNA replication proteins [BR:rfo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     REIFOR_02881
DNA repair and recombination proteins [BR:rfo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     REIFOR_02881
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     REIFOR_02881
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_5 HHH
Other DBs
NCBI-ProteinID: ATX78002
UniProt: A0A2K8KTR0
Position
complement(3143159..3145957)
AA seq 932 aa
MVNNSTPVVLVDGSSYLFRAYHALPPLANAAGMQTGAIKGVVSMLRKLIEAYPSSPVVVV
FDAKGPTFRNEMYDQYKANRPPMPEELRAQIAPIHETVRAMGLPLLCIAGVEADDVIGTL
AEQATQQGRDCVISTGDKDMAQLVSAHVSLINTMNNEYLDVAGVGKKYGFGPERMIDYLA
LMGDKVDNIPGVPGVGEKTALALIQGLGGLDDIYGRLDEIAGLTFRGAKNMAAKLAEHRE
SAYMSYQLATIKLDVALDLGVQEYQTEAADKDALLALFEQFQFRSWIRDLTDGASPTASP
TASARPEPVSAVLPELVVPSACDYRVVEHLDELAAIIASAEQTRQLAYLPVLAKGHYRDP
VWIGLALATEPGRAWYLPFSAEDQPALPAAEVLAQLAPLWSAHAIVKTGFDIKADHHWFH
TLGWTPARLAKDVQLMAFVYDSTLKRDKSLSNHFANLSIDNLAICYLQQAPQTIEYFLGS
AGKRQLAASAVKADVIGPWWAERCDLLLRLGARFEQGLASRNLTRVYDQIERPLSSALAL
IERNGVVLDIDFINDLSVQFKARLATIEQQAHNIAGTTFNVDSPKQLAEILFEKMGLPVL
VKTANGAPSTNEEVLSDLAEDYELPRLILQSRHLRKLVGTYTDPLPILAQADARANYRLH
TTYNQTGAQTGRLSSNDPNLQNIPVRTDEGRSIRKAFIAPLNYQIVAADYSQIELRIMTH
LSQDANLIAAFQEGKDIHRATAADVMGVPESEVTTEQRRSAKAINFGLIYGMSAFGLAKQ
LGISRTEAKAYVDAYFERYPGVRRYMDETRAEAAETGYVETVFGRRLYLPGLQSSNQMVR
KGAERTAINAPMQGTAADIIKMAMVDVGNWLAASRLRAKMIMQVHDELVFEVHQDDQAAL
IAGVRFRMQHCANLDVPLIVDIDSGPSWESAH
NT seq 2799 nt   +upstreamnt  +downstreamnt
atggttaacaattcaacacctgtggtgctcgtcgatggttcgtcctacctgtttcgcgcc
tatcatgcactcccaccgctggccaacgccgctggcatgcagaccggtgcgatcaagggt
gttgtctcgatgttacgcaagctgatcgaagcctatccgtcgagcccggtggtcgtggtg
ttcgatgccaagggcccaaccttccgcaacgagatgtacgatcaatacaaggccaatcgg
ccgcccatgcccgaggagttgcgcgcacagattgcgccgatccacgagacggtccgggcc
atgggtttgccgctgctgtgtatcgccggcgtcgaggccgatgatgtgatcggcaccctg
gccgagcaggccacgcaacagggtcgcgattgcgtcatcagcaccggcgataaggacatg
gcacagctggtcagcgcgcatgtttcgctgatcaataccatgaacaacgaatacctggat
gtcgccggcgtcggcaaaaaatacggtttcggcccggagcggatgatcgattacctggcc
ctgatgggtgataaggtcgacaacattcccggcgtgcccggcgtgggcgaaaagaccgcc
ctggctctgattcaaggcctgggtgggcttgatgatatctatggtcgcttagacgagatc
gctggcctgaccttccgcggtgctaaaaatatggccgccaagttagccgagcaccgcgag
tcggcttatatgagttatcagctggcgaccattaaactcgatgttgcgctcgatctaggg
gtgcaggaatatcagaccgaggccgcggataaggacgcgctgttggctctgtttgaacag
tttcagtttcgctcctggattcgcgatctgaccgatggcgccagcccgaccgccagcccg
actgcgagcgctcggccggaaccggtatcggccgtgttacctgagctcgtcgtgcccagc
gcatgcgactatcgggtggtggaacacctcgacgagttggcggccattatcgcctcggcc
gaacagactcgccagctggcctatttgccggttctggccaagggccactatcgggatccg
gtttggattggtttggcgctggccaccgaaccgggccgcgcctggtatctgccgttcagt
gccgaagatcagccggcgctgccggcggccgaggtgctggctcagttagcgccactctgg
tcggcccatgcaattgtcaaaaccggcttcgacatcaaggccgatcatcattggtttcac
accttgggctggaccccagcgcggctggcgaaagatgttcagctgatggcctttgtctac
gacagcacgctcaaacgcgataagagtctgagcaaccactttgccaatttgtcgatcgac
aatctggcgatctgttatttacagcaggcgccgcagactattgaatatttcttgggcagc
gccggcaaacggcagttggcagcgagcgcggtcaaggccgatgtcatcggcccctggtgg
gccgaacgctgtgatttgctgttgcgccttggcgcgcgcttcgaacagggcttggccagt
cgcaacctgacccgggtctatgatcagattgaacgcccgctgtcgtcggctttggcgcta
atcgagcgcaacggcgtagtgctcgatatagattttatcaacgatctcagcgtgcagttt
aaggcccgtttggcgaccatcgagcagcaggcgcacaatatagcgggcaccacctttaac
gtcgactcgcccaagcagttggccgaaatcctgttcgaaaagatggggttgccggtgttg
gttaagaccgccaatggcgcgccgtcgaccaatgaagaggtgctcagtgatctggccgaa
gactacgaactgcccaggctgatcttgcagtcgcgccatttgcgtaagctggtgggtacc
tataccgacccgttacccatcttggcgcaagccgatgctcgggcaaactaccggctgcac
accacctataaccagaccggtgcgcaaaccgggcgattaagttctaacgatcccaatttg
caaaatattcccgtgcgcaccgatgagggccgctcgattcgtaaggcctttatcgcaccg
ctaaattatcagatcgttgcggctgactattcgcaaattgaattacgcatcatgacccac
ctgagtcaggatgcgaatctgattgccgcgttccaagagggtaaggatatccaccgtgcc
accgcggccgatgtcatgggcgtcccggaaagcgaggtcaccaccgagcaacgtcgctcg
gctaaagcgatcaacttcggtttgatttatggcatgtccgcctttggtttggccaaacag
ttgggcatcagtcgcaccgaggccaaggcctatgtcgatgcctactttgagcgctatccc
ggggtgcggcgttatatggatgaaacccgtgccgaagctgccgaaaccggctatgtcgaa
acggtctttggccgtcggctctatttaccgggtctacagtcgtccaatcagatggtacgc
aagggcgctgaacgcaccgctattaatgctccgatgcagggtaccgcagccgacatcatc
aagatggccatggtcgatgtcggtaattggttagcggccagtcgtttgcgcgcgaaaatg
attatgcaggtgcacgatgaattggtatttgaagtccaccaagacgatcaggcggccctg
atagccggggtgcggtttcgcatgcaacactgtgccaatctggatgtgccactgatcgtc
gatattgatagcggcccatcttgggagtcggcgcactaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (32)   

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